Eumetopias jubatus (Steller sea lion): 114200731
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Entry
114200731 CDS
T07240
Symbol
YTHDC2
Name
(RefSeq) 3'-5' RNA helicase YTHDC2
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
eju
Eumetopias jubatus (Steller sea lion)
Brite
KEGG Orthology (KO) [BR:
eju00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eju03041
]
114200731 (YTHDC2)
Enzymes [BR:
eju01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
114200731 (YTHDC2)
Spliceosome [BR:
eju03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
114200731 (YTHDC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
OB_NTP_bind
Helicase_C
HA2_C
R3H
DEAD
Ank_2
AAA_19
HA2_N
nSTAND3
AAA_22
Ank
ATPase
PhoH
AAA_7
AAA_16
AAA_23
UvrD-helicase
AAA_29
T2SSE
ABC_tran
SRP54
Motif
Other DBs
NCBI-GeneID:
114200731
NCBI-ProteinID:
XP_027948824
LinkDB
All DBs
Position
Unknown
AA seq
1450 aa
AA seq
DB search
MDRPPAGLAARPRGELPRAMFRPSSVSPRPPVAGGGGGGGGPAQFGPGGGGRAKGLKDIR
VDEEVKIAVNIALERFLCGDQREMEFPSSFTSTERAFVHRLSQSLGLVSKSKGKGANRYL
TVKKKDGSETAHAMMTCNLTHNSKHAVRSLIQRFPVTNKERTELLPKTERGNVFAVEAEN
WEMSKTSWGLNNGIPQIPVKRGESEFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGS
GKTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLES
RVSPKTLLTFCTNGILLRTLMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHP
TLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMFLEDILRTTGYTNKEMLKYKKE
KQREEKQQTTLTEWYSAQENTFKPESQRQRTVPNVTEEYDLLDDGGDAVFSQLTEKDVNC
LEPWLIKEMDACLSDIWLHKDVDAFAQVFHLILTENVSVDYRHSETSATALMVAAGRGFS
SQVEQLISMGANVHSKASNGWMALDWAKHFGQTEIVDLLESYSASLEFGNLDESSLVHTN
GSDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLYNICHGCDAGAILIFLPGYDEIVGLKD
RILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDV
VFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNM
LEFQTPELLRVPLQELCLHTKLLAPVNCPIADFLMKAPEPPPALIVRNAIQMLKTIDAMD
AWEDLTELGYHLADLPMEPHLGKMVLCAVVLKCLDPILTIACTLASRDPFVLPAQASQRR
AAMLCRKRFAAGTCSDHMALLRAFQAWQKARCDGWERAFCEKNFLSQATMEIIIGMRTQL
LGQLRASGFIRARGGGDIRDVNTNSENWAVVKAALVAGMYPNLVHVDRENVVLTGPKEKK
VRFHPTSVLSQPQYKKIPPANGQAAAIQALPTDWLIYDEMTRAHRIANIRCCSAVTPVTV
LVFCGPVRLARNALQKPSSFQADGIPNDSSDSEMEDRTTANLAALKLDEWLNFKLEPEAA
SLLLHLRQKWHSLFLRRMRAPSKPWSQVDEATTRAIIAVLSTEEQSACLQQPSGIGQRPR
PMSSEELPLASSWRSNNSRKTSADTEFSDESATAERVLMKSPSPALHPPQKYKDRGILHP
KRSTDDRSDQSSVKSTDSSSYPSPCASPSPPSLGKGSKSPSPRPNMPTRYFIMKSSNLRN
LEISQQKGIWSTTPSNERKLNQAFWESSMVYLVFSVQGSGHFQGFSRMSSEIGREKSQDW
GSAGLGGVFKVEWVRKESLPFQFAHHLLNPWNDNKKVQISRDGQELEPQVGEQLLQLWER
LPLGDKTATD
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atggaccgtccgcccgcaggcctggcggctcgcccgcggggagaacttcccagggccatg
ttcaggccgagcagcgtctccccgcggccgcccgttgctggcggcggcggcggcggggga
ggcccagctcagttcggccctgggggcggaggccgggccaaggggctgaaggacattcgt
gtagacgaggaggtgaagatcgcggtcaatatcgctctggagcgcttcctatgcggggat
cagagagaaatggaatttccttcttctttcaccagcactgaaagagcctttgttcatcga
ttgagtcagtctcttggtttggtttctaaaagtaaaggaaagggagcaaatagataccta
actgtgaagaagaaagatggatcagaaacagctcatgcaatgatgacctgtaatttgact
cataattcaaaacatgctgttaggagcctaattcaaagatttcctgtcaccaataaagag
cgtactgaacttctgcctaaaacagaaagaggaaatgtgtttgcagttgaagctgaaaac
tgggaaatgagcaaaacaagctggggactcaacaatggcatacctcagattccagtgaaa
agaggagaatctgaatttgattctttcaggcagtctctgcccgtgtttgagaaacaagaa
gaaattgttaaaataattaaagaaaataaagtagttttgattgtaggagaaactggatct
ggaaagactacgcagattcctcagttccttttagatgattgctttaaaaatggtatcccc
tgccgtatattttgtacccagccaagacggttagcagcaattgctgtggccgaaagagtt
gctgcagagagaagggaaaggattggtcaaacaattggatatcagatccgattagaaagc
agggtttctccaaagacacttctgacattttgcactaatgggatattgcttcgtacattg
