Eumetopias jubatus (Steller sea lion): 114214111
Help
Entry
114214111 CDS
T07240
Symbol
COL13A1
Name
(RefSeq) collagen alpha-1(XIII) chain
KO
K16617
collagen type XIII alpha
Organism
eju
Eumetopias jubatus (Steller sea lion)
Pathway
eju04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
eju00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
114214111 (COL13A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
eju00536
]
114214111 (COL13A1)
Glycosaminoglycan binding proteins [BR:
eju00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
114214111 (COL13A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
114214111
NCBI-ProteinID:
XP_027965326
LinkDB
All DBs
Position
Unknown
AA seq
778 aa
AA seq
DB search
MVAERARKAAAAGARGPGEPGAPAAVAPAERCARLPSPGSCGLLALALCSLALSLLAHFR
TAELQARVLRLEAERGEQQMETAILGRVNQLLDEKWKLHSRRRREALPKTSSGCHCPPGP
PGPAGRPGLPGDKGAIGMPGRVGVKGQPGEKGAPGDAGMSIIGPRGPPGQPGTRGFPGFP
GPIGLDGKPGHPGPKGEMGLTGPRGQPGPQGQKGEKGQCGEYPHREHLSSTLSALRSNQI
ITLKLLPLLNSVRLAPPPVIKRRTFQGEQGQAGIQGPPGPPGPPGPSGPLGPPGLPGPMG
PPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAKGAPGIAVVGMKGEPGTPGAKGE
KGAVGSPGLFGLMGQKGEKGDAGNSIGGGRGEPGPPGLPGPPGPKGEAGVDGQAGPPGRQ
GDKGEPGAAGDQGPAGPKGTKGEPGKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGP
PGAPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKFGPTGMKGEHGHPGSPGE
KGEKGETGQAGPPGLDGPTGEKGEPGGQGRPGATGLPGPIGLPGFTGEKGEPGEKGEPGV
EVPGPPGPEGPPGPPGLQGVPGPKGEAGLDGAKGETGVQGEKGDRGPLGLPGASGLDGRP
GPPGTPGPIGVPGPAGPKGERGSKGDLGVTGPTGAAGLPGLHGPPGDKGNRGERGKKGSR
GSKGDKGDQGAPGLDAPCPLGEDGLPVQGCWNKVDPAIRSLRIVTVVLLSPALGKASS
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggtagcggagcgcgcccgcaaagcggcagcagccggtgcccgcggcccgggggagccg
ggcgcgcccgcggcggtggcgccggccgagcgctgcgcgcggctgccgagcccggggtcg
tgcgggctgctggcgctggccctgtgctcgctggcgctcagcctgctcgcccactttcgg
accgccgagctgcaggcccgggtgctgcgcctggaagcggagcgtggggagcagcaaatg
gagacggctattttgggacgagtcaaccaactgctggatgagaaatggaagctccactct
cggaggcgccgggaggccctcccgaagacgtcttcagggtgtcactgtccgccaggacct
cctggtcctgctggaagacccggcctcccaggggacaaaggtgccattgggatgcctgga
cgtgtgggagtaaagggccaaccaggcgagaagggggccccaggagatgccggcatgtcc
atcatcggcccccgcggccctcctggtcagccgggcactcgaggtttccctggatttccg
ggtcccattgggctcgatggcaaaccgggccaccccggacccaaaggggagatgggcctg
acgggtccccgaggacagccgggacctcaagggcaaaaaggagaaaagggtcagtgtgga
gagtacccacatcgggagcacctaagcagcactctttcggctctgcgctccaaccagatc
attaccctcaagctgctgcctctcctcaattcagtgcgactggctccacccccagtcata
aaaagacggaccttccagggtgaacagggccaggccggcatccaaggcccgccggggcca
ccaggcccgcctggaccaagtggacctctggggcccccgggactgccagggcccatgggg
ccacccggcttacccgggcctcctggaccaaagggagacccaggaatccagggctaccac
ggccggaagggagaacggggcatgccagggatgccgggcaaacatggagcaaagggagct
cctggaattgctgtggttgggatgaagggggagcccgggacccccggagccaagggcgaa
aagggggctgtaggctcccctgggctattcggcctcatggggcagaagggagaaaaaggc
gatgctggtaactccatcggagggggcagaggggagcccggccccccagggctacctggg
cccccagggccaaagggagaagcaggggttgatggccaggccggccccccaggacggcaa
ggagacaagggggagcctggagcagctggagaccagggaccagccggccccaagggcacc
aagggggaaccagggaaaggagagatggtggactacaacggaaacatcaacgaggctctc
caggagatccgaacgctggccttgatggggccccctggtcttcccggacaaataggccca
cccggagccccaggccagaagggggagattggacttccgggccctccaggacacgacggg
gaaaagggacctcgaggcaagccaggagacatgggccctcccggtccccaaggcccccca
ggaaagtttggacctacaggaatgaagggagaacacggacacccagggagcccaggagag
aagggggagaaaggggagacaggacaggcaggccccccgggtctagacggcccaactggg
gagaaaggagaaccaggtggccaagggagacccggagcaacaggattgcctggccctatc
gggctcccgggatttacaggagagaaaggagagcccggggagaagggggagccaggagtg
gaggttcctgggcctccagggccagaggggccccccggacctccggggctccaaggtgtt
cctggaccaaagggggaagcaggactagatggagcaaagggagagacgggtgtccaggga
gagaaaggagatcgagggccgctgggattacccggagcttcaggtttggacggcaggcct
gggccaccgggtactccaggaccaatcggagtcccaggcccagcgggaccaaaaggcgag
aggggcagcaaaggcgacctgggggtgacgggaccaacaggagcagctggccttcctggt
ttacatggaccacccggagacaaaggaaaccggggggagagggggaagaaaggctctaga
gggtccaaaggggataagggagaccaaggagcgcctggattagatgccccctgcccattg
ggtgaagacggcttaccagtccagggttgctggaacaaggtggatcctgctatccggagc
ctccggatcgtgaccgtagtgcttctgtccccggctctggggaaagcctcatcttag
DBGET
integrated database retrieval system
