Embiotoca jacksoni (black perch): 138215930
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Entry
138215930 CDS
T10523
Symbol
usp39
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 39
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138215930 (usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eja03041
]
138215930 (usp39)
Spliceosome [BR:
eja03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
138215930 (usp39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
138215930
NCBI-ProteinID:
XP_069034549
LinkDB
All DBs
Position
Unknown
AA seq
502 aa
AA seq
DB search
MVSLKREREREPEVDDDDNEDGVVAKTGRGRVVEDRRSRHCPYLDTINRSVLDFDFEKLC
SISLSHINVYACLICGKYFQGRGLKSHAYTHSVQFTHHVFLNLHTLKFYCLPDNYEIIDS
SLEDITYVLKPTFTKQHIAGLDKQGKLYRAYDGTTYLPGIVGLNNIKANDYANVVLQAFS
NVPPLRNYFLEEENYREIRRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVV
LCSKKNFQITKQGDAVDFMTWFLNALHGALGGTKKKPSIITKAFQGSMRIFSKKLPHPDL
LPEEKEALLVTEEYQEQMSESTFLFLTLDLPTAPLYKDEKEQLIIPQVPLFNILGKFNGS
TEKEYKTYKENFLKKFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLT
EESQATEKNTTYDLVANIVHDGKPTEGAYRIHVLHHGTGKWYEMQDLQVTDILPQMITLS
EAYIQIWKRQESDEDTNNHTGV
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggtttctttgaagcgagagcgcgagagggagcccgaggtggacgatgacgacaacgaa
gacggagtggtggccaaaacaggtcgagggcgagtcgtagaagaccggaggagccgccac
tgtccttatctcgacaccataaacaggagcgtgctggattttgacttcgagaagctctgc
tccatctccctctcccacatcaacgtctacgcctgccttatatgtgggaaatactttcaa
ggtagaggtctgaagtctcacgcttacactcacagtgtgcagttcacccaccacgtgttc
ctcaacctgcacacactcaagttttactgtctgccagataactacgagatcatcgactcg
tcactggaagacatcacgtatgtgttgaagccaactttcaccaagcagcacattgcagga
ctggacaagcagggcaaactgtacagagcctacgatggtacaacctacctgccaggcatc
gtggggctcaacaacatcaaagccaacgactatgccaacgtggtgttacaggctttttcc
aatgttccaccgctacgaaactacttcctcgaggaggaaaactacagagaaatccgacgg
ccaccaggagatatcatgtttctcttggtgcagcggtttggtgagctgatgcgcaaactt
tggaatccgcgaaacttcaaggcccatgtgtctccacatgagatgctgcaggctgtagtg
ttgtgcagcaagaagaacttccaaatcaccaagcaaggcgatgctgtggacttcatgacg
tggttcttgaatgctctgcatggcgctcttggaggcacaaagaaaaaaccatcaatcatt
acaaaagcttttcaaggctccatgcggattttctccaagaagctcccacacccagattta
ctgccagaggaaaaagaggcgctgcttgtgacagaggagtaccaggagcagatgtcagag
tccaccttcctgtttctgacccttgacctcccaacagctccgctgtacaaggacgagaag
gagcagcttatcatcccgcaggtccctctcttcaacatcctgggcaagttcaatggcagc
acagagaaggaatacaaaacctacaaagagaattttctcaaaaagttccagctgaccaaa
ctgccaccgtacctcatcttttgcatcaaaagattcaccaagaacaacttctttgtggaa
aagaaccccacaattgtcaacttccccatcacgaatgtagaccttcgtgagtacttgaca
gaggaatctcaagctacagagaagaacacaacgtatgaccttgttgcaaacatagtgcat
gatgggaaacccaccgagggagcgtacaggatacatgtcctgcatcatgggactgggaag
tggtacgagatgcaggacctgcaggtgaccgacattctcccccagatgatcacactgtca
gaggcttacatccagatctggaagagacaagagagtgatgaagacacaaacaaccacacg
ggggtgtaa
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