Eumetopias jubatus (Steller sea lion): 114213226
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Entry
114213226 CDS
T07240
Symbol
CHD5
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
eju
Eumetopias jubatus (Steller sea lion)
Brite
KEGG Orthology (KO) [BR:
eju00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
eju03036
]
114213226 (CHD5)
Chromosome and associated proteins [BR:
eju03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
114213226 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
HDA2-3
ResIII
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
114213226
NCBI-ProteinID:
XP_027964104
LinkDB
All DBs
Position
Unknown
AA seq
2049 aa
AA seq
DB search
MAPHSPRAILMLYFLGNTSYSLEYYRQLTSVSLGSPLECDSFDHPLGLAPGTVGTQETVV
VSMCRPPGPLALHHSCSAALGLSSKLSPARTWRQLIPKWRSLRPEELMLLFFPTPGSVRP
ALGTEAEEEDGGLGGFDDYFPEEPVGLPKKKKSKKLKENRSKGKRKKKEGSNDELSENEE
DLEEKSESEGSDYSPNKKKKKKLKDKKEKKAKRKRKDDDDDDNDDGCLKEPKSSGQLMAE
WGLDDVEYLFSEADYHTLTNYKAFSQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNP
FKGSSAAAAAAAVAAAVETVTIAPPLAVSPQQAPQPVPIRKAKTKEGKGPGVRKKIKGSK
DAKKKGKGRKVAGLKFRFGGISNKRKKGSSSEEDEREESDFDSASIHSSSVRSEGSTALG
KKSKRRRKKRRIDDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEG
KWSCPHCEKEGIQWEPKDDEDDEEEGGCEEEEDDHMEFCRVCKDGGELLCCDACPSSYHL
HCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWRWTEPPAPFMVGLPGPDVEPGVPPP
KPLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPPPFDYGSGD
EDGKSEKRKNKDPLYAKMEERFYRYGIKPEWMMIHRILNHSFDKKGDVHYLIKWKDLPYD
QCTWEIDDIDIPYYDNLKQAYWGHRELMLGEDARLPKRLVKKGKKLKDDKQEKPPDTPIV
DPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLY
SLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDN
AIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFF
RVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKL
HDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQV
SLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEG
HRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLST
RAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQ
VAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDDVEGMMSQGQRPVTPIP
DVQSSKGGALAASAKKKHGSTPPGDNKDVEDSSVIHYDDAAISKLLDRNQDATDDTELQN
MNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLG
KGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDEDEDFEERPEGQSGRRQSRRQL
KSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKS
EKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHV
NGKYSTPDLIPEGPEGKKPSEVISSDPNTPVPASPAHLLPTPLGLPDKMEAQLGYMDEKE
LGVQKPKKPPEIQALPTSLDRVEGEDKHESADGKERLEETEKAPPSPEQLPKEEVLPEKE
KILDKLELSLIHSRGDGSDFRPDDTKVEEKEPLDTQQNGDKEEDEEGKKEDKNGKFKFMF
NIADGGFTELHTLWQNEERAAVSSGKIYDIWHRRHDYWLLAGIVTHGYARWQDIQNDPRY
MILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQDPNHPAMAL
NARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTRLPSMLSRI
PPVAARLQMSERSILSRLTNRAGDPTIQQGAFGNSQMYNNNFGPNFRGPGPGGIVNYNQM
PLGPYVTDI
NT seq
6150 nt
NT seq
+upstream
nt +downstream
nt
atggccccacactcccccagggccattttaatgctttattttcttggcaacacttcctac
tctctggaatattaccgccagctcacttctgtgtctctgggctcccccctcgagtgtgac
tcctttgatcacccgctaggcctggcacccggcaccgtgggtactcaggagacggttgtg
