Eumetopias jubatus (Steller sea lion): 114212108
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Entry
114212108 CDS
T07240
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1 isoform X1
KO
K14315
nucleoporin NDC1
Organism
eju
Eumetopias jubatus (Steller sea lion)
Pathway
eju03013
Nucleocytoplasmic transport
eju05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
eju00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114212108 (NDC1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
114212108 (NDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eju03019
]
114212108 (NDC1)
Messenger RNA biogenesis [BR:
eju03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
114212108 (NDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
114212108
NCBI-ProteinID:
XP_027962639
LinkDB
All DBs
Position
Unknown
AA seq
810 aa
AA seq
DB search
MQRRPQFLASRWTPLRRELLDSRRRVLKSQSPLGDVSAGAFWRVGPVQTKPRGDWLGPAP
GFPQAAFEAAPTGSSWGLSPFELRWRAGALSPALLRVGAAITMATAASRPCDGGSRDILW
RVLGWRIVASIVWSVLLLPICTTVFIIFSSIDLFHPIQWLSDSFSDLYSSYVIFYLLLLS
VVEVIISIFNVEFYAVVPSIPCSRLALIGKIIHPQQLMHSFVHAAMGMLVAWCAAVITKG
QYSFLVVPCTGTESLNSPAAQTCLNECHLFFLLAGAFMGYSYSLLYFINNMNYLPFPIIQ
QYKFLRFRRSLLLLIKHSCVESLFLIRNFCIVYYFLGHIPKAWISTAMDLQIDEQFHRPL
DTVRGLLNLSLLYHVWLCGVFLLMTWYISWILFRIFATEAHLFPVQPPFSEESDECLPKV
LNSSPPLIIKYLALQDLMLLSQYSPSRRQEVFSLSQPGGHPHNWTAISRECLNLLNDMTQ
KLVLYQEAAATNGRMVSSYSVEPKKSNSPEETTFQTPKSSQLPRSSVPPLVKTSLFSSKL
STPDVGSPLRSPFGSSVVNRMAGIFDVNTCYGSSQSSQLIRRGPRLWTSASDQQMTEFSI
PSPSNSVSAEGKTARQPSLIYSWIQNKREQVKNFLSKRVLIMYFFSKHPEASIQAVFSDA
QMHIWALEGLSHLVAASFTEDRFGVVQTTLPAILNTLLTLQEAVDKYFKLPHASSKPPRI
SGSLVDTSYKTLRFAFRASLKTAIYRITTTFGEHLKSPARLPAARPALAPCTARWRRRTQ
TRGRRRPSALRVQAAGPLASAARTWPSGSP
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgccgcccccagtttctggcgtcccgctggaccccgcttcggagagagcttttg
gactccagaaggcgggtcctgaaatcccagtctcctttgggggacgtgtccgcgggcgcg
ttctggcgcgttgggcctgtgcagacgaagcctcgaggggattggttggggcctgccccg
ggcttccctcaggcagcgtttgaggcagccccaacagggtcctcctggggcctttctccc
tttgaactgcggtggcgggcgggcgcactgtctcctgcactcctcagagttggggccgcc
atcaccatggccacggctgcgagtcggccttgcgacggcgggtcgcgggacatcttgtgg
cgcgttttgggctggaggatagttgcaagtattgtctggtcagtgctgcttctacccatc
tgtaccacagtatttataatcttcagcagcattgatttatttcatcctattcagtggctc
tctgattctttcagtgatctgtatagttcctatgtaatcttttacctcctgctgctgtca
gtggtagaagtaataataagtatttttaatgtggagttctatgcagttgtgccttccatt
ccctgctccagactggcactgatagggaagatcattcaccctcagcagctcatgcactca
tttgtccatgctgcaatggggatgctcgtggcttggtgtgctgcggtgataaccaagggt
caatacagttttcttgtggttccctgcactggtactgagagtttaaatagccctgctgca
cagacctgcttaaatgagtgtcaccttttttttctactggctggagcatttatgggctac
agctatagtctcctgtattttattaacaacatgaactatctgccatttcccatcatccag
caatacaagttcttacgcttcaggagatctctgctcttgttaattaagcatagttgtgtg
gaatcactgtttctgattagaaatttctgcatcgtgtattattttcttggccatatcccc
aaagcttggattagcactgcgatggaccttcagatagatgagcagtttcacaggcctctt
gacactgtgcgtggcctcttgaatctctcattactctaccatgtctggctgtgtggtgtc
tttcttctgatgacttggtatatctcatggatactcttcagaatctttgccacagaggct
catctgttccctgttcagccaccattttcagaagagtcagatgaatgcctcccgaaggtt
ttgaacagcagtcctcccctcatcataaagtatttggccttgcaggacctgatgttgctt
tctcagtattctccttcacgaagacaggaagtttttagccttagccaaccaggtggacat
ccccataattggacagccatttcaagggagtgtttgaatcttttaaatgatatgactcag
aaactggttctctaccaagaagccgctgctacgaatgggagaatggtgtcctcatactct
gtggaacccaagaaatcgaattctccagaagaaactacttttcagaccccgaaatctagc
cagctacctcggtcttcagtgccaccgttagttaagacatcactgttttcctccaaatta
tctacgcctgatgttggaagtcccctcagaagcccatttggctctagtgtagtgaatcgg
atggctggaatttttgatgtaaatacctgctatggatcctcccaaagttctcagctaata
agaagagggccaagattgtggacttctgcttctgatcagcaaatgactgaattttctatt
ccttctccatctaactctgttagtgctgagggtaagacagcgagacaacccagtttgatt
tattcatggattcagaataaacgtgaacaggttaagaatttcttatcaaaacgggtgttg
ataatgtattttttcagtaagcacccagaggcctctattcaggctgttttttcagatgcc
caaatgcatatttgggcattagaaggtctgtctcacttagtagcagcatcatttactgaa
gatagatttggagttgtccagactacactaccagctattcttaataccttgttgacgctg
caagaggcagtcgataagtacttcaagcttcctcatgcttccagtaaaccacctcggatt
tcaggaagccttgtggacacttcttataaaacattaagatttgcatttagagcatcacta
aaaactgccatctatcgaataactactacatttggtgaacatttgaagagcccggcgcga
ctcccagcggctcgccctgccctggcgccatgcactgcgaggtggcggaggcgcactcag
acaagaggccgaaggaggccctcggcgctccgggtccaggccgcgggcccactggcctcg
gcggcacgcacatggccttcagggtcaccgtga
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