Eumetopias jubatus (Steller sea lion): 114212405
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Entry
114212405 CDS
T07240
Symbol
FOCAD
Name
(RefSeq) focadhesin isoform X1
KO
K27498
focadhesin
Organism
eju
Eumetopias jubatus (Steller sea lion)
Brite
KEGG Orthology (KO) [BR:
eju00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eju03019
]
114212405 (FOCAD)
Messenger RNA biogenesis [BR:
eju03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
114212405 (FOCAD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Focadhesin
DUF3730
HEAT
Motif
Other DBs
NCBI-GeneID:
114212405
NCBI-ProteinID:
XP_027963074
LinkDB
All DBs
Position
Unknown
AA seq
1805 aa
AA seq
DB search
MSDDIRKRFEFPNSLIQSQAVGHLIAAVLKENGFSEKIHQSTNQTPALNLLWEKCCSDNV
VVRTACCEGLVALVAQDHAEFGYVLNGILNLIPATRNTHGLIKAIMKLLQMQAVKEGKGG
EKNIRNLYTIRNHPQPLITMLEHRPDCWPVLLQQLTAFFQQCPERSEVSCIQIMAPFLWY
LYCEPSQLQEYAKLRLMLLKVFLQPRALGDPEQPSVLEQQILQLCCDMVPCLQVKDLIQT
TEVMLFIEEVYLSLLRHPVFWKIQLTQLTLQLLCVCEVSLTITGECSSLIHLLEHGVELL
KEDFPVEPVTIGIALLLLQTPASQQKPILSLALKLLSVAEGQKIPRSSLVLVMPVLQILS
STALEDCISMDEEGPSRQQLALNLLEMVQQESYRDDHQKLSYKLAFPITSMYGSIFTAWR
ILEVMREKSAASDWLFSIESLLPITTVIPVHVFLLLAHLLVEDQGQNLHQILKVTTLLAQ
ADSSQVPNLIPVLMFKLGRPLEPVLYNDILYTLPTLGVHKVCIGQILRVIQLLGTTPQLR
AVTLRLLTSLWEKQDRVYPELQRFMALSDVPSLSVGKEVQWEKLIAKAASIRDICKQRPY
QHGADMLAAASQVLNECTKPDQATPAALVLQGLHALCQAEVVCIRSTWNALSPKLSCDTR
PLILKTLSELFSLVPSLTVNTAEYENFKVQVLSFLWTHTQNKDPVVANAAYKSLSHFRAG
ENTILHLPEEIRPEIPTPDELDEDEDDEGDEKDVDLSVPGSCYLKLLSLTAPLVLPALEE
FFTSLVKQEMVNMPRGVYHSALKGGVRSDQGKTVAGIPNFILKMYETNKQPGLKPGLAGG
MLFCYDVSTYQSKDGKPLNRLMANRGRSFKQTSLALVHEVHIQLSEWHRAIFLPQAWLAY
MSRAYHAILQGRTGELDLQLKHGKEGPEEVQYKKGTAWLWVRDMLTEEITKVAAKESPVV
KGNALLALSSLAVVVSKHEASLSSDSEGVPEVQPYFLSMKEWVSMVSDTLLVIVDSHYQP
RGQLFSSFYYKSYSGENTASAIARSAAATALSLLVPVFMISCKEKVEEILNMLAARLPGK
PRADESQAVQIHMGLALGMFLSRLCEEKLSDVSGQQMNLLLMKSLDALENCCFDPSLEYN
TGCILGVGLVLSLMSHSSQTESRVHVAASLRKLSTYLDDSGSQSRTFQEVLAYTLSCVCT
SAFSTGIVEAAEAEDIMNKLRVLVENNQQTSGFALALGNLVHGLSLCGHGKAEDVGHRLL
PAWIRVVLAEGTPTMLCLAALHGMVALVGSEGDVMQLKSEAIQSSHFQARLNEVIKTVTQ
VISVSGVIGLQSNALWLLGHLHLSTLSSSQSRTSVPTDYSYLPESSFIRAAVGFFVTGGK
KGPESVPPSHLKVVMKPIATVGESHQYPPVNWAALLSPLMRLNFGEEIQQLCLEIMVTQA
QSSQNAAALLGLWVMPPLIHGLSLNIKKYLLVSTPLWIKHVSDEQILGFFENVMVAVFKA
ASPLPHPELCTSALQGLSQAMKLPSPTHHLWSLLSEATGKIFDLLPNKIRRNDLELYVSI
AKCLSEMTDDEANRVAQITESSIEKAAFVRLYLVSQGRFPLMGLMDILSIAVQHREKDTL
AWMVLHSLYQARIVSHANTGVLKRMEWLLELMGYIRNIAYQSTSVQNVALDEALDFLLLL
FATAVVTWADHAAPLLLGLSASWLPWHREDGPAGSASSFLGRSPMHRVTLQEALTLLPSS
MPLLLQKEPWKEQTQKFIDWLFSIMESPKEGLSTKSRDLLKATLLSLRVLPEFKKKAVWT
RAYGW
NT seq
5418 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatgatatcaggaaaaggtttgaatttccaaattctcttatccaatcacaggct
gtgggtcatcttattgcggcagtcctgaaggaaaatggtttttcagaaaagatccatcaa
