Eumetopias jubatus (Steller sea lion): 114213722
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Entry
114213722 CDS
T07240
Symbol
SCARF1
Name
(RefSeq) scavenger receptor class F member 1 isoform X1
KO
K24318
scavenger receptor class F member 1
Organism
eju
Eumetopias jubatus (Steller sea lion)
Pathway
eju04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
eju00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
114213722 (SCARF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
eju04131
]
114213722 (SCARF1)
Membrane trafficking [BR:
eju04131
]
Endocytosis
Phagocytosis
Scavenger receptors
114213722 (SCARF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_2
EGF_PEAR1L
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
114213722
NCBI-ProteinID:
XP_027964775
LinkDB
All DBs
Position
Unknown
AA seq
828 aa
AA seq
DB search
MGLRLLPLLLLWTQGTQGSKLDPSGRHVCKASSPSAELQCCPGWRQKDQECTVPICEGVD
ACQEDEVCVKPGLCRCKPGFFGARCNSRCPGQYWGPDCREICACHPHGQCEPATGVCHCL
ADRWGGRCEFACACGPHGRCDPATGACRCEPGWWSSTCRRPCQCNPAAARCDPTDGSCRC
EPGWWGRRCSFRCACHGSPCAQETGRCACRPGWWGPDCRQPCECVRGRCSAASGQCACPP
GFRGARCELPCRAGSYGPHCGDSCGHCRQKEPCSADTGNCASCEPGWNGTQCHQPCPPGT
FGESCRELCPHCRLGEACQPDTGHCQRCDPGRLGPRCEEPCPTGTFGEGCSSTCPTCVQG
TCDAVTGECVCNAGYWGPSCNTSCPPGFHGNNCSDPCECPEGPCTPISGACQLGPRSQDA
ALIAGILVPLLLLLLGIIFCVCCCRAARLDPKDGAASDGAAVSRMKLQVWGALSSLGSVL
PCGSFSSHKLPWVTVSHHDPEIPFNHSFIEPPSAGWASDDSFSSDPESGEDESPAYCVPP
QEGMVTVAHGEFPEASLAGGPIPPPEDASTPFPIPRTSSLARAKRPSVSFAEGTKFAPQS
RRSSGEISSPLRKPKRLSRGPQLGPESQEAEESMGSERAEMDDTLPGAASPRDSATGRRR
LPLGGRTVAERVEAIEGSVLEGSGSVTTIYMLAGTPQLPEGPVRSVLRRFGSFQKGQAEP
KVKSAIPKPPRRALSRNKGSPGLASGSASQSPSLAPNDELTRPLESAGTGPEEVARGLGD
GTKSSGRAQELAPEGGPQEQDPQKLADGEGQEEPQYENVAPISGPPAP
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggggctgaggcttctcccactgttgctgctctggacacaggggacccaggggtccaag
ctggaccccagtgggcggcatgtctgcaaagccagcagcccctctgctgagctccagtgc
tgcccaggctggaggcagaaagatcaagaatgcactgtccccatctgtgagggggtagat
gcctgccaggaagatgaagtatgtgtgaaaccaggcctctgtcgatgcaaacctggattc
ttcggggcccggtgcaactcccgctgcccgggccagtactggggccccgattgccgtgag
atctgtgcgtgccacccacacggccagtgcgagccggccacgggcgtgtgccactgccta
gcggaccgctggggcggccgatgcgagttcgcgtgcgcctgcggcccccacgggcgttgc
gaccccgcgacaggcgcgtgccgctgcgagcccggctggtggtcgtccacttgtcgccgt
ccgtgccagtgcaacccggcggcggcgcgctgcgatccaaccgacggctcctgccgctgc
gagccgggctggtggggccgccgctgcagcttccgctgcgcctgccacggctcgccgtgt
gcgcaggagacgggccgctgcgcctgccggccgggctggtggggccccgactgccggcag
ccgtgcgagtgcgtgcgcggccgctgcagcgccgcctccggccagtgcgcctgcccgccc
ggcttccgcggcgcccgctgcgagctgccctgccgcgccggcagctacgggcctcactgc
ggcgacagctgtggccactgcaggcagaaggagccgtgctctgcagacacaggcaactgt
gcgtcctgtgagccgggctggaacgggacccagtgccaccagccctgcccgcctggcacc
tttggcgagagctgcagggagctgtgcccccactgccggcttggggaggcctgtcagcca
gacaccgggcactgtcagcgctgtgaccctgggcggctagggcccaggtgtgaagagccc
tgcccgaccggcacctttggggagggctgtagctctacctgccccacctgtgttcaggga
acctgtgatgctgtgactggggaatgtgtctgcaacgctggctactggggacccagctgc
aacacatcatgcccacctggcttccatggtaacaactgctcagatccctgtgaatgccca
gagggaccctgcacccctatctctggggcctgccagctggggcctcgcagtcaggatgcg
gccctcattgcaggcatccttgtaccgctgctgctactcctcctgggcatcatcttctgt
gtctgctgctgccgggctgctcggttggaccccaaggacggggcagcaagtgatggagct
gctgtgtctaggatgaagctgcaggtctggggggcactgagcagcctgggctcggtgcta
ccctgtggttccttcagcagccataagcttccctgggtaacagtctcgcaccacgacccg
gagatccccttcaaccacagcttcatcgagccgccctctgcgggctgggcctcagacgac
tccttctcttctgatcctgagtctggagaggacgagagcccggcctactgtgtgccaccc
caagaagggatggtcactgtggcccacggagagtttccagaggccagcctggctggaggt
cccatccctccccctgaggatgcctccacaccattccccatcccacgcacttccagtctc
gcacgggccaagcggccatcagtctcctttgccgaaggcaccaagtttgcaccacagagt
cgccgaagctcaggggagatctccagtcctctccgaaagcccaagaggctctcccggggg
ccccagctgggtcctgaaagccaggaggctgaggagtccatgggctcagagagagcagaa
atggatgacacccttcctggtgctgccagccccagggattcagccactggccgccgccgg
ctcccccttggtggccggacagtggctgagcgtgtagaagccattgagggcagtgtcttg
gagggctcaggctctgtgaccacaatctacatgctggcagggacaccccagttacccgag
ggccccgtccgatctgttctccgccgttttggtagcttccagaaaggccaggcagagccc
aaggtcaagagtgccatccctaagcctccacgccgggcccttagtcgaaataagggcagc
cctgggctggcctctggttctgccagtcagagccccagcttagccccgaatgatgagctc
actaggcccttggagtctgcaggaactgggccagaggaagtggccagggggctaggggat
ggcaccaagagctcaggtagggcccaggagctggcccctgagggtggtccccaagaacag
gatccccagaagctggctgatggggaagggcaagaggagccccagtatgagaatgttgca
cccatctctgggccaccagcaccctaa
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