Eumetopias jubatus (Steller sea lion): 114216489
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Entry
114216489 CDS
T07240
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
eju
Eumetopias jubatus (Steller sea lion)
Pathway
eju03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eju00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114216489 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eju03041
]
114216489 (PRPF40A)
Spliceosome [BR:
eju03041
]
Complex A
U1 snRNP components
U1 related factors
114216489 (PRPF40A)
Complex B
114216489 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
WW_2
Motif
Other DBs
NCBI-GeneID:
114216489
NCBI-ProteinID:
XP_027968870
LinkDB
All DBs
Position
Unknown
AA seq
1040 aa
AA seq
DB search
MQATPSEAEAGGESLQSCVSAAHSDWTVGKPVSLLAPLIPPRSAGQPLTFGPSGRQPLRS
LLVGMCSGSGRRRSSLSPTMRPGTGAERGGLMVSEMESHPPSRGPGDGERRLSGSSLCSS
SWVSADGFLRRRPSMGHPGMHYAPMGMHPMGQRANMPPVPHGMMPQMMPPMGGPPMGQMP
GMMSSVMPGMMMSHMSQASMQPALPPGVNNMDVAAGTTSGAKSMWTEHKSPDGRTYYYNT
ETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQTKESRWAKPKELEDLEGY
QNTIVAGSLITKSNLHAMIKAEESSKQEECTTTSTAPVPTTEIPTTMSTMAAAEAAAAVV
AAAAAAAAAAAAANASASTSASNTVGGTGPVVPEPEVTSIVATVVDNENTVTISTEEQTQ
LTSTPAVQEQSMEVSSNTGEETAKQETVADFTPKKEEEESQPAKKTYTWNTKEEAKQAFK
ELLKEKRVPSNASWEQAMKMIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYK
EAKESFQRFLENHEKMTSTTRYKKAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKEKE
QAKQLRKRNWEALKNILDNMANVTYSTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICF
EEHIRALEKEEEEEKQKSLLRERRRQRKNRESFQIFLDELHEHGQLHSMSSWMELYPTIS
SDIRFTNMLGQPVFSLGSTALDLFKFYVEDLKARYHDEKKIIKDILKDKGFVVEVNTTFE
DFVAIISSTKRSTTLDAGNIKLAFNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQA
TPPIELDAVWEDIRERFVKEPAFEDITLESERKRIFKDFMHVLEHECQHHHSKNKKHSKK
SKKHHRKRSRSRSGSDSDDDDSHSKKKRQRSESRSASEHSSSAESERSYKKSKKHKKKSK
KRRHKSDSPESDAEREKDKKEKDRESEKDRTRQRSESKHKSPKKKTGKDSGNWDTSGSEL
SEGELEKRRRTLLEQLDDDQ
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgacgccgagtgaggctgaggctgggggcgaatcgctgcagagctgcgtgtcg
gccgcgcactctgattggacagtggggaagcctgtcagcttattggccccgctgatcccg
ccccgtagcgcagggcagcctttaacctttggccccagcgggcgccagccactcagatcg
cttcttgttggtatgtgtagcggcagtggccgccggcggagcagtctgagcccgacgatg
aggccggggacgggagcggagcgtggaggcctcatggtgagtgaaatggagagccatcct
ccttcgcggggtcccggggacggggagcggagattgtccggctcaagcctctgctccagc
tcttgggtctctgctgacggcttcctgaggagacggccctcgatggggcaccctggcatg
cattatgccccaatgggaatgcaccctatgggtcagagagcgaatatgcctcctgtacct
catggaatgatgccgcaaatgatgccccctatgggagggccgccaatgggacaaatgcct
ggaatgatgtcttcagtaatgcctggaatgatgatgtctcatatgtctcaggcttccatg
