Eumetopias jubatus (Steller sea lion): 114209827
Help
Entry
114209827 CDS
T07240
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
eju
Eumetopias jubatus (Steller sea lion)
Pathway
eju01524
Platinum drug resistance
eju03430
Mismatch repair
eju05200
Pathways in cancer
eju05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
eju00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
114209827 (MSH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
114209827 (MSH2)
09162 Cancer: specific types
05210 Colorectal cancer
114209827 (MSH2)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
114209827 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eju03400
]
114209827 (MSH2)
DNA repair and recombination proteins [BR:
eju03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
114209827 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
114209827
NCBI-ProteinID:
XP_027959840
LinkDB
All DBs
Position
Unknown
AA seq
934 aa
AA seq
DB search
MAVQPKETLQLESAAEVGFVRFFQAMPEKPTTTVRLFDRGDFYTAHHEDALLAAREVFKT
QGVVKYIGPAGTKTLESVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLA
FKASPGNLSQFEDILFGNNDMSASIGVVGVKISTVDGQRQVGVGYVDSIQRKLGLCEFPD
NDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQVIQRGGILITERKRADFFTKDIYQD
LNRLLKGKKGEQVNSAVLPEMENQVAASALSAVIKFLELLSDDSNFGQFELTTFDFSQYM
KLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERL
NLVEAFVEDAELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQA
LEKYEGKHQSLLLAVFVTPFIDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE
LREIMDDLEKKMQSTLVSAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFS
TVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLA
QLDAVVSFAHVSNGAPVPYVRPVILEKGQGKITLKASRHACVEVQDEVAFIPNDVHFEKD
KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK
GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF
ATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPRHV
IECARQKALELEEFQNIGDSQGYDDMEPAAKRCYLEREQGEKIIQEFLSKVKQVPFTEMS
EENITMKLKQLKAEVIAKNNSFVNEIISRIKVTT
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagccgaaggaaacgctgcagctggagagcgcggccgaagtcggcttcgtg
cgcttcttccaggccatgccggagaagccgaccaccacggtgcgcctcttcgaccggggc
gacttctacacggcgcaccacgaggacgcgctgctggctgctcgagaagtgttcaagacc
cagggggtagtcaagtacatagggccggcaggaacaaagactctggagagtgttgtgctt
agtaaaatgaattttgaatcttttgtaaaagatcttcttctagttcgccagtatagagtt
gaagtttataagaatagagctggaaataaagcctcaaaggagaatgattggtatttggca
tttaaggcttctccaggtaatctttctcagtttgaagacattctctttggtaacaatgat
atgtcagcttccattggtgttgtgggtgttaaaatatctacagttgatggccaaagacag
gtcggagttgggtatgttgactccatacagcggaagctaggactttgtgagttccccgac
aacgatcagttctccaatttggaggctctcctgattcagattggaccaaaggaatgtgtt
ttaccaggaggagagactgctggagacatgggaaaactgaggcaggttattcagagagga
ggaattctgatcacagaaagaaaaagagctgacttttttacaaaagatatttatcaggac
ctcaaccggttgttgaaaggcaaaaagggagaacaggtgaatagtgctgtcttgccagaa
atggagaatcaggttgcagcttcagcattgtctgcagtaatcaagtttttagaactctta
tcagatgattcaaactttggacagtttgaactgactacttttgacttcagccagtacatg
aagttggatattgcagcagtcagagcccttaaccttttccaggggtctgttgaagatact
actggctctcagtctctggctgcattgctgaataaatgcaaaacccctcaaggacaaaga
ctggttaaccagtggattaagcagcctctcatggataagaacagaatagaagagagactg
aatttagtggaagcttttgtagaagatgcagaattgaggcagagtttacaagaagattta
cttcgtcgattcccagatcttaaccgacttgccaagaaatttcagagacaagcagcaaac
ttacaggattgttaccgactctatcagggtataaatcaactccctaatgttattcaggct
ctggaaaaatatgaaggaaaacaccagagtttattgttggcagtttttgtcactcctttt
attgatcttcgttctgatttctccaaatttcaggaaatgatagaaacaactttagatatg
gatcaggtggaaaaccatgaattccttgtgaaaccttcatttgatcccaatctgagtgaa
ttgagagaaattatggatgacttggaaaagaagatgcagtcaacattagtaagtgcagcg
agagatttaggtttggatcctggcaaacagattaaactggattccagtgcacagtttggt
tattactttcgcgtaacatgtaaggaagaaaaagtccttcgtaacaataaaaacttcagt
acggtggacattcagaagaatggtgttaaatttaccaacagtaaactgacttctctcaat
gaagagtataccaaaaataaaaccgagtatgaggaagcccaggatgccattgttaaagaa
attgtcaatatttcttcaggctatgtagaaccaatgcagacactcaatgatgtgttagct
cagctagatgctgttgtcagctttgcacatgtgtcaaatggagcacctgttccatatgta
cgaccggtcattttggagaaaggacaaggaaaaattacattgaaagcatccagacatgct
tgtgttgaagttcaagatgaagttgcatttattcctaatgatgttcactttgaaaaagat
aaacagatgttccacatcattactggccccaatatgggaggtaaatccacatatattcgc
caaactggggtgatcgttctcatggcccagattgggtgttttgtgccatgtgagtcagca
gaagtgtccattgtggactgcatcctggcccgtgtaggggctggcgacagtcagttgaaa
ggagtctccacattcatggctgaaatgctagaaactgcttctattctcaggtctgcaacc
aaagattctttaataatcatagatgaattggggagaggaacctctacctatgatggattt
ggattagcgtgggctatatcagagtacatcgcaacaaagattggtgctttttgcatgttt
gcaacacattttcatgaacttactgccttggccaatcagataccaactgttaataatcta
catgtcacagcactaactactgaagagaccttaactatgctttatcaggtgaagaaaggt
gtctgtgatcaaagttttgggattcacgttgcagagcttgcaaatttccctaggcatgtc
atagagtgtgctagacagaaagctctggaactagaggagtttcagaatatcggagattca
caaggatatgatgacatggaaccagcagcaaagaggtgctatctggaaagagagcaaggt
gaaaaaattattcaggagtttttatccaaggtaaagcaagtgccttttactgaaatgtca
gaagaaaacatcacaatgaagctaaaacagctgaaagctgaggtaatagcgaagaataat
agttttgtaaatgaaatcatttcacgaatcaaagttactacatga
DBGET
integrated database retrieval system
