Eumetopias jubatus (Steller sea lion): 114213481
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Entry
114213481 CDS
T07240
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
eju
Eumetopias jubatus (Steller sea lion)
Pathway
eju03013
Nucleocytoplasmic transport
eju03015
mRNA surveillance pathway
eju03040
Spliceosome
eju05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
eju00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114213481 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
114213481 (NCBP1)
03015 mRNA surveillance pathway
114213481 (NCBP1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
114213481 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eju03019
]
114213481 (NCBP1)
03041 Spliceosome [BR:
eju03041
]
114213481 (NCBP1)
Messenger RNA biogenesis [BR:
eju03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
114213481 (NCBP1)
Spliceosome [BR:
eju03041
]
Common components
Common spliceosomal components
Cap binding complex
114213481 (NCBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G
MIF4G_like
Cob_adeno_trans
DUF2524
Motif
Other DBs
NCBI-GeneID:
114213481
NCBI-ProteinID:
XP_027964492
LinkDB
All DBs
Position
Unknown
AA seq
790 aa
AA seq
DB search
MSRRRHSDENDGGQPHKRRKTSDANETEDHLESLICKVGEKSACSLESNLEGLAGVLEAD
LPNYKSKILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAMIRQLKESLKANN
YNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRRDWYVYAFLSSLPWV
GKELYEKKDAEMDRIFANTESYLKRRQKTHVPMLQVWTAEKPHPQEEYLDCLWAQIQKLK
KDRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDPEG
PVMPGSHSVERFVIEENLHCIIKSHWKERKTCAAQLVSYPGKNKIPLNYHIVEVIFAELF
QLPAPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCVDRFINWFSHH
LSNFQFRWSWEDWSDCLTQDPESPKPKFVREVLEKCMRLSYHQRILDIVPPTFSALCPAN
PTCIYKYGDESSNSLPGHSVALCLAVAFKSKATNDEIFSILKDVPNPNQDDDDDEGFSFN
PLKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVMFEVWRNHPQM
IAVLVDKMIRTQIVDCAAVANWIFSSELSRDFTRLFVWEILHSTIRKMNKHVLKIQKELE
EAKEKLARQHKRRSDDDDRSSDRKDGALEEQIERLQEKVESAQSEQKNLFLVIFQRFIMI
LTEHLVRCETDGTSVLTPWYKNCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDPHILA
VFQQFCALQA
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcggcggcacagcgacgagaacgacgggggacagcctcacaaaaggagaaag
acttctgacgccaatgaaactgaagatcatttggaatcgttaatatgcaaagtaggagaa
aagagtgcctgctctctggagagcaacctagaaggcttggcaggtgttttagaagctgat
cttcctaactacaagagcaagatcttaaggcttctttgtacagttgcacgcctgttacct
gagaagttgacaatttatacaacattagttggactactgaatgccaggaattacaacttt
ggtggagagtttgtagaagctatgattcgacaacttaaagaatcattgaaagcaaacaat
tataatgaagctgtatatttggtccgttttttatctgatcttgtgaattgtcatgtcatt
gctgccccatccatggttgctatgtttgaaaattttgtaagtgtaactcaggaagaagat
gtacctcaggtgcggcgagattggtatgtttatgcatttctgtcgtctttgccctgggtt
ggaaaggagttgtatgaaaagaaagatgccgagatggaccgcatctttgccaacactgaa
agctatcttaaaagacgccaaaagacacatgtgcccatgttacaagtatggactgctgag
aaaccacatccgcaagaagagtatttagattgcctgtgggcccagattcagaaattgaaa
aaggatcgctggcaggagcggcacatcctaagaccttatcttgcctttgacagcatccta
tgtgaagcactgcaacacaatctgcctccttttacaccacctcctcacacagaagattcc
gtgtacccgatgccacgggtcatcttcagaatgtttgattacacagatgatcccgagggt
cctgtaatgccagggagtcattcagttgaaagatttgtcatagaagagaatcttcactgt
atcattaagtcccactggaaggaaaggaagacttgtgctgcacagctggtgagctatcca
gggaagaacaagatccccttgaactaccacatagttgaggtgatctttgcagagctgttt
cagcttccagcaccgccgcacattgatgtgatgtacacaacactgctcatcgagctgtgc
aaacttcagcctggctctctaccccaagttcttgcacaggcaactgaaatgttgtacatg
cgtttggacacaatgaacactacatgtgtagacaggtttattaattggttttcccatcat
ctaagtaacttccagttccgctggagctgggaagattggtcagattgtcttactcaagat
cctgaaagtcccaaaccaaagtttgtaagggaagttctggaaaaatgtatgaggttgtct
tatcatcagcgtatattagatattgttcctcctaccttctcagctctatgtcctgcaaac
ccaacctgcatttacaagtacggagatgaaagtagcaattctcttcctggacattcagtt
gccctctgtttagctgttgcctttaaaagtaaagcaaccaatgatgaaatcttcagcatt
ctgaaagatgtaccaaatcctaaccaggatgatgatgacgatgaaggattcagctttaac
cctttgaaaatagaggtcttcgtacagactctgctacacttggcagccaaatcattcagc
cactcctttagtgctcttgcaaagtttcatgaagtcttcaaaaccctggctgagagtgat
gaaggaaagttacatgttctaagagttatgtttgaggtctggaggaaccatccacagatg
attgctgtactggtagataagatgatccgtacacagattgttgactgtgctgcagtggca
aattggatcttctcttcagaactgtctcgagactttactagattatttgtttgggaaatc
ttgcactccacaattcgtaagatgaacaaacacgttctcaaaatccagaaagagctggaa
gaagcaaaagaaaaactcgcaaggcaacacaaacggcgaagtgacgatgatgacagaagc
agtgacaggaaagatggggctctggaggagcaaatagaaagattgcaagaaaaagtggaa
tctgctcagagtgaacagaagaacctcttccttgtcatattccagcgttttatcatgatc
ttgaccgagcacttagtacgatgtgagactgatgggaccagcgtattaaccccatggtat
aagaactgtatagagaggctccagcagatcttcttacagcatcaccaaataatccagcag
tacatggtgaccctggagaacctgctcttcactgctgagttagatcctcatatcctggct
gtgttccagcagttctgtgccctacaggcctga
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