Eumetopias jubatus (Steller sea lion): 114209290
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Entry
114209290 CDS
T07240
Symbol
PRKN
Name
(RefSeq) E3 ubiquitin-protein ligase parkin
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
eju
Eumetopias jubatus (Steller sea lion)
Pathway
eju04120
Ubiquitin mediated proteolysis
eju04137
Mitophagy - animal
eju04141
Protein processing in endoplasmic reticulum
eju05012
Parkinson disease
eju05014
Amyotrophic lateral sclerosis
eju05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
eju00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
114209290 (PRKN)
04120 Ubiquitin mediated proteolysis
114209290 (PRKN)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
114209290 (PRKN)
09160 Human Diseases
09164 Neurodegenerative disease
05012 Parkinson disease
114209290 (PRKN)
05014 Amyotrophic lateral sclerosis
114209290 (PRKN)
05022 Pathways of neurodegeneration - multiple diseases
114209290 (PRKN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
eju04131
]
114209290 (PRKN)
04121 Ubiquitin system [BR:
eju04121
]
114209290 (PRKN)
03029 Mitochondrial biogenesis [BR:
eju03029
]
114209290 (PRKN)
Enzymes [BR:
eju01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
114209290 (PRKN)
Membrane trafficking [BR:
eju04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
114209290 (PRKN)
Aggrephagy
Other aggrephagy associated proteins
114209290 (PRKN)
Xenophagy
Other xenophagy associated proteins
114209290 (PRKN)
Ubiquitin system [BR:
eju04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
114209290 (PRKN)
Mitochondrial biogenesis [BR:
eju03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
114209290 (PRKN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_14
zf-RING_12
ubiquitin
IBR_2
IBR_1
IBR
Rad60-SLD
Rad60-SLD_2
Dsc3_N
Crinkler
Motif
Other DBs
NCBI-GeneID:
114209290
NCBI-ProteinID:
XP_027959147
LinkDB
All DBs
Position
Unknown
AA seq
464 aa
AA seq
DB search
MIVFVRFNSSHGFPVEVDSDTSIFQLKEVVAKRQGVPADQLRVIFAGKELRNDLTVQSCD
LDQQSIVHVVLRPWRKGQEREATGQDGPGTAVEGSEKEPESLTRVDLSSSILPARSVGLA
VILNSDYAGTLPTGRPAGQGTYNSFYVYCKGPCQRVQPGKLRVQCSTCQQATLTLAQGPS
CWDDVLIPNRMTGECQSANCPGTTAEFFFKCGAHPTSDKETSVALNLITTNSRDITCITC
TDVRSSVLVFQCNHRHVICLDCFYLYCVTRLNDRQFIHDPQLGYSLPCVAGCPNSLIKEL
HHFRILGEEQYNRYQQYGAEECVLQMGGVLCPSPGCGAGLLPEPGVRKVTCEGGSSLGCG
FVFCRDCKEAYHEGECGTLFEASGAVTQAYRVDEKAAEQARWEEASKETIKKTTKPCPRC
HVPVEKNGGCMHMKCPQPQCGLEWCWTCSCEWNRDCMGDHWFDV
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgatagtgtttgtcaggttcaactccagccatggtttcccagtggaggtcgattccgac
accagcatcttccagctcaaggaggtggttgctaagcgacagggggttccagctgaccag
ttgcgtgtgattttcgcagggaaggagcttcggaatgacttgacagtgcagagctgtgac
ctggatcagcagagcatcgttcatgtcgtgctgagaccctggcgcaaaggccaagaaagg
gaggccactggacaggacggcccaggaactgccgtggagggctcggagaaagagcctgag
agcttgacgcgcgtggacctcagcagctccatcctcccggcccgctcggtgggtctggct
gtgatcctgaacagcgactatgcggggaccctgccaactggaaggccagcaggtcaagga
acctacaacagcttttatgtttattgcaaaggcccctgtcaaagagtacagccaggaaaa
ctccgggtgcagtgcagcacctgccagcaggcgacgctcaccttggcccagggtccatct
tgctgggacgatgtcttaatcccaaaccgaatgaccggtgaatgccaatctgcaaactgc
cctgggactacagccgaatttttctttaaatgtggagcacacccaacctctgacaaggaa
acgtcagtagctttgaacctgattacgacaaacagtcgagacatcacctgcataacgtgt
accgacgtcaggagctctgtcctggtttttcagtgcaaccaccgccacgtgatttgctta
gactgtttctacttatactgtgtgacaagacttaatgaccggcagtttatccatgaccct
cagcttggctactctctgccttgtgtggctggctgccccaactccttgattaaagagctc
catcacttcaggattcttggagaagagcagtataaccggtaccagcaatatggcgctgaa
gagtgtgtgctacagatggggggtgtgctgtgccccagccctggctgtggagcagggctg
cttcccgagccaggcgtgaggaaggtcacttgtgaagggggcagcagtctgggctgtggg
tttgtcttctgccgggactgtaaggaagcgtaccatgaaggtgaatgcggcaccctattt
gaagcctcaggagcagttactcaggcttacagagttgatgagaaggctgcggagcaagct
cggtgggaagaggcctccaaagaaacaatcaagaaaaccaccaagccctgtccccgttgc
catgtgcctgttgaaaaaaatggaggatgcatgcacatgaagtgcccacagccgcagtgc
gggctggagtggtgctggacctgcagctgtgagtggaaccgcgactgcatgggagaccac
tggttcgatgtgtag
DBGET
integrated database retrieval system
