Embiotoca jacksoni (black perch): 138215576
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Entry
138215576 CDS
T10523
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja03030
DNA replication
eja03410
Base excision repair
eja03420
Nucleotide excision repair
eja03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
138215576 (rfc2)
03410 Base excision repair
138215576 (rfc2)
03420 Nucleotide excision repair
138215576 (rfc2)
03430 Mismatch repair
138215576 (rfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eja03032
]
138215576 (rfc2)
03036 Chromosome and associated proteins [BR:
eja03036
]
138215576 (rfc2)
03400 DNA repair and recombination proteins [BR:
eja03400
]
138215576 (rfc2)
DNA replication proteins [BR:
eja03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
138215576 (rfc2)
DNA Replication Termination Factors
ELG1-RFC complex
138215576 (rfc2)
Chromosome and associated proteins [BR:
eja03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
138215576 (rfc2)
DNA repair and recombination proteins [BR:
eja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
138215576 (rfc2)
Check point factors
HRAD17(Rad24)-RFC complex
138215576 (rfc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
RCF1-5-like_lid
AAA_14
AAA_16
Rad17
AAA_24
Mg_chelatase
Viral_helicase1
AAA_11
AAA_18
RuvB_N
AAA_19
DEAD
nSTAND3
AAA_5
AAA_assoc_2
MipZ
MeaB
ABC_tran
DNAX_ATPase_lid
AAA_30
PPR_1
AAA_28
NTPase_1
AAA_25
RNA_helicase
AAA_23
SLFN-g3_helicase
T2SSE
AAA_2
bpMoxR
FtsK_SpoIIIE
DUF815
Motif
Other DBs
NCBI-GeneID:
138215576
NCBI-ProteinID:
XP_069033920
LinkDB
All DBs
Position
Unknown
AA seq
349 aa
AA seq
DB search
MDVEVEVEQRPKTDTEAAEPPSRSSGSAYELPWVEKYRPLKLNEIVGNEETVSRLEVFAR
EGNVPNIIIAGPPGTGKTTSILCLSRALLGASMKDAVLELNASNDRGIDVVRNKIKMFAQ
QKVTLPKGRHKIIILDEADSMTDGAQQALRRIMEIYSKTTRFALACNASDKIIEPIQSRC
AVLRYSRLTDGQVLTRLQDVVEKERLAVSDDGLEAVIFTAQGDMRQALNNLQSTNSGFGY
INSDNVFKVCDEPHPLLVKSMLGHCVDGNVDEAYKVVEQLWALGYSPEDIIGNVFRVCKT
FHMAEYLKLEFIKEIGYTHMRVTEGVNSLLQMAGLVARLCSRTAPPAAS
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggaggtggaggtggagcagaggccgaagacggacacggaggccgccgagccc
ccgtcacggagctccgggagcgcctacgagctgccctgggtggagaagtaccggccgctg
aagctcaacgagatcgtgggaaacgaggagacggtgagccggctggaagtgttcgcccgc
gaggggaacgtcccaaacatcatcatcgcaggtcctcctggaacaggaaagacgaccagc
atcctgtgtctgtcccgggctctgctgggagcctcgatgaaggacgccgtgctggagctg
aacgcctccaacgacaggggaatcgacgtggtgaggaacaagatcaagatgtttgctcag
cagaaagtcactctacctaaaggacgacacaagatcatcatcctggatgaagcggacagc
atgacggacggcgcccagcaggccctgcggaggatcatggagatctactcgaagacgacc
cgcttcgctctcgcctgcaacgcgtccgataagatcatcgagccgatccagtcgcgctgc
gccgtgctgcgctactccaggctgacggacggacaggtcctgacccggctgcaggacgtg
gtggagaaggagcgcctggccgtgtccgacgacgggctggaggccgtcatcttcaccgcc
cagggggacatgagacaggcgctgaacaacctgcagtccaccaactcgggcttcggatac
atcaacagcgacaacgtgttcaaggtgtgcgacgagccccacccgctgctggtgaaaagc
atgctgggacactgcgtggacgggaacgtggacgaggcctacaaggtggtggagcagctg
tgggcgctgggctactcccccgaggacatcatcgggaacgtcttcagggtctgcaagacc
ttccacatggccgagtacctcaagctggagttcatcaaggagatcggctacacgcacatg
cgggtgactgaaggagtgaactctctgctgcagatggccggcctggtggctcggctgtgc
agccgcacggcgccccctgctgccagctga
DBGET
integrated database retrieval system