atggcaggagatagtacattgtcaactgtgacacatgttattgtggatgaagtacacgaa
agggatcgatttagtgattttttacttacgaagttaagagatcttttgcaaaagcaccca
actttgaaacttattctttctagtgccgccttggatgtaaatctttttataagatatttt
ggaagttgtccagtgatatatatacagggaagaccatttgaagtaaaagaaatgtttctg
gaagacatcttaagaactactggatacacaaacaaagaaatgctaaagtacaaaaaggaa
aaacaacgagaagagaaacagcaaaccacccttacagaatggtattcagctcaagagaat
actttcaagcctgagtctcagaggcagagaactgttcccaatgtgactgaagagtatgat
ttattggatgacggtggtgatgctgtcttcagccagttgacagaaaaagatgtgaattgc
cttgaaccatggttaataaaagaaatggatgcttgtctctctgacatatggctacataag
gatgttgatgcctttgctcaggtctttcaccttattttaactgaaaatgttagtgttgat
tacaggcatagtgaaaccagtgcaacagctctgatggttgctgcaggacgaggtttttca
agtcaagtagagcagttaattagtatgggagccaacgttcatagtaaagcatcaaacggc
tggatggctttagattgggctaaacactttggacagactgaaattgtggatcttctcgaa
tcttacagtgcttcactggaatttggaaatctagatgaaagttctctggttcacacaaac
ggaagtgacctcagtgcagaagacagagagctcctgaaagcttatcatcacagttttgat
gatgaaaaagtagacttggatttgatcatgcaccttctatacaatatctgccatggttgt
gatgctggtgcaatattaattttcctacctggatatgatgaaattgttggactgaaggat
cgcatcctgtttgatgacaagcggtttgctgacaacacacatagataccaagtctttatg
cttcattcaaatatgcaaacatctgatcaaaagaaagtattaaaaaacccacctgctggt
gttcgaaaaataatcctttccaccaatattgctgaaaccagcatcacagtgaacgatgtt
gtctttgttattgattctggtaaggtgaaagagaaatcctttgatgcactgaattttgtt
acaatgttaaaaatggtgtggatttccaaagctagtgccatacaacgaaaaggcagggca
gggagatgcagacctggaatttgtttccgactgttcagtagactccgattccagaatatg
ttggaatttcagactccagaacttttgagagtgccattacaggaactttgtttacatact
aagctgttagccccagtgaattgtcctattgctgatttcctaatgaaagctccagaacca
ccaccagctctaattgtaagaaatgctatacaaatgcttaagacaatagatgcaatggac
gcatgggaggatctcactgagctgggctatcatttggctgacctgcccatggagccacat
cttggtaaaatggtcctgtgtgctgtcgtcttaaagtgtctggatcccatcctcacaatt
gcctgcacactagcctctcgagacccctttgtcctgccggcccaggcctctcaaagacgg
gcggccatgctttgtaggaaacgcttcgctgcaggaacttgcagtgaccacatggccctt
ctcagagcattccaggcatggcagaaagcacgatgtgatggatgggaacgagccttctgt
gaaaagaattttctttcacaagctaccatggaaataatcattggcatgagaactcagttg
cttggtcaacttagagcatcaggttttattagagcacgaggtggtggtgacatccgagat
gttaacacaaattccgagaactgggctgtcgttaaagctgcattggtggcaggcatgtat
cctaatttagtccatgtggacagagagaatgtagtattgacagggccaaaggagaaaaaa
gttcggtttcatcccacttcagttctcagtcagcctcaatataaaaagattcctccagcc
aatggtcaggctgcagcgattcaggcactgcccacagattggcttatttatgatgagatg
accagagcccacagaatagctaatattagatgttgttcggcagtgacccccgtcaccgtg
ttggtgttctgtggaccagtgaggctggcaagaaacgctcttcagaaaccttcctcgttt
caagcggatggtattcctaatgacagtagtgacagtgaaatggaagatagaactactgct
aatttggcagctttgaagcttgatgagtggcttaatttcaaactagagcctgaggcagcc
agtttgctgttgcacctccggcagaagtggcacagcttgttcttacgccgaatgagagct
ccgtctaaaccctggtctcaagttgatgaagccaccacacgagccatcatagctgttctc
agcaccgaagaacagtctgcatgcctacagcagccatctgggataggccagaggccaagg
cctatgtcttcagaagaactccctctggcatcgtcttggaggtcaaataacagtaggaaa
acctcagcagatacggaattttcggatgagtctgcgactgcagaaagagtattgatgaag
tctccatctccagcgctgcacccacctcagaaatacaaagatagaggaattttacatcct
aaacgaagcaccgatgaccgatcggatcaatcttctgtgaaatctacagacagcagtagc
tacccaagtccttgtgctagtccttcccctccatccttgggaaagggctcaaaatctcct
tcaccaagaccaaacatgcctactcgatacttcataatgaagagtagcaatttgagaaac
cttgaaatttctcaacagaagggtatctggtctacaacccctagtaatgagcggaagtta
aatcaagccttttgggaaagcagcatggtttacttggtattttctgttcaaggatcggga
catttccagggattttctaggatgtcttctgagataggaagggagaagagccaggactgg
ggctcagctggactgggaggagtatttaaggtggagtgggtccggaaggaaagtcttccc
tttcagtttgctcaccacttactcaatccctggaatgacaacaagaaagtccagatcagc
agagatgggcaggaactagagcctcaggttggtgaacagttgctgcagttatgggaacgc
cttccactgggagacaaaactgcaactgactga
DBGET
integrated database retrieval system
