Eumetopias jubatus (Steller sea lion): 114205584
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Entry
114205584 CDS
T07240
Symbol
COL6A6
Name
(RefSeq) collagen alpha-6(VI) chain
KO
K06238
collagen type VI alpha
Organism
eju
Eumetopias jubatus (Steller sea lion)
Pathway
eju04151
PI3K-Akt signaling pathway
eju04510
Focal adhesion
eju04512
ECM-receptor interaction
eju04518
Integrin signaling
eju04820
Cytoskeleton in muscle cells
eju04974
Protein digestion and absorption
eju05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
eju00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
114205584 (COL6A6)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114205584 (COL6A6)
04518 Integrin signaling
114205584 (COL6A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
114205584 (COL6A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
114205584 (COL6A6)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
114205584 (COL6A6)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
114205584 (COL6A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
eju04147
]
114205584 (COL6A6)
00536 Glycosaminoglycan binding proteins [BR:
eju00536
]
114205584 (COL6A6)
Exosome [BR:
eju04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
114205584 (COL6A6)
Glycosaminoglycan binding proteins [BR:
eju00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
114205584 (COL6A6)
Hyaluronan
Extracellular matrix or blood plasma proteins
114205584 (COL6A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_3
vWA_SIBA-E
Integrin_beta
Motif
Other DBs
NCBI-GeneID:
114205584
NCBI-ProteinID:
XP_027954882
LinkDB
All DBs
Position
Unknown
AA seq
2392 aa
AA seq
DB search
MGSKNPFKDVSWARGRLGGEGSGRGGEKRLYSGKEGRGSYRPPAGHRQARGCPWRLQFLS
RFPRSPPEVPTVSRRSAALGAALPAVRSGRAGRKLTQGLASAGLGAVWKFPRDFKLENIL
GHNMKMLLILFLIIICSHVSMNKDPGPEYADVVFLVDSSDHLGTNSFPFVKAFINKMISS
LPIEAHKYRVALGQYSNQLHSVFQLSTFKSRNPMLNHLRKNFGFIGGSLRMGNALREAHR
TYFSAPASRRDRKQFPPILVVLASAESEDDVEEASKALQRDGVRIVSVGLQDASEEELKA
MATAQFHFKLRSVRDLGTFSQNMTQIIKEATQYRDGAADDILVEVCQGPSVADVVFLLDV
SVNDSQENFEYLKEFLEESVSALDIKENCMRVGLVTYSNETKVINSLSRGVNKSEVLQNI
QNLSPQAGKAYTGAAIRKIRKEVFSARNGSRKNQGVPQIAVLVTHRPSEDNVTKAAVNLR
REGVTIFTMGIEGASDSQLEKIASHPAEQHVSKLKTFSDLAAHNQTFLKKLRNQITHTVS
VFSERTETLKSGCVDTEEADIYLLIDGSGSTQATDFHEMKTFLSEVVGMFNIAPQKVRVG
AVQYADSWDLEFEINKYTNKHDLGKAIENIRQMGGNTNMGAALNFTLGLLQKAKKQRGNR
VPCHLVVLTNGMSKDSILEPANRLREELIRVYAIGVKEANQTQLREIAGEEKRVYYVHDF
DALKDIRNQVVQEICAEEACKEMKADIMFLVDSSGSIGLENFIKMKTFMKNLVSKSQIGP
DRVQIGVVQFSDINKEEFQLNRYMSQNEISDAIDRMTHIGETTLTGSALTFVSQYFSPAK
GARPNVRRFLILITDGEAQDIVKDPAVALRQEGIIIYSVGVFGSNVTQLEEISGRPEMVF
YVENFDILQHIEDDLVFGICSPREECKRIEVLDVVFVIDSSGSIDHDEYNIMKDFMVDLV
KKADVGKNQVRFGALKYADDPEVLFYLGDLGTKWEVISVLQKDQPMGGNTYTAEALGFSD
HMFSEARGSRLQKGVPQVLIVITDGESHDADKLNATAKALRDKGILVLAVGIAGANPVEL
LAMAGSSDKYFFVETFGGLKGIFSDVSASVCNSSKVDCEIEKVDLVFLMDGSNSIHPDDF
KKMKEFLASVVQDFDVSVNRVRIGAAQFSHTYRPEFPLGTFIGKKEISFQIENIQQIFGY