gtctccatgtgccggccccctggccccctggccctccatcacagctgctctgcggccctc
ggcctgagctcgaagctgtcacctgctcggacctggcgccagctgattccaaaatggcgc
agtttgcggcccgaggagctcatgttgctcttcttccccacaccgggctcggtgcggcca
gcactcggcactgaggcagaagaagaagatgggggcctcggaggctttgatgactatttc
cctgaggagcccgtgggccttcccaagaagaagaaatccaagaagctcaaggagaaccgg
tccaaagggaagcggaagaagaaagaggggagcaatgacgagctgtcggaaaatgaggag
gatctggaagagaagtcggagagtgagggcagtgactactcccctaataaaaagaagaag
aaaaaactcaaggacaagaaggagaaaaaagccaagcgcaaaaggaaggatgatgacgac
gatgataatgatgacggctgtctgaaggagcccaagtcctcggggcagctgatggctgag
tggggcctggatgatgtggagtacctgttctcggaggcggactaccacacgctgaccaac
tacaaggccttcagccagttcctcaggccgctcattgccaagaagaacccgaagatcccc
atgtccaaaatgatgaccgttctgggagccaagtggcgggagttcagcgccaacaaccct
ttcaaggggagctcggcagcggcagctgcagcggcggtggccgcggccgtggagaccgtc
accattgcccctccactggctgtcagcccccagcaggcaccccagcctgtacctatccgc
aaggccaagaccaaggagggcaaggggccaggagtgaggaagaagatcaaagggtccaag
gatgcaaagaaaaagggcaaggggagaaaggtagccgggctcaagttccgctttggaggg
atcagcaacaagaggaagaaaggctcctcgagcgaggaagatgagcgggaggagtcggac
ttcgacagcgccagcatccacagctcgtccgtgcgctcggagggctccacagccctgggg
aagaagagcaagcggcggcgcaagaagaggaggattgacgatggtgatggctacgagacg
gaccaccaggactactgtgaggtgtgccagcagggcggggagatcatcctgtgtgacacc
tgcccgcgggcctaccacctcgtctgcctcgatccagagctggagaaggctcccgagggc
aagtggagctgtccccactgtgagaaggaggggatccagtgggagccaaaggacgacgaa
gacgacgaggaggagggcggctgcgaggaggaggaggacgaccacatggagttctgccgc
gtgtgcaaggacgggggcgaactgctctgctgcgacgcgtgcccctcctcctaccacctg
cactgcctcaacccgccgctgcccgagatcccaaacggtgaatggctctgcccgcgctgt
acttgccccccgctgaagggcaaagtccagcggatcctacactggaggtggacagagccc
cccgcccccttcatggtggggttgccggggcccgacgtggagcctggtgtccccccaccc
aagcccctggagggcattccagagagagagttctttgtcaagtgggctgggctctcctac
tggcactgctcctgggtgaaggagcttcagctggagctataccacacagtcatgtatcgc
aactaccaaagaaagaatgacatggacgagccaccgccctttgactacggctctggcgat
gaggatggcaagagcgagaaaaggaagaacaaggaccctctctacgccaagatggaggaa
cgcttctaccgctacggcatcaagcccgagtggatgatgatccaccgcatcctgaaccac
agcttcgacaagaagggggatgtgcactacctgatcaagtggaaagacctgccctatgac
cagtgcacctgggagattgacgacatcgacatcccctactatgacaacctgaagcaggcc
tactggggccacagggagctgatgctgggtgaagatgctaggctgcccaagaggctggtc
aagaagggcaagaagctgaaggatgataaacaggagaagccaccagacacacccattgtg
gatcccacggtcaagtttgacaagcagccttggtacatcgactccacgggtggcacgctg
cacccataccagctggagggcctcaactggctgcgcttctcctgggcccagggcacagac
actatcctggctgacgagatggggctgggcaagaccgtgcagaccatcgtcttcctctac
tccctgtacaaggaggggcactccaaggggccctacctggtcagcgcgcccctgtccacc
atcatcaactgggagcgtgagtttgagatgtgggcacccgacttctatgtggtcacctac
acgggggacaaagagagccgctccgtgatccgggagaatgagttttcttttgaggacaac
gccattcggagtgggaagaaggtgttccgcatgaagaaagaagtgcagatcaaatttcat
gtcctgctcacctcctatgaactcatcaccatcgaccaggccatcctgggctccatcgag
tgggcctgcctagtggtggacgaggcccaccggctcaagaacaaccagtccaagttcttt
agggtcttgaacagctacaagatcgattacaagctgctgctgacagggactccgctgcag
aacaacctagaggagctgttccatcttctcaacttcctgactccagagaggttcaacaat
ctggagggcttcctggaggagtttgccgatatctccaaggaagaccagatcaagaagcta
cacgatctgctggggccacacatgctgaggcggctcaaggctgatgtattcaagaacatg
ccggccaagaccgagctgatcgttcgtgtggagctgagccagatgcagaagaagtactac
aagttcatcctcacacggaacttcgaggcactcaactccaaggggggtgggaaccaggtg
