KEGG   Eumetopias jubatus (Steller sea lion): 114212108
Entry
114212108         CDS       T07240                                 
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1 isoform X1
  KO
K14315  nucleoporin NDC1
Organism
eju  Eumetopias jubatus (Steller sea lion)
Pathway
eju03013  Nucleocytoplasmic transport
eju05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:eju00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    114212108 (NDC1)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    114212108 (NDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:eju03019]
    114212108 (NDC1)
Messenger RNA biogenesis [BR:eju03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     114212108 (NDC1)
SSDB
Motif
Pfam: Ndc1_Nup
Other DBs
NCBI-GeneID: 114212108
NCBI-ProteinID: XP_027962639
LinkDB
Position
Unknown
AA seq 810 aa
MQRRPQFLASRWTPLRRELLDSRRRVLKSQSPLGDVSAGAFWRVGPVQTKPRGDWLGPAP
GFPQAAFEAAPTGSSWGLSPFELRWRAGALSPALLRVGAAITMATAASRPCDGGSRDILW
RVLGWRIVASIVWSVLLLPICTTVFIIFSSIDLFHPIQWLSDSFSDLYSSYVIFYLLLLS
VVEVIISIFNVEFYAVVPSIPCSRLALIGKIIHPQQLMHSFVHAAMGMLVAWCAAVITKG
QYSFLVVPCTGTESLNSPAAQTCLNECHLFFLLAGAFMGYSYSLLYFINNMNYLPFPIIQ
QYKFLRFRRSLLLLIKHSCVESLFLIRNFCIVYYFLGHIPKAWISTAMDLQIDEQFHRPL
DTVRGLLNLSLLYHVWLCGVFLLMTWYISWILFRIFATEAHLFPVQPPFSEESDECLPKV
LNSSPPLIIKYLALQDLMLLSQYSPSRRQEVFSLSQPGGHPHNWTAISRECLNLLNDMTQ
KLVLYQEAAATNGRMVSSYSVEPKKSNSPEETTFQTPKSSQLPRSSVPPLVKTSLFSSKL
STPDVGSPLRSPFGSSVVNRMAGIFDVNTCYGSSQSSQLIRRGPRLWTSASDQQMTEFSI
PSPSNSVSAEGKTARQPSLIYSWIQNKREQVKNFLSKRVLIMYFFSKHPEASIQAVFSDA
QMHIWALEGLSHLVAASFTEDRFGVVQTTLPAILNTLLTLQEAVDKYFKLPHASSKPPRI
SGSLVDTSYKTLRFAFRASLKTAIYRITTTFGEHLKSPARLPAARPALAPCTARWRRRTQ
TRGRRRPSALRVQAAGPLASAARTWPSGSP
NT seq 2433 nt   +upstreamnt  +downstreamnt
atgcagcgccgcccccagtttctggcgtcccgctggaccccgcttcggagagagcttttg
gactccagaaggcgggtcctgaaatcccagtctcctttgggggacgtgtccgcgggcgcg
ttctggcgcgttgggcctgtgcagacgaagcctcgaggggattggttggggcctgccccg
ggcttccctcaggcagcgtttgaggcagccccaacagggtcctcctggggcctttctccc
tttgaactgcggtggcgggcgggcgcactgtctcctgcactcctcagagttggggccgcc
atcaccatggccacggctgcgagtcggccttgcgacggcgggtcgcgggacatcttgtgg
cgcgttttgggctggaggatagttgcaagtattgtctggtcagtgctgcttctacccatc
tgtaccacagtatttataatcttcagcagcattgatttatttcatcctattcagtggctc
tctgattctttcagtgatctgtatagttcctatgtaatcttttacctcctgctgctgtca
gtggtagaagtaataataagtatttttaatgtggagttctatgcagttgtgccttccatt
ccctgctccagactggcactgatagggaagatcattcaccctcagcagctcatgcactca
tttgtccatgctgcaatggggatgctcgtggcttggtgtgctgcggtgataaccaagggt
caatacagttttcttgtggttccctgcactggtactgagagtttaaatagccctgctgca
cagacctgcttaaatgagtgtcaccttttttttctactggctggagcatttatgggctac
agctatagtctcctgtattttattaacaacatgaactatctgccatttcccatcatccag
caatacaagttcttacgcttcaggagatctctgctcttgttaattaagcatagttgtgtg
gaatcactgtttctgattagaaatttctgcatcgtgtattattttcttggccatatcccc
aaagcttggattagcactgcgatggaccttcagatagatgagcagtttcacaggcctctt
gacactgtgcgtggcctcttgaatctctcattactctaccatgtctggctgtgtggtgtc
tttcttctgatgacttggtatatctcatggatactcttcagaatctttgccacagaggct
catctgttccctgttcagccaccattttcagaagagtcagatgaatgcctcccgaaggtt
ttgaacagcagtcctcccctcatcataaagtatttggccttgcaggacctgatgttgctt
tctcagtattctccttcacgaagacaggaagtttttagccttagccaaccaggtggacat
ccccataattggacagccatttcaagggagtgtttgaatcttttaaatgatatgactcag
aaactggttctctaccaagaagccgctgctacgaatgggagaatggtgtcctcatactct
gtggaacccaagaaatcgaattctccagaagaaactacttttcagaccccgaaatctagc
cagctacctcggtcttcagtgccaccgttagttaagacatcactgttttcctccaaatta
tctacgcctgatgttggaagtcccctcagaagcccatttggctctagtgtagtgaatcgg
atggctggaatttttgatgtaaatacctgctatggatcctcccaaagttctcagctaata
agaagagggccaagattgtggacttctgcttctgatcagcaaatgactgaattttctatt
ccttctccatctaactctgttagtgctgagggtaagacagcgagacaacccagtttgatt
tattcatggattcagaataaacgtgaacaggttaagaatttcttatcaaaacgggtgttg
ataatgtattttttcagtaagcacccagaggcctctattcaggctgttttttcagatgcc
caaatgcatatttgggcattagaaggtctgtctcacttagtagcagcatcatttactgaa
gatagatttggagttgtccagactacactaccagctattcttaataccttgttgacgctg
caagaggcagtcgataagtacttcaagcttcctcatgcttccagtaaaccacctcggatt
tcaggaagccttgtggacacttcttataaaacattaagatttgcatttagagcatcacta
aaaactgccatctatcgaataactactacatttggtgaacatttgaagagcccggcgcga
ctcccagcggctcgccctgccctggcgccatgcactgcgaggtggcggaggcgcactcag
acaagaggccgaaggaggccctcggcgctccgggtccaggccgcgggcccactggcctcg
gcggcacgcacatggccttcagggtcaccgtga

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