THIGAALRHVRHYFQPDMGSRINAGTPQVLLVLTDGQSQDEVAQAAEDLRHKGIDIYSVG
IGDVDDQQLIQITGTADKKLTVHNFDELTKVKKRIVRNICTSGGESNCFVDVVVGFDIST
HENGQTLLEGQSWIETYLQDILRTISSLNGVSCEVGTETQVSVAFQVTNAMKKYSPKFEI
YSENILNSLKDVTVKGPSLLNANLLSSLWDAFQNKSATRGKVVLLFSDGLDDDIEKLEQK
SDELRNEGLNALITVALDGATDSSDLADLLYIEFGKGFEYRTQLTIGMRDLGSRLSKQLV
NVAERTCCCLFCKCIGGDGIMGDPGPPGKKGSPGFKGSEGYLGEEGITGDRGTSGPVGEQ
GTKGCYGAKGPKGNRGLNGQEGEVGESGIGGLNGEQGESGLPGEKGEKGDEGSQGSPGKR
GVSGDRGAKGQRGDPGVPGFDNTIEGPKGLKGERGRQGRRGWPGPPGTPGSRRKTAAHGR
RGHTGPQGKTGIPGPDGLEGSWGLKGPQGPRGETGMKGEKGGLGSKGPQGPPGPGGEAGS
PGHLGSQGNKGEPGDLGEKGAIGLPGPRGLPGGDGNPGYGSIGSKGAKGQEGFPGESGPK
GETGDPGGPGETGPKGARGKMISTGPPGEMGSPGEPGPPGRKGVKGARGLASFSMCELIQ
YVRDHSPGRHGKPECPVHPTELVFALDQSRDVTKQEFERMKELLSSLVRGVRVRENSCPV
GARIAILTYTSHVRHLIRFSDAYKKNQLLREIEAIPYERSSDIREIGKVMRFISRNVFKR
TLPGAHTRRIATFFSSGQSADAHTIATATMEFSALDIIPVVIAFSNVPSIKRAFAIDDTG
TFQLIMVPSGTDYAPALERLQRCTFCYDVCKPDALCDQAKPPPAQSYVDAAFLLDSSRHM
GSAEFEDIRQFLGALLDHFEITPEPETSVTGDRVALLSHAPPNFLPNTQKSPVRTEFNLT
TYNSKRLMKRHLEESVQQLNGDAFIGHALQWTLDNIFLNTPNMRRNKVIFVISAGETSHL
DRETLKKESLRAKCQGYTLFVFSLGPAWNDKELEDLASYPLDHHLVQLGRIHKPDHRYSV
KFVKSFVNSIRRAINKYPPINFKMKCNRLSSTDLKLPPRQWRSFVPGPYKTTFKEDALQK
AKFFQDKKYLSRVARGSRDDTIRNLTRNTFHTFKNGKKVIKAASKQHDKGRA
NT seq
7179 nt
NT seq
+upstream
nt +downstream
nt
atgggctccaaaaacccattcaaagacgtgagctgggcccggggccgcctgggcggggaa
gggtcgggccggggcggggagaagcgtttatatagcggcaaggaggggcgtgggagctac
cgcccgcctgcgggacaccggcaggcgagaggctgcccgtggcgcctccagttcctttcc
cggttcccgaggtctccacccgaggtccccaccgtctcccggcggtcggctgcactcggc
gctgcgctcccggcggtgcgctcagggcgcgccgggaggaaactcacgcagggcttggca
agcgcagggctgggggccgtgtggaagtttccccgagatttcaagttggaaaatatttta
ggtcataatatgaaaatgctgctgattttgttcctcataataatttgttcccatgtctct
atgaacaaagatcctggccctgagtatgcagatgtcgtgtttctggtggacagctctgat
cacctgggaactaactccttcccctttgtgaaagcgttcatcaacaaaatgatcagcagt
ctgcccatagaggcccacaagtaccgtgtggccctgggccagtacagcaaccagctccac
agtgtgttccagctgagcaccttcaagagcaggaaccccatgctgaaccacctcaggaag
aacttcggcttcattggcggctccctgaggatgggcaacgctctccgggaggctcacagg
acctacttctctgcaccggccagcaggagggacaggaagcagtttcccccaattctggtg
gtcctggcttccgcggagtctgaggatgacgtggaagaggcctccaaggccctgcagaga
gatggggtgaggatcgtctctgtggggctgcaggatgcttctgaggaggagctgaaggcc
atggccactgctcagttccatttcaagctccggtcggtcagggaccttggcacattttcc
caaaacatgacacagatcatcaaggaagccacccagtacagggatggagcagctgatgat
attcttgtagaagtttgccaaggcccgtctgtggcagatgtggtgttcctgctggatgtg
tctgtcaatgacagccaggagaactttgaatatcttaaggaattcctggaagagagtgta
tctgctcttgacataaaggaaaactgcatgagggttggcctcgtgacctacagcaatgag
acgaaagtgataaattcactcagcaggggcgtaaataagtcagaggttctccagaatatt
cagaacctctctccccaggctgggaaggcttacacaggagctgccatcagaaagatcagg
aaggaagtgttcagtgcacgcaatggcagtcggaagaatcagggggtgccccagattgcc
gtgctggtgacccacagaccctcagaggataacgtgaccaaggcagccgtgaacctccgg
cgcgagggcgtgaccattttcaccatgggcatcgagggggccagcgacagccagctagaa
aagatcgcctctcaccctgccgagcagcacgtgtccaaactgaaaaccttctctgacctg