cagcctgccttaccgccaggagtaaataatatggatgtagcagcaggtacaacatctggt
gcaaaatcaatgtggaccgagcataagtcacctgatggaaggacttactactacaatact
gaaacaaaacagtctacttgggagaaaccagatgatctgaaaacacctgctgagcaactt
ttatctaaatgtccctggaaggaatacaaatctgactctggaaagccttactattataat
tctcaaacaaaagaatcccgctgggccaaacctaaagaacttgaggatcttgaaggatac
cagaataccattgttgctggaagtcttattacaaaatcaaacctgcatgcaatgatcaaa
gctgaagaaagcagtaagcaagaggagtgcaccacaacatcaacagccccggttcctaca
acagaaattccgaccaccatgagcaccatggctgctgcagaagccgctgccgctgttgtt
gccgccgccgccgccgccgctgctgccgccgccgcagccaatgccagtgcttccacctct
gcttcaaacactgtcggtggaactggcccagtcgttcctgagccagaagttacttcgatt
gttgctaccgttgtagataacgagaatacagtgacaatttcaactgaagaacaaacacaa
cttactagtactcctgctgttcaggaacagagtatggaagtatccagtaatactggagaa
gaaacagctaagcaggaaactgtagctgattttactcccaaaaaagaagaggaggaaagc
caaccagcaaagaaaacctatacttggaatacaaaggaagaggcaaagcaagcgtttaaa
gaattattgaaagaaaagcgggtaccatctaatgcttcatgggaacaagctatgaaaatg
atcattaatgatccacgatacagtgctttagcaaagttgagtgaaaaaaagcaagccttt
aatgcttacaaagtccagacagagaaagaagaaaaagaagaagcacgatcaaaatacaaa
gaggctaaggaatcctttcagcgttttcttgaaaatcatgagaaaatgacttccacaacc
agatacaaaaaagcagagcaaatgtttggagagatggaagtctggaatgcaatatcggaa
cgtgatcgtcttgaaatctatgaagatgttttattctttctttcaaaaaaagaaaaggag
caagcaaagcagttacggaagagaaattgggaagccttaaaaaacatacttgacaacatg
gctaatgtaacatactctactacctggtctgaagcccagcagtatctgatggataatcca
acttttgcagaagatgaggaattacagaacatggataaagaagatgcattaatttgcttt
gaagaacacatccgagctttagaaaaggaagaagaagaagaaaaacagaagagtttgctg
agagaaaggagacgacagcgtaaaaatagagaatcttttcagatatttttagatgaactg
cacgaacatggacaactgcattctatgtcatcttggatggaattgtatccaacaattagt
tccgacattagatttactaatatgcttggtcaaccggttttttcattaggatcaactgca
cttgaccttttcaagttttatgttgaggatcttaaagcacgttatcatgatgagaagaaa
ataataaaagacattctaaaggataaaggatttgtagttgaagtaaatacgactttcgaa
gactttgtggccataatcagttcaactaaaaggtcaaccacgttagatgccggaaatatt
aagttggctttcaacagtttactagaaaaggcagaagctcgtgaacgcgaacgagaaaaa
gaggaggctcgaaaaatgaaacgaaaagaatctgcatttaagagtatgttgaaacaagct
actcctccaatagaattggatgctgtctgggaagatatccgggagagatttgtaaaagag
ccagcatttgaggacataactctagagtctgaaagaaaacgaatatttaaagattttatg
catgtgcttgagcatgaatgtcaacatcatcattcaaagaacaagaaacattctaaaaaa
tcgaaaaaacatcacaggaaacgttcccgctctagatcgggatcagattcagatgatgac
gacagccattcaaagaaaaaaagacagcgatcagagtctcggtctgcctcagaacattct
tctagtgctgagtctgagagaagttataagaagtcaaaaaaacataagaagaaaagcaag
aagaggagacataaatctgactctccagagtcagatgctgagcgagagaaggataaaaaa
gaaaaagaccgagaaagtgaaaaagacagaactagacaaagatcagaatcaaaacacaaa
tcacctaagaaaaagactggaaaggattctgggaattgggatacttctggcagtgaactg
agtgaaggggaattggaaaagcgcagaaggacccttttggagcaactggatgatgatcaa
taa
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