Eumetopias jubatus (Steller sea lion): 114217732
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Entry
114217732 CDS
T07240
Symbol
UPF2
Name
(RefSeq) regulator of nonsense transcripts 2 isoform X1
KO
K14327
regulator of nonsense transcripts 2
Organism
eju
Eumetopias jubatus (Steller sea lion)
Pathway
eju03013
Nucleocytoplasmic transport
eju03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
eju00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114217732 (UPF2)
03015 mRNA surveillance pathway
114217732 (UPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eju03019
]
114217732 (UPF2)
Messenger RNA biogenesis [BR:
eju03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
114217732 (UPF2)
mRNA cycle factors
P-body specific factors
114217732 (UPF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
114217732
NCBI-ProteinID:
XP_027970487
LinkDB
All DBs
Position
Unknown
AA seq
1271 aa
AA seq
DB search
MPAERKKPASMEEKETLLNNKEKDCGERRPVSSREKPKDEIKLTAKKEVIKVPEDKKKKL
EEDKRKKEDKERKKKEEEKVKAEEELKKKEEEEKKKHEEEEKKKQEEQAKRQQEEEAAQL
KEKEESLQLHQEAWERHQLRKELRSKNQNAPDSRPEENFFSRLDSSLKKNTAFVKKLKTI
TEQQRDSLSHDFNGLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSLL
QVWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRES
HTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNLSFPPSEIISPEKQQPFQNLLKEYFT
SLTKHLKRDHRELQNTERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLD
ENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAI
LFKDNEKSCQNKDSNKDDSKEMKEPKDNKEVSNPDDLELELENLEINDDTLELEGGDEAE
DLTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANR
KKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIE
TKNKTVRFIGELTKFKMFTKNDTLHCLKILLSDFSHHHIEMACTLLETCGRFLFRSPESH
LRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYK
DLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDV
GIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFGV
NPDGSPSSLDPPEHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLEV
WTKDHPFPIDIDYMISDTLELLRPKIKLCNSLEESLRQVHDLEREFLIKLGLVNDKDSKD
SMTEGENLEEDEEEEEGGAETEEQSGNESEVNEPEEEEGSDNDDDEGEEEEEENTDYLTD
SNKENETDEENTEVMIKGGGLKHVPCVEDEDFIQALDKMMLENLQQRSGESVKVHQLDVA
IPLHLKSQLRKGPPLGGGEGEAESADTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWNQ
QQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPNA
DLIFKTGGRRR
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgagcgtaaaaagccagcaagtatggaagaaaaagaaactttactaaacaac
aaggaaaaagactgtggtgaaaggcggccagtgagcagcagggagaaaccaaaagatgag
atcaagcttactgccaagaaggaggttattaaggtccctgaagataaaaagaagaaactg
gaagaagataagagaaaaaaagaagacaaggaacgaaagaaaaaagaagaagaaaaggtg
aaggcagaggaagaattaaagaaaaaagaggaagaagaaaaaaagaaacatgaagaggaa
gagaaaaagaagcaagaagagcaggcaaaacgtcagcaagaagaagaagctgcccagttg
aaagagaaagaggaatcccttcagcttcatcaggaagcctgggaacgacatcagttaagg
aaggaacttcgtagcaaaaaccaaaatgctccagacagccggccagaggaaaatttcttt
agccgcctagactcaagtttgaagaaaaatactgcttttgtcaagaaactaaaaactatt
acagaacaacagagagactccttgtcccatgattttaatggcctaaatttaagcaaatac
attgcagaagctgtagcttctattgtggaagcaaagctaaaaatatctgatgtgaactgt
gctgtgcacttgtgctctctctttcaccagcgttatgccgactttgctccatcacttctt
caggtttggaaaaaacattttgaagcgaggaaagaagagaaaacccctaacattaccaag
ttaagaactgatttgcgtttcattgcagaattgacaatagttgggattttcactgacaag
gaaggtctttccttaatctatgaacagctaaaaaatattattaatgctgatcgggaatcc
catactcatgtttccgtggtgattagtttctgtcgacattgcggagatgatattgctgga
cttgtgccgcggaaagtgaagagtgctgcagagaagtttaatttgagttttcctcctagt
gagataattagtccagagaaacaacaacctttccagaatcttttaaaagaatactttaca
tctttgaccaaacacctgaaaagggaccacagggagcttcagaatactgagagacaaaac
aggcgtattctccattctaaaggggagctaagtgaagatagacataaacagtatgaggaa
tttgctatgtcatatcagaagctgctggcaaattctcagtccttagcagacctcttggat
gaaaatatgccagatcttcctcaagacaaaccaacaccagaagagcatgggcctggaatt
gatatctttacacctggtaaacctggagaatatgacttggaaggtggtatatgggaagat
gaagatgctcggaatttttatgagaacctcattgatttgaaagcttttgttccagccatc
ttgtttaaagataacgagaaaagttgtcagaataaagattccaacaaagatgattccaaa
gagatgaaagaacctaaggataataaagaggtatcaaatcctgatgatttagaacttgag
ttggagaacctagaaattaatgatgataccttggagttagagggtggagatgaagctgag
gatctcacaaagaaacttctggatgagcaagaacaagaggacgaagaagccagcactgga
tctcatctcaagctcatagtggatgctttcctccagcagttgcccaactgtgtcaaccga
gatctgatagacaaggcagcaatggatttttgcatgaacatgaatacaaaagcgaatagg
aagaagttggtacgggcactctttatagttcccagacaaaggttggatttgctaccattt
tatgcaagattggttgctacattgcatccctgcatgtctgatgtagcagaggatctttgt
tccatgctgaggggggatttcagatttcatgtacgaaaaaaggaccagatcaatattgaa
acaaagaacaaaactgttcgttttattggagaattaactaaatttaagatgttcacaaaa
aatgatacattacattgtttaaagattcttctatcagacttttcccatcaccatattgaa
atggcatgtactctactagaaacatgtggaaggtttcttttcagatcaccagaatcacac
ctgaggaccagtgtacttttggagcaaatgatgagaaagaaacaagcaatgcacctcgat
gcaagatacgttacaatggtggagaatgcatattactactgcaacccacctccagctgaa
aaaacagtgaaaaagaaacgtcctcctctccaggaatatgtccggaaacttttgtacaag
gatctctccaaggttaccactgagaaggttttgagacagatgcgaaagttgccctggcag
gaccaagaagtgaaagactatgttatctgttgtatgataaacatctggaatgtgaaatat
aatagtattcattgtgtagccaacctcttagcaggactggtcctctaccaagaagatgtt
ggaatccatgttgtggatggagttttagaagatattcgattaggaatggaggttaatcaa
cctaaatttaatcagagacgtatcagcagtgccaagttcttaggggaactttataattat
cgaatggtggaatcagctgttatttttagaactctttattcttttacttcatttggtgtt
aacccagatggctctccaagttcactagaccctcctgagcaccttttcagaattagacta
gtgtgcactattttggatacctgtggccaatactttgacagaggttccagtaaacgaaaa
cttgattgcttccttgtatactttcagcgttatgtttggtggaagaaaagtttggaggtt