gccgctcacaaccagacgtttctgaagaagctgcggaaccagataacacacacagtctct
gttttttcagagcgcactgaaactctcaaatccggttgtgtggatactgaagaagcagac
atttatctgctcattgatggctctggaagcacccaggccacagacttccacgaaatgaag
accttcctgtcagaggtggtagggatgttcaacattgctccccaaaaggtgcgggttggg
gctgtccagtacgctgacagctgggacttggaatttgagatcaataaatacactaacaag
cacgacttgggaaaggccatcgagaacatccggcagatgggtgggaacacaaacatgggg
gcagccctgaatttcacactagggcttttgcaaaaagcaaagaagcagcgaggaaaccga
gtgccttgtcatcttgttgtcctgacgaatggcatgtccaaggatagcatcttggagcct
gctaacagactgagagaagaactcattcgtgtctatgccattggggtcaaggaggccaac
caaacacaactgcgagaaattgcaggcgaggagaagagggtatactacgtgcatgacttc
gatgctttgaaagacataagaaaccaagttgttcaagaaatctgtgctgaagaagcctgc
aaagagatgaaagcggacatcatgtttctggtggacagttctggcagtataggacttgaa
aatttcatcaaaatgaaaacatttatgaaaaacctggtgagcaaatctcagattgggcca
gatcgggtacaaatcggtgtagtccagttcagcgacatcaataaggaggaatttcagctc
aacagatatatgtcccaaaatgagatttcagatgcaatagaccggatgactcatattgga
gaaaccaccttgactggtagtgccctgacctttgtgtctcagtacttcagccctgccaag
ggggcccggcccaatgttagaaggtttctcatcctcatcactgacggtgaagctcaggac
atagtcaaggacccagcagtagcacttcgacaagaaggcataattatctactctgtcggg
gtgtttggttccaatgtcacccagctcgaggaaatcagcgggaggccagagatggttttt
tatgttgagaattttgatattctgcagcacattgaagatgatcttgtttttggaatatgc
agcccccgtgaagaatgcaagaggattgaagttttggatgttgtgtttgtaattgacagc
tctggaagcattgaccatgatgaatataatatcatgaaagactttatggttgacttggtg
aaaaaagctgatgttggcaagaatcaggtccggtttggggctctgaagtatgctgatgac
ccagaggtgctgttttatctgggtgaccttggcacaaaatgggaggtgatttcggtgctc
cagaaggaccagcccatggggggcaatacttacactgccgaggccttaggtttctcagac
cacatgttcagtgaagcccgaggtagccgtctgcaaaaaggggtcccccaagtcctcatt
gtgatcaccgatggggaatcccatgatgctgataagctcaatgccacagccaaggccttg
agggacaaaggcattcttgtcctggctgtggggattgctggtgctaatcccgtggagctg
ctagccatggcaggatcaagtgacaagtacttctttgtggagacgtttggaggcctgaag
gggatattttcagatgtgtcagccagtgtatgtaactcttcaaaagtagattgtgaaatt
gaaaaagtagatcttgttttcctcatggatggttcaaatagcattcatccagatgacttc
aagaagatgaaggaattccttgcatctgttgttcaagactttgatgtcagtgtcaacaga
gtacgtataggtgctgcccagtttagccatacctatcggccagaatttccactgggtact
ttcataggcaaaaaggagatatcatttcagattgaaaacatccagcagatctttggatac
acacacattggcgctgcactccggcatgtgaggcattacttccagccagacatgggcagc
cggataaatgcaggtaccccgcaggtgttgctggtcctcacagatggccagtcccaagat
gaggtggcccaagctgctgaagacttgagacacaaaggtattgacatttactctgtgggc
attggggacgtggatgatcagcagctcattcagatcaccgggactgccgataaaaaacta
acggttcataactttgatgaactgacaaaggtcaaaaaaaggatagttcgcaacatctgt
acctcggggggtgagagcaattgttttgtggacgttgtggtgggatttgacatctcaact
catgaaaatgggcagactttgcttgaaggtcagtcttggatagaaacctaccttcaagac
atcttacgtaccatcagctccctcaatggggtaagctgtgaggtgggcacagagactcaa
gttagtgtggcttttcaagtgaccaatgccatgaaaaaatattcacccaagtttgagatc
tatagcgaaaatatactgaacagcttgaaggatgtaacagttaaaggaccatctcttctc
aacgcaaacctcttgagttctctatgggatgcatttcagaataaatcagctactcgagga
aaggtggttctcttattttcagatggattggatgatgacattgaaaagcttgaacaaaaa
tctgatgaacttagaaatgaaggcctgaatgccctcataactgttgctctggatggagcc
acagattcaagtgacctggctgatctcctctacattgaattcgggaaagggtttgagtac
aggacccagctcactattggaatgagggaccttgggagccgactgtcaaagcaactggtt
aatgttgctgaaaggacgtgctgctgtttattctgcaagtgcattggaggggatggcata
atgggggatcctggaccaccagggaaaaagggatccccaggttttaaaggcagtgagggc
tatctgggagaggaaggcattactggagacagaggaaccagtggaccagtgggagagcaa
ggtactaagggatgctatggcgccaaaggtcctaagggaaacaggggactaaatggacag
gagggagaagttggagaaagtggaattggcgggttaaatggagaacagggtgagagtggt
cttcctggagaaaaaggagaaaagggtgatgaaggatcccagggaagcccaggaaagcga
ggggtttctggtgaccgaggtgcaaagggccagcgaggagaccctggagttcctggattt
gacaataccatagaaggacctaagggcttgaaaggagaacgtggaagacaaggtagaaga
ggctggccaggaccccctggaacaccaggctccagaagaaagacagcagctcatggccga
agaggacatacaggcccacaggggaaaacaggcatcccaggcccagatggacttgaaggc
tcatggggacttaagggccctcagggtcccagaggagagaccggtatgaaaggcgaaaaa
ggaggtctgggaagtaaaggtcctcaggggcctccaggaccaggaggagaagcagggagt
ccaggccatttgggaagccaaggaaataaaggagaacctggagatttgggagaaaaagga
gctattggcctcccgggtcctcgaggcttgccgggtggtgatggcaatccaggttatggt
agcattggaagtaaaggagcaaaggggcaagaaggatttcctggagaaagtggacctaag
ggtgagactggggaccctgggggtccaggagaaactgggcccaagggagctagaggcaag
atgatatccactgggcctccaggagagatgggatccccgggggagccaggacctcctgga
cgcaagggtgtgaaaggggccagaggattggcttcattttctatgtgtgagctcattcag
tatgtacgggaccacagccctggcagacatggaaaaccagaatgccccgtgcatcccacc
gaattggtgtttgccttggaccagtctcgagatgtcaccaaacaggaatttgagcgcatg
aaggagctgctatcttccctggtgaggggcgtcagggtccgggagaacagctgcccggtg
ggcgctcgcatagctatcctcacctatacctctcacgtccggcacctcatccgcttctca
gacgcctacaagaagaaccagctcctcagggagattgaagctattccttacgagaggtcc
tcagacatcagggagatcggcaaagtgatgaggtttatctccagaaatgtcttcaagaga
acgcttccaggggctcacacaagaagaatcgccaccttcttcagcagcggtcagtcggca
gatgcccataccattgccactgcaactatggaattcagtgcccttgacatcattccggtc
gtgatcgcattcagcaacgtgccctccatcaagcgtgcatttgcgattgatgacactggc
acattccaactcataatggttccatccgggaccgactacgcgccagcattagagagactc
cagcggtgtactttctgctatgatgtatgcaaaccagacgctctttgcgatcaagccaaa
ccaccccctgcacagtcttacgtggatgctgctttccttctggacagctcccggcatatg
ggaagtgctgaatttgaagacataagacaatttttgggagcactgttagatcactttgag
atcaccccagagcctgagacctctgtcactggagaccgagtggccctattaagccatgct
ccccccaacttcctacccaacactcagaagagtcctgttagaactgagttcaaccttacc
acctacaacagtaaacgcctcatgaagaggcacctggaagaatcagttcaacaactaaat
ggagatgctttcattggtcatgcgttacagtggaccctggacaatatctttttaaataca
cccaatatgagaagaaacaaagtcatatttgtgatatccgctggggaaaccagtcacttg
gacagggaaaccttaaagaaagaatccttgagagccaaatgtcaaggttataccctattt
gtgttttcccttggccctgcttggaatgacaaggaactagaagatctagccagctaccct
ttggatcaccacttggtccagcttggccgaattcataaacctgaccacagatacagtgtg
aagtttgtgaaatcctttgtaaactcaatcaggcgtgcaatcaacaaatatccacccata
aacttcaaaatgaagtgcaatagactgagctctacagatctgaagctgcccccacggcag
tggcgaagctttgttcctggaccatataaaactaccttcaaagaagatgcattacagaag
gcaaagttctttcaagataaaaagtatctttcaagagtagcaagaggcagcagagatgat
actattcgaaatcttaccagaaacacattccatacctttaaaaatggaaaaaaggtgata
aaagctgcttcaaaacaacatgataaaggacgtgcttga
DBGET
integrated database retrieval system