tcgctgctcaacatcatgatggatctgaagaagtgttgcaaccacccctacctcttccct
gtggctgccgtggaggcccctgtcttgcccaatggctcctatgatggcagctccctggtc
aagtcttcaggcaagctcatgcttctgcagaagatgctcaagaagctgcgggacgaaggg
caccgtgtgctcatcttctcccagatgaccaagatgctggaccttctggaggacttcctg
gagtatgagggctacaagtatgagcggattgatggtggcatcactgggggcctccgacaa
gaggcgatcgacagattcaatgcccctggggcgcagcagttctgcttccttctctcgacc
cgggcggggggcctgggcatcaacctggccacagcagacaccgtcatcatctacgactcg
gactggaatccacacaatgacatccaggccttcagccgcgcccaccgcattggacagaac
aagaaggtgatgatctaccgcttcgtgactcgggcctcggtggaggagcgcatcacacag
gtggccaagcgcaagatgatgctcacccacctggtggtgcggcccggcctcggctccaag
tccggctccatgacgaagcaggagctggacgacatcctcaagttcggcacagaggagctc
ttcaaggacgacgtggagggcatgatgtctcagggccagaggccggtcacgcccatccct
gatgtccagtcctccaaagggggagccctagctgccagcgccaagaagaagcatggcagc
accccgccaggcgacaacaaggacgtggaggacagcagtgtgatccactatgacgatgcg
gccatctccaagctgctggaccgaaaccaggacgccacggacgacacggagctgcagaat
atgaacgagtacctgagctccttcaaggtggcgcagtacgtggtgcgcgaggaggacggc
gtggaggaggtggagagggagatcatcaagcaggaggagaacgtggaccccgactactgg
gagaagctgctgcggcaccactacgagcagcagcaggaggacctggcccgcaatctgggc
aagggcaagcgcatccgcaagcaggtcaactacaacgacgcctcccaggaggaccaggag
tggcaggacgagctctcggataaccagtccgaatattccatcggctccgaggatgaggac
gaggactttgaggaaaggcccgaagggcagagtggacggcgacaatccaggaggcagctg
aagagcgacagggacaagcccctgccacctctcctcgcccgtgtgggtggcaatatcgag
gtgctgggcttcaacgcccggcagcggaaggcctttctgaacgccatcatgcgctggggc
atgcccccccaggacgccttcaactcccactggctggtgcgggaccttcgagggaagagc
gagaaggaatttagagcctatgtgtccctcttcatgcggcacctgtgtgagccgggggct
gatggcgcggagaccttcgcggacggcgtgccccgtgagggcctctcgaggcagcacgtg
ctcacccgcatcggggtcatgtcactagttaggaagaaggttcaggagtttgagcacgtt
aacgggaagtacagcaccccggacttgatccccgaggggcccgagggcaagaagccaagc
gaggtcatctcctcggaccccaacacgccagtgcccgccagccctgcccacctcctgccg
accccactgggcctgccagacaaaatggaagcccagctgggctacatggatgagaaggag
ctgggggttcagaagccgaagaagcccccagaaatccaggccctgccaacttccctggac
agggtggagggcgaggacaagcatgagagcgcagatggcaaggagcggctggaggagacc
gagaaggccccgccatccccagagcagctgccgaaagaagaagtgcttcctgagaaggag
aaaattctggacaagctggagctaagcttgattcacagcagaggggatggcagtgatttc
aggccagatgacaccaaagtggaggagaaggagccccttgacacacagcaaaatggtgac
aaagaggaagatgaggaagggaagaaggaggacaagaatgggaagttcaagttcatgttc
aacattgcagacgggggcttcacagagctgcacacactgtggcagaacgaggaacgtgct
gctgtgtcctcggggaaaatctatgacatctggcaccggcgccatgactactggctgctg
gccggcatcgtgacgcatggctacgcccgctggcaggacatccagaatgacccaagatac
atgatcctcaacgagcccttcaagtctgagatccacaagggtaactacttggagatgaag
aacaagtttctggcccgcaggttcaagctgctggaacaggcactggtcatcgaggagcag
ctccggagggccgcgtaccttaacatgacccaggaccccaaccaccccgccatggccctc
aacgcccgcctggctgaggtggagtgcctggccgagagccaccagcacctgtctaaggag
tccctcgccgggaacaagccggccaatgccgtcctgcacaaggtcctgaaccagctggag
gagctgctgagtgacatgaaggcggatgtgacgcgcctgccctccatgctgtcccgcatc
cccccggtggctgcccgtctccagatgtcggagcgcagcatcctgagccgcctgaccaac
cgagctggtgaccccaccatccagcagggcgctttcggcaactcccagatgtacaacaac
aactttgggcccaacttccggggccctggaccgggagggattgtcaactacaaccagatg
cccctggggccctatgtgaccgatatctag
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integrated database retrieval system
