Eumetopias jubatus (Steller sea lion): 114202360
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Entry
114202360 CDS
T07240
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
eju
Eumetopias jubatus (Steller sea lion)
Pathway
eju03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eju00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114202360 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eju03019
]
114202360 (EDC4)
Messenger RNA biogenesis [BR:
eju03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114202360 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
114202360 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
Beta-prop_HPS5
WD40_CDC20-Fz
DUF445
Beta-prop_TEP1_2nd
WD40_Prp19
WDR55
Motif
Other DBs
NCBI-GeneID:
114202360
NCBI-ProteinID:
XP_027951328
LinkDB
All DBs
Position
Unknown
AA seq
1400 aa
AA seq
DB search
MASSCASIDIEDATQHLRDILKLDRPAGGPSAESQRPSNAYNGDLNGLLVPDPLCSGDGT
SANKPGLRAMPPINLQEKQVICLTGDDSSTCIGILAKEVEIVASSDSSISSKARGSNKVK
IQPVAKYDWEQKYYYGNLIAVSNSFLAYAIRAASNGSAMVRVISVSASERTLLKGFTGSV
ADLAFAHLNSSQLACLDEAGNLFVWRLALVNGKIQEEILVHIQQPEGTPLNHFRRIIWCP
FIPEESEDCCEEGSPTVALLHEDRAEVWDLDMLRANHSTWPVRVSQIKQGFIVVKGHSTC
LSEGALSPDGTVLATASHDGFVKFWQIYIEGQDEPRCLHEWKPHDGRSLSCLLFCDNHKK
QDPEVPFWRFLITGADQNRELKMWCTVSWTCLQTIRFSPDIFSSVSVPPSLKVCLDLSAE
YLILSDVQRKVLYVMELLQNQEEGRACFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLP
AEEENDSLGADGTHGAGAMESAAGVLIKLFCVHTKALQDVQIRFQPQLNPDVLAPLPTHT
AHEDFTFGESRPELGSDGLGSSTQGSQPDPRRIVELPAPADFLSLSSETKPKLMTPDAFM
TPSASLQQIAASPSSSSSSSSPSSSSLTAVSAMSSASAVDQSLPSRPPEELTLSPKLQLD
GSLALSSSSSSLQASPRSLLPSLLPGPADKLTPKAPGQVPTAASALSLELQEVEPLGLPQ
ASPSRTRSPDVISSASTALSQDIPEIASEALSRGFVSSAPEGLEPDSMASAASALHLLSP
RPRPGPELGSQLGLDGGPGDGDRHSTPSLLEAALTQEATAPDSQVWPTAPDITRETCSSL
AESPRNGLQEKHKSLAFHRPPYHLLQQHDSQDASAEQSDHDDEVASLASAAGGFGAKVPP
PRLPAKDWKTKGSPRASPKLKRKGKKDDGDSAVGSRLMEHQVAEAPEDWPALIWQQQREL
AELRHSQEELLQRLCSQLEGLQSTVTGHVERALESRHEQEQRRLERALAEGQQRGGQLQE
QLTQQLSQALSSAVAGRLERSLRDEIKKTVPPCVSRSLEPVTGQLSSSVATKLTAVEGSM
KESISKLLKSKNLTDAIARAAADTLQGPMQAAYREAFQSVVLPAFEKSCQAMFQQINDSF
RLGTQEYLQQLESHMKSRKAREQEAREPVLAQLRGLVSTLQGATEQMAATVSSSVRAEVQ
HQLHVAVGSLQESILAQVQRIVKGEVSVALKEQQAAVTSSIMQAMRSAAGTPVPAAHLDC
QAQQAHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDPGQVFGQPPCPLSQPVLLSL
IQQLASDLGTRTDLKLSYLEEAVMHLDHSDPITRDHMGSVMAQVRQKLFQFLQAEPHNSL
GKVARRLSLMLHGLVTPSLP
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctcctgcgcgagcatcgacatcgaggacgccacgcagcacctgcgggacatc
ctcaagctggaccggcccgcggggggtcccagtgcagagagccagcggccatctaatgcc
tacaatggggatctcaacgggcttcttgtcccagaccccctctgctcaggtgatggtact
tcagcaaacaagcctggtctccgggccatgccacctattaaccttcaggaaaagcaggtc
atctgcctcacaggagatgacagctctacatgcatcgggattttggccaaggaggtggag
attgtggctagcagtgactctagcatctcaagcaaagcacggggcagcaacaaggtgaaa
atccagcccgtggccaagtatgactgggaacagaaatactactacggcaacctgatagct
gtgtccaactcctttttggcttatgccattcgggctgccagcaatggctcagcgatggtg
cgggtgatcagtgtcagcgcttcagagcggaccctgctcaagggcttcacgggcagtgtg
gctgatctggcctttgcacacctcaattcctcacagctggcctgcctggatgaggcaggc
aacctgttcgtgtggcgcttggctctggtgaatggcaaaattcaagaagagatcttggtc
cacatccagcagccagagggcacaccactgaaccacttccgcaggatcatctggtgcccc
ttcatcccggaggagagtgaggactgctgtgaggagggcagccccacagtggccctgttg
cacgaggaccgggctgaggtgtgggatctggacatgctccgcgccaaccacagcacctgg
cctgtgcgtgtcagccaaatcaagcaaggcttcatcgtggtaaaaggccacagcacctgc
ctgagtgaaggggccctctcacctgatgggactgtcctggctactgcaagccatgatggc
tttgtcaagttctggcagatctacattgaggggcaggatgagccaaggtgtctgcatgaa
tggaagcctcatgatgggcggtccctttcctgcctcctattctgtgacaaccacaagaaa
caggaccctgaagtccctttctggaggttcctcatcactggtgctgaccagaatcgggag
ctcaagatgtggtgcacggtgtcctggacctgcctccagaccattcgcttctccccagat
atcttcagctcagtgagtgtgccccccagcctcaaggtttgtctggacctctcagcagaa
taccttattctcagcgatgtgcaacggaaggtcctctatgtgatggagctgctgcagaac
caggaggaaggccgtgcctgcttcagctccatctctgagttcctgctcacccatcctgtg
ctgagtttcggtatccaggtcgtgagtcgctgtcgactgcggcacactgaggtgctgcct
gccgaggaggagaatgacagcctaggggctgatgggacccacggagctggtgccatggag
tctgcagccggtgtgctcatcaaactcttttgtgtgcatactaaggccttgcaggatgtg
cagatccgtttccagccgcagttgaaccctgatgtgctggccccactccccacccacact
gcccatgaggacttcacatttggagagtctcggcctgaactgggctctgacggcctgggg
tcatctacccaaggctcccagcccgacccccgacgcatagtggagctgcctgcgcctgct
gacttcctcagtctgagcagtgagaccaagcccaagctgatgacacctgacgccttcatg
acacctagcgcctccctgcagcagatcgctgcatcccccagcagctccagctccagctcc
agccccagctcctcctctcttacagctgtgtctgccatgagcagcgcctcagctgtggac
cagtccttgcccagcaggccgcctgaggagctgaccttgagccccaagctgcagctggat
ggcagtctggcactgagcagcagcagcagcagcctgcaagcaagcccacgcagcctcttg
cccagcctgctcccagggccagctgacaaactgactcccaaagcacctgggcaggtgcct
actgctgcctctgcactgtccctggagctgcaggaagtggagcccctggggctaccccag
gcttctcccagccgcacccgctcccctgatgttatctcctcagcttccactgccctgtcc
caggacatccctgagatcgcctctgaggccctgtcccgtggttttgtctcctctgctcct
gagggtcttgagccagacagtatggcctcagctgcctcagcgctccacctgctgtcccca
cggccccggccagggcccgagcttggctcccagcttggcctggatggaggccctggggat
ggggatcggcatagtaccccttcccttttggaggcagcattgacccaggaggccacagcc
cctgacagtcaggtctggcctacggcaccagacattactcgtgagacctgtagcagccta
gcagagagtcccaggaatggcctccaggagaagcacaagagcctggccttccaccgacca
ccttaccacctgctgcagcaacatgacagccaggatgccagtgctgagcaaagtgatcat
gatgatgaggtggctagccttgcctctgctgcagggggctttggtgccaaagttccccct
ccacggctaccggccaaggactggaagaccaagggttctcctcgagcctcacccaagctt
aagagaaagggcaagaaagatgacggggattcagctgtgggatcccggctcatggaacac
caggtggcagaagctcctgaggactggccagcactaatttggcaacagcagagggagctg
gcagagctgcggcacagccaggaagaattgctgcagcgtctttgcagccagcttgaaggt
ctgcagagcaccgtcacgggccacgtagaacgcgccctggagtcacggcatgagcaggag
cagcggcggctggagcgggcactggctgaggggcagcagcggggtgggcagctgcaggag
cagctgacccaacaactgtcccaggcactgtcttcggctgtagctgggcggctggagcgt
agcctacgggatgagatcaagaagacggtacctccgtgtgtctccaggagcctggagcca
gtgacaggccagctgagtagctcagtggccaccaagctcacagccgtggagggtagcatg
aaagagagtatctccaagctgctaaagtccaagaacctgacagatgccattgcccgagca
gctgcagacacattacaggggccaatgcaggccgcctaccgtgaagccttccagagtgtg
gtgctgccggcctttgagaagagctgccaggccatgttccaacagatcaatgatagcttc
cgactgggcacgcaagagtacttgcagcagctggagagccacatgaagagccggaaggca
cgagaacaggaggcacgggagcctgtgttagcccagctgcggggcctggtcagcacactg
cagggcgccactgagcagatggcggccaccgtgtccagcagcgtccgggctgaggtgcag
caccagctgcacgtggctgtgggcagtctgcaggaatccattttagcacaggtacagcgc
atcgttaagggcgaggtgagtgtagccctcaaggagcaacaggccgccgtgacgtctagc
atcatgcaggccatgcgttcagctgctggcacgcctgtccccgctgcccaccttgactgc
caggcccagcaagcccatatcctgcagctgctgcagcagggccacctcaatcaggccttc
cagcaggccctgacagctgctgacctgaacctggtgctgtatgtgtgtgaaactgtggac
ccagggcaggtttttgggcagccaccctgcccactctcccagcctgtgctcctttccctc
atccagcagctggcctctgaccttggtactcgaactgacctcaagctcagctacctggaa
gaggctgtgatgcacctggaccacagtgaccccatcactcgggaccacatgggctccgtc
atggcccaggtgcgccagaagctcttccagttcctgcaggctgaaccacacaactcactt
ggcaaagtggcccggcgtctcagcctcatgctgcacggtcttgtaacccctagcctccct
tag
DBGET
integrated database retrieval system
