Eumetopias jubatus (Steller sea lion): 114205150
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Entry
114205150 CDS
T07240
Symbol
CPSF2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
eju
Eumetopias jubatus (Steller sea lion)
Pathway
eju03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
eju00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114205150 (CPSF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eju03019
]
114205150 (CPSF2)
Messenger RNA biogenesis [BR:
eju03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
114205150 (CPSF2)
U7-dependent histone pre-mRNA processing factors
114205150 (CPSF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
114205150
NCBI-ProteinID:
XP_027954240
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDEHFSMDIIDSLRKHVHQIDAVLL
SHPDPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD
AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLSLCHGLSDLARVPSPKVVLASQPDLECGFSRDLFIQWCQDPKNSIILTYRTT
PGTLARFLIDNPSEKITEIELRKRVKLEGKELEEYLEKEKLKKEAAKKLEQSKEADIDSS
DESDVEEDIDQPSAHKTKHDLMMKGEGSRKGSFFKQAKKSYPMFPAPEERIKWDEYGEII
KPEDFLVPELQATEEEKSKLESGLTNGDEPMDQDLSDVPTKCISTTESIEIKARVTYIDY
EGRSDGDSIKKIINQMKPRQLIIVHGPPEASQDLAECCRAFGGKDIKVYMPKLHETVDAT
SETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELKDDGEDS
EMQVDAPSDSSVIAQQKAMKSLFGDDEKETGEESEIIPTLEPLPPHEVPGHQSVFMNEPR
LSDFKQVLLREGIQAEFVGGVLVCNNQVAVRRTETGRIGLEGCLCQDFYRIRDLLYEQYA
IV
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgacatctattatcaaattaactaccctctctggggttcaagaagagtctgctctttgc
tatcttttgcaagttgatgagtttagatttctgttggactgtggctgggacgagcacttt
tctatggatattatagattccctgaggaagcatgttcaccaaattgatgcagtactgttg
tcccaccctgatccccttcatctcggtgctctcccgtacgccgtcgggaagctgggtctg
aactgtgctatctacgcgaccattcctgtttataaaatgggacagatgttcatgtatgat
ctttaccagtctcgacacaatacagaagactttacgctcttcacgttagatgatgtggat
gcagcctttgataaaatacagcagttaaaattctctcagattgtgaatttgaaaggtaaa
ggacatggcttgtctatcacgcctctgccagctggtcatatgataggtggaacaatatgg
aaaatagtcaaagatggagaagaagaaattgtgtacgcagttgattttaaccacaagagg
gagatccatttaaatggatgttccctggaaatgctaagcagaccctccctgcttatcaca
gattcctttaatgctacgtatgtgcaacctaggagaaaacagagagatgagcaacttctg
acaaatgtcctggaaacacttcgaggtgatggaaatgtattaatagcagtggacactgca
ggcagagttttggaacttgctcaactccttgatcaaatctggagaactaaagatgcagga
ctgggtgtctactcgctggcactcctgaataatgtcagctataatgtggtggagttttcc
aagtcccaggtagaatggatgagtgacaaattgatgagatgttttgaagacaaaagaaat
aatccatttcagtttcgccatctctctttatgtcacggtctttccgacttggctcgggta
cctagccccaaagtggtactcgccagccagcctgacctggaatgtggattttcaagggat
ctcttcattcagtggtgtcaggaccctaaaaactcaatcattctaacttacagaactact
cctgggactttagcacgtttcctaattgataatccgtctgaaaaaattacggaaatagag
ttgaggaaacgtgtgaagcttgaagggaaagaactagaagaatacttggaaaaagagaaa
ctaaagaaagaagcggcaaaaaaacttgagcagtcaaaagaggcagacatagattccagt
gatgagagtgatgttgaggaagacattgaccagccgtcagctcataagactaagcatgac
ctgatgatgaaaggtgaaggtagtcgtaaaggaagtttcttcaaacaggctaaaaagtct
taccctatgtttcctgccccagaagaaagaattaaatgggatgaatatggagaaattatc
aaaccagaggatttcttagtgccagaacttcaagcaactgaagaagagaaaagcaaatta
gaatctggcttgacaaatggagatgaacccatggatcaggatttatctgatgttcctacc
aagtgtatttctacgacagagtctattgaaataaaagccagggttacttacatagactat
gaaggacgctctgatggagattccattaaaaagatcattaatcagatgaaaccacgacag
ctgatcattgtccatggaccaccagaggccagtcaggatcttgcagagtgctgccgtgcg
tttggtgggaaagatattaaagtgtacatgccaaagctacacgaaacagtcgatgccact
agtgaaactcacatctaccaggtgagattgaaagattcacttgtcagctcccttcagttt
tgtaaggcaaaagatgccgaattagcttggatagatggtgtcttggacatgagagtttcc
aaagtggacacaggagttattttagaagaaggagaactgaaggatgatggagaagactca
gaaatgcaagtggacgctccttcggattccagtgttatagcacaacagaaggccatgaag
agtctgttcggggacgatgagaaagagacaggtgaagaaagtgagatcattccgaccttg
gaacccttacccccccacgaggttcctggacatcagtcagtttttatgaatgaaccaaga
ctgtcagacttcaaacaagttctcttacgggaggggattcaagctgaatttgtaggaggt
gtacttgtttgcaacaaccaagtagcagtccgtagaacggaaactggacgcattggatta
gaaggctgcctttgtcaagatttttataggataagagaccttttatatgaacagtatgcc
attgtgtaa
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