Eumetopias jubatus (Steller sea lion): 114202608
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Entry
114202608 CDS
T07240
Symbol
SMARCC1
Name
(RefSeq) SWI/SNF complex subunit SMARCC1 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
eju
Eumetopias jubatus (Steller sea lion)
Pathway
eju03082
ATP-dependent chromatin remodeling
eju04714
Thermogenesis
eju05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
eju00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114202608 (SMARCC1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
114202608 (SMARCC1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
114202608 (SMARCC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eju03021
]
114202608 (SMARCC1)
03036 Chromosome and associated proteins [BR:
eju03036
]
114202608 (SMARCC1)
Transcription machinery [BR:
eju03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
114202608 (SMARCC1)
Chromosome and associated proteins [BR:
eju03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
114202608 (SMARCC1)
PBAF complex
114202608 (SMARCC1)
GBAF(ncBAF) complex
114202608 (SMARCC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
HEAT_GCN1
Chromo
BRCT_2
DUF919
SpeFL
Motif
Other DBs
NCBI-GeneID:
114202608
NCBI-ProteinID:
XP_027951699
LinkDB
All DBs
Position
Unknown
AA seq
1104 aa
AA seq
DB search
MAAAAGGGGLGAAAGAAGAGGAATAAGLAVYRRKDGGPASKFWESPETVSQLDSVRVWLG
KHYKKYVHADAPTNKTLAGLVVQLLQFQEDAFGKHVTNPAFTKLPAKCFMDFKAGGTLCH
ILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQSNCLTRPNIYLIPDIDLKL
ANKLKDIIKRHQGTFTDEKSKASHHIYPYPSSQEDEEWLRPVMRKDKQVLVHWGFYPDSY
DTWVHSNDVDAEIEDPPIPEKPWKVHAKWILDTDVFNEWMNEEDYEVDENRKPVSFRQRI
STKNEEPVRSPERRDRKASANARKRKHSPSPPPPTPTESRKKSGKKGQASLYGKRRSQKE
EDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDEQDEETVTTGG
KEDEDPSKGDQSRSLDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNK
SKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVD
PESRPMAMGPPPTPHFNVLADTPSGLVPLHLRSPQVPAAQQMLNFPEKNKEKPIDLQNFG
LRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILH
FLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALE
EFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLEGAEEEK
METDTDGQQPEKAENKGENETDEGDKAQDGENEKNSEKEQDSEVSEDTKSEEKETEENKE
LTDTCKERESDLGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEERKIKSLVALLV
ETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELRARQQMEQ
QQHGQNPQQAHQHSGGPGLAPLGAAGHPAMMPHQQPPPYPLMHHQMPPPHPPQPGQIPGP
GSMIPGQPMPGRMIPTVAANIHPPGSGPAPPGMPPMPGNILGPRVPLTAPNGMYAPPPPP
PPPPPPADGVPPPPAPGPPASAAP
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggcggcgggcggcggcgggctaggggcggcggcgggcgccgcaggcgcggga
ggtgcggcgacggccgcgggcctggccgtttatcggcggaaggacggtggcccggccagc
aagttttgggagagcccggagacggtgtcccagctggattcggtgcgggtctggctgggc
aagcactacaagaagtatgttcatgcggatgctcctaccaacaaaacactggctgggctg
gtggtacagcttcttcagttccaggaagatgcctttgggaagcatgtcaccaacccggcc
ttcaccaaactcccggcaaaatgtttcatggatttcaaagctggaggcaccttgtgtcac
attcttggggctgcttacaagtataaaaatgaacagggatggcgtagatttgatctacag
aatccatcccgaatggatcggaatgttgaaatgtttatgaacattgaaaaaacattggtg
cagagcaactgtctgaccagacccaacatctacctcattccagacattgatctgaagttg
gctaacaaattaaaagatattatcaaacgacatcaggggactttcactgatgagaagtca
aaagcttcccaccacatttatccatatccttcctcacaagaggatgaagagtggttgaga
ccggtgatgagaaaagataagcaggtgttagtgcattgggggttttacccagacagctat
gatacttgggtccatagtaatgatgttgatgcggaaattgaagatccaccaattccagaa
aagccatggaaggttcatgcgaaatggattttagacactgatgttttcaatgaatggatg
aatgaggaggattatgaggtggacgagaacaggaagcccgtgagctttcgtcagcgaatt
tcaacaaagaatgaagagccagtcagaagtccagagagaagagataggaaagcatcagct
aatgctcgaaagaggaaacattcgccttcccctccacctcctacacccacagaatcccgg
aagaagagtggaaagaaaggccaagctagtctttatgggaagcgcagaagtcagaaagag
gaagatgagcaagaagatcttaccaaggacatggaagacccaacaccggtacccaacata
gaggaagtggtgcttccaaaaaatgtgaacccaaagaaagacagtgaaaacacacctgtt
aaaggaggaactgtcgcagatctagatgagcaggatgaagaaacagtcacaacaggagga
aaggaagatgaagatcctagcaaaggtgatcagagtcgctcacttgaccctggagaagat
aatgtgacagagcagaccaatcacattattattcctagttatgcgtcgtggtttgattat
aactgtattcacgtgattgaacggcgtgctcttcctgagtttttcaatggaaagaacaaa
tccaagactccagaaatatacttggcatatcgaaattttatgattgacacatatcgccta
aacccccaagaatatttaaccagcactgcttgtcggaggaacttgactggagacgtgtgt
gctgtgatgagggttcatgcctttttagagcagtgggggcttgttaattaccaagtggat
ccagaaagtcggcccatggcaatgggacctcctcctactcctcattttaatgtattagct
gataccccctctgggcttgtgcctctacatcttcgatcacctcaggtccctgctgctcag
cagatgttgaattttcctgagaagaacaaggaaaaaccaattgatttgcagaactttggt
cttcgtactgacatttactccaagaaaaccttagcaaagagtaaaggtgctagtgctgga
agagaatggactgaacaggagacccttttgctcctggaggccctggagatgtataaggat
gattggaacaaagtgtcagagcatgttggaagtcgtactcaggatgaatgcatcctccac
tttctgaggcttcctattgaggacccataccttgagaattcggatgcttccttggggccc
ctggcctaccagcctgtccctttcagtcagtcaggaaacccagtcatgagcactgttgct
tttttggcatctgtggtggaccctcgcgtggcatctgctgcagcaaaagcagctttggag
gagttttctcgggtccgagaggaagtgccactggaattggtcgaagctcatgtcaagaaa
gtgcaagaagcagcacgggcttctgggaaagtggatcccacctatggcctggagagcagc
tgcattgcaggcacaggacctgatgagccagagaaacttgaaggggctgaagaggaaaaa
atggaaacagatactgatggtcaacagcctgaaaaggcagaaaacaaaggggaaaatgaa
acagacgaaggggataaagcacaagacggagaaaatgaaaaaaatagtgagaaggagcag
gacagtgaagttagtgaggataccaaatcagaagaaaaggaaactgaagagaacaaggaa
ctcactgatacttgtaaagaaagagaaagcgatcttgggaagaagaaagtagaacacgaa
atttccgaaggaaatgtggccacggctgccgcagctgctctcgcctcagctgcaaccaaa
gccaagcatctggctgctgtggaggagagaaagatcaagtctctggtggccctcttggtt
gagacacaaatgaagaaattggagatcaaacttcgacattttgaggaactggaaactatc
atggacagagagaaggaggctttagaacaacagaggcagcagttgctcactgaacgtcag
aacttccacatggaacagctgaaatatgccgaattacgagcccggcagcagatggaacag
cagcagcacgggcagaaccctcagcaggcacaccagcactcaggaggacctggcctggcg
ccgcttggagcagcagggcaccccgccatgatgccccatcagcagccccctccctaccct
ctgatgcaccaccagatgccaccacctcatccaccgcagccaggtcagataccaggtcca
ggttccatgatccctgggcagcccatgccaggccgcatgattcccaccgttgcagccaac
atccacccccccggaagtggcccagcccctcctggtatgcctccaatgccaggaaacatc
ttaggaccccgggtacccctcacggcacctaatggcatgtatgcccctccgccgccgccg
ccgccgccgccgccgcccgctgatggagtccctccgcctcccgctccaggcccaccagcc
tcagccgccccctag
DBGET
integrated database retrieval system