tccacaaaccagactccggctttgaacttgctgtgggagaagtgttgcagtgataatgtg
gtggttcgaacagcctgctgtgagggtctagtggcccttgttgctcaggatcacgcagag
ttcggctatgtgctcaatgggatactcaacctgattccagcgaccaggaatacacatggc
ttgataaaagccattatgaaattattacaaatgcaagctgttaaggaaggaaaaggtggg
gagaagaatattcggaatttatatactattagaaatcatcctcagcctttgatcactatg
cttgaacacagacctgattgctggccagtacttttgcagcagctgacggcttttttccag
caatgccctgaaaggtcagaagtttcatgtatccaaataatggcaccatttctatggtat
ttatattgcgaaccatcccagttgcaagaatatgccaaattgcgactaatgctgctcaaa
gtctttcttcaaccccgggctcttggtgacccagagcaaccatcagtcttggaacaacag
atacttcagctgtgttgtgacatggttccgtgtttgcaggtaaaagatttgatccagaca
acagaagtgatgctgtttattgaggaagtatatttaagccttctgcgtcatcccgttttc
tggaaaattcagcttacccagctgacccttcagctgctgtgtgtctgcgaagtcagctta
acaataactggggaatgctcatctttaattcaccttttagagcacggtgttgaacttctg
aaggaggattttcctgttgaaccggtcacaattggaatagctttactactgctacagact
ccagcaagtcagcagaaaccaatcctaagtctagctttgaagctcctctctgttgctgag
ggtcagaaaatcccaaggtcatccttggtgctagtgatgccagttctgcagatactgtct
tctactgccttggaagactgtatatccatggatgaagaaggtccctcgagacaacagttg
gctttgaaccttttggaaatggtacagcaggagtcctacagagacgaccaccaaaagctc
tcctacaagcttgcgttccccataaccagcatgtatggatcaatatttacagcctggagg
atcctcgaagtaatgagagaaaagtctgcggccagtgactggctgttttccatagagtcc
ttgctccctattaccacagtgattcctgtgcatgttttccttttgttggctcacctcctt
gttgaagatcaaggacagaatcttcaccagatactgaaggtcactacattattagcccaa
gcagattcctctcaggtaccaaatctgattccagttttaatgttcaaattgggaagacca
ctggaacccgtattatataatgacatcttgtatactttacctacacttggtgttcacaag
gtgtgtataggacagattctgcgagtgatccagcttcttggaaccactccacaactaaga
gctgtcactctgcgcttgttgacatctttgtgggaaaagcaggaccgtgtctaccctgaa
ctgcagcgtttcatggccttgtctgatgtaccttctctgtctgtgggcaaggaagtccag
tgggaaaaactcattgccaaagcagcatcaatcagagacatatgtaagcaaaggccctac
cagcatggcgcggatatgttggcagccgcttcccaggtgttgaatgaatgcaccaaacct
gatcaagccactccggcagccttggtcctccagggtcttcatgcgctctgccaagcggag
gtcgtttgcattcgctcaacttggaatgcactctccccaaagctcagctgtgacacgaga
cctctcattttgaagaccctcagtgaactgttttctctcgttccttccttaacagtcaat
acggctgaatatgagaattttaaagttcaagtcctcagcttcctctggacccacactcaa
aacaaggacccagttgtggcaaatgccgcatataaatctttgtcacacttccgtgcggga
gaaaacaccattcttcatctgcctgaagagataagaccggaaatccctactcccgatgag
ctagatgaagatgaagatgatgagggcgatgagaaggatgtggatctttctgttcctggc
tcttgctatctcaagctgttgtcacttactgctcctttggtcttaccagctttggaggaa
ttttttacatctcttgtgaagcaggaaatggtgaatatgccccgaggagtgtatcactct
gcattaaaaggaggtgtccggtcagaccaaggaaaaactgtagcaggaatccccaatttt
atattgaaaatgtatgaaaccaataagcagccaggtctgaaacctggccttgcaggtggt
atgttattttgttacgatgtttcaacctatcagagtaaagatggcaaaccattgaatcga
ctgatggccaatagagggcgaagtttcaagcagacctcactcgctctagtgcatgaggtt
cacatccagctttccgagtggcaccgggcaatctttctgccacaggcctggcttgcatat
atgagtcgagcttatcatgccattttacagggcaggacaggagagctggatttgcagttg
aaacacgggaaagaaggacccgaggaggtgcagtacaaaaaaggcacagcctggctctgg
gtccgagacatgttgactgaggagatcaccaaggtggcggccaaggagagcccagtggtc
aagggcaacgcgctgttagccttaagcagcctcgctgtcgttgtatccaaacacgaagcc
agtctctcctcagactcggagggggtcccggaggttcagccttatttcctttcaatgaag
gagtgggtttccatggtgtctgatactctcctggtcattgtggatagccattaccaaccc
agaggacaacttttctcctcgttttactacaaatcctattctggtgaaaacacagctagt
gcgattgcccgctctgctgctgccacggctttgtctctcctcgtgccagttttcatgatt
tcttgcaaagagaaggttgaggaaatcctaaacatgctggctgccaggttacctgggaaa
ccaagagctgatgagtctcaagccgtgcagatccacatgggccttgctttggggatgttt
ctctcgcgcttgtgtgaggagaaactcagcgatgtatctggccaacagatgaaccttctt
ctgatgaagtctctggatgccctggaaaattgctgctttgatcctagtcttgaatataac
acgggctgtatattgggtgttggacttgttctgtctctcatgagccacagcagccaaacg
gagtctcgagttcatgtggcagcatcgcttcggaagctctcaacgtacctagatgacagt
gggagccaaagcagaacatttcaggaggtcctggcctataccctcagctgtgtatgtacc
tcagcgttcagtaccgggatcgttgaggctgcagaggctgaagatatcatgaacaagctt
cgggtgttggtagaaaacaaccaacagacttcaggttttgccctggcattaggaaaccta
gttcatggtttgtccctgtgcggacatggaaaagctgaggacgtgggccacagactgctc
cccgcctggatcagagttgttctagcagagggcactcctacaatgctctgtttggcagcg
cttcacggcatggtggccttggtaggctctgaaggggatgtaatgcagctgaagtcagaa
gccatccagtcctctcattttcaagccagacttaatgaagtcattaaaactgtaactcag
gtcatcagtgtgtctggggtgattggtcttcaatcaaatgctctctggcttctaggacat
cttcatctgtctactctgtcctcaagtcagagtagaacctctgttcccaccgactacagc
tatttgcccgagagcagttttattagagcggccgtgggcttcttcgttacaggagggaag
aaaggtcccgaatctgtgcctccttcccatctcaaagttgtgatgaaacccattgcaacg
gttggagaaagccaccagtatcctcctgtgaactgggccgcgctcctctctccacttatg
aggctaaacttcggagaagagatacagcaactgtgccttgaaattatggtgacacaggcg
cagtcatcccagaatgcagctgcgctcttgggactgtgggtgatgccaccactgatccac
ggtctcagtttgaatatcaagaaatacctcctggtgtctacacctctgtggataaaacat
gtctctgatgaacagatcctgggcttttttgaaaacgtaatggtggcagtttttaaagca
gcctccccacttccgcatcctgagttatgcacaagtgccttacaggggctgagtcaggcc
atgaaactgcccagccctacccaccacctctggagtctgctctctgaagctactgggaaa
atttttgaccttctgccaaataagattcggagaaatgatctagagctgtatgtcagtata
gcaaaatgcctctcagaaatgacagatgatgaagccaatcgggttgcccagattactgag
agcagcatagaaaaggctgcctttgtcagactgtacttggtctctcaaggacgattcccc
ttgatgggtttgatggatatcctcagcattgctgttcagcaccgggaaaaagacacgcta
gcctggatggtactgcacagcctctaccaggcgcggattgtaagccacgcgaacacaggt
gtgttgaagagaatggaatggctcttggaattgatgggctatatcagaaatattgcatac
cagtcaacatctgttcagaatgtggctcttgatgaggctttggacttcttattgctgctg
tttgcaaccgcagtggtgacctgggcagaccacgcggcccctctcctccttggcctcagt
gctagctggttgccatggcatcgggaagatggcccagctgggtcagcttcaagcttcctt
ggcaggagtccaatgcacagggtcactctgcaggaggctctcactctccttcccagtagc
atgcctcttctgctacagaaagagccgtggaaggaacagacccagaagttcattgactgg
ctcttcagcatcatggaaagccctaaagaaggcctctccacaaaatccagggatcttcta
aaagctaccctgttgtccttgagagttctcccagagtttaagaagaaggctgtatggacc
agagcatacggttggtga
DBGET
integrated database retrieval system
