Eumetopias jubatus (Steller sea lion): 114200842
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Entry
114200842 CDS
T07240
Symbol
XAB2
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
eju
Eumetopias jubatus (Steller sea lion)
Pathway
eju03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eju00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114200842 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eju03019
]
114200842 (XAB2)
03041 Spliceosome [BR:
eju03041
]
114200842 (XAB2)
Messenger RNA biogenesis [BR:
eju03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
114200842 (XAB2)
Spliceosome [BR:
eju03041
]
Complex B
Other components
Prp19-related factors
114200842 (XAB2)
Complex C
114200842 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
TPR_12
TPR_2
TPR_8
Suf
TPR_19
TPR_15
ARM_TT21
ARM_TT21_C
TPR_NPHP3
TPR_1
Motif
Other DBs
NCBI-GeneID:
114200842
NCBI-ProteinID:
XP_027948979
LinkDB
All DBs
Position
Unknown
AA seq
855 aa
AA seq
DB search
MVVMARLSRPQRPDLVFEEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERA
LKLLPCSYKLWYRYLKARRAQVKRRCVTDPAYEDANNCHERAFVFMHKMPRLWLDYCQFL
MDQGRVTHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESA
EEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNV
DAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYA
QFEESMIAAKMETASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEW
HKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARIILEK
ATKVSFKQVDDLASVWCECGELELRHENYDQALRLLRKATALPARRAEYFDGSEPVQNRV
YKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKA
YERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYA
QLEEEWGLARHAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLS
DEHAREMCLRFADMECRLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTI
REMLRIRRSVQATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLA
AEAERDQPPRAQSKILFVRSDASREELAELAQQANPEEIELGEDDDEDDMDLEPNEVRLE
QQSVPAAVFGSLKED
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgatggcgcgtctttcccggccgcagcggccggacctcgttttcgaggaagag
gacctcccctatgaggaggagatcatgcggaaccagttctcggtcaagtgctggctccgc
tacattgagttcaaacaaggtgccccgaagcccaggctcaaccagctgtatgagcgggca
ctgaagctgctgccctgcagctacaaactctggtatcgatacctgaaggcacgccgggca
caggtgaagcgtcgctgcgtgactgaccctgcctatgaagatgccaacaactgccacgag
agggcctttgtgttcatgcacaagatgccccgtctgtggctggactactgccaattcctg
atggaccagggccgcgtcacgcacacccgccgcacatttgaccgtgccctccgggccctg
cccatcacgcagcactctcgtatctggcccctgtacctgcgcttcctccgctcccacccg
ctgcctgagacagctgtgcggggctaccggcgtttcctcaagcttagccccgagagcgca
gaggagtacatcgagtacctcaagtccagcgaccggctggatgaagccgcgcagcgcctg
gccaccgtggtcaatgatgagcgcttcgtgtccaaggctggcaagtccaactaccagctg
tggcacgagctctgtgacctcatctcccagaacccagacaaggtgcagtcgctcaatgtg
gatgccatcatccgcgggggcctcacccgcttcactgaccagctgggcaagctctggtgc
tcgctggctgactactatatccgcagcggccacttcgagaaggctcgagatgtgtatgag
gaggccatccggaccgtgatgaccgtgcgggacttcacccaggtgttcgacagctacgcc
cagtttgaggagagcatgattgcagccaagatggagacagcctcagaactggggcgggag
gaggaagatgatgtggacctggagctgcgcctggcccgcttcgagcagctcatcagccgg
cggcccctgctcctcaacagcgtcttgctgcgccagaacccgcaccacgtgcacgagtgg
cacaagcgcgtggccctgcaccagggccgtccccgggagatcatcaacacatacacggag
gctgtgcagacggtggaccctttcaaggcgacaggcaagccccacacgctgtgggtcgca
tttgccaagttttacgaggacaacgggcagctggatgatgcccgcatcatcctggagaag
gccaccaaggtgagcttcaagcaggtggacgacctggccagcgtgtggtgtgagtgcggc
gagctggagctccggcacgagaactatgaccaggccttgcggttgttgcggaaggccacc
gcgctgcccgcccgccgagccgagtactttgacggctcggagcctgtgcagaaccgtgtg
tacaagtcgctgaaggtgtggtcgatgctcgctgacctggaggagagcctaggcaccttc
cagtccaccaaggccgtgtatgaccgcatcctggacctgcgcatcgccacgccccagatc
gtcatcaactacgccatgttcctggaggagcacaagtactttgaggagagcttcaaggcg
tacgagcgcggcatctcgctgttcaagtggcccaacgtgtccgacatctggagcacctac
ctgaccaaattcatcgcccgctacgggggccgcaagctggagcgagcacgggacctcttt
gaacaggcgctggacggctgccctcccaaatacgcaaagacgctgtacctgctgtacgcg
cagctggaggaggagtggggcctggcccggcacgccatggccgtgtacgagcgcgccacc
agggccgtggagcccgcgcagcagtacgacatgttcaacatctacatcaagcgtgcggcc
gagatctacggcgtcacccacacccgtggcatctatcagaaggccattgaggtgctgtca
gatgagcacgcccgggagatgtgcctgcggttcgcagacatggagtgcaggcttggcgag
atcgaccgggcacgcgccatctacagcttctgctcccagatctgtgacccccggaccact
ggggctttctggcaaacgtggaaggacttcgaggtccggcatggcaatgaggacaccatc
cgggagatgctgcggatccgccgcagcgtgcaggccacatacaacactcaggtcaacttc
atggcctcgcagatgctcaaggtgtcaggcagcgccacaggcactgtgtctgacctggcc
cctgggcagagcggcatggatgacatgaagctgctggagcagcgagcagagcagctagcc
gccgaggccgagcgggaccagcccccgcgggcccagagcaagatcctgtttgtgaggagt
gacgcctcccgggaggagctggccgagctggcccagcaagccaacccggaggagatcgag
ctgggtgaggacgacgacgaggacgacatggacctggagcccaatgaggtgcggctggaa
cagcagagcgtgccggccgccgtgttcgggagcctgaaggaggactga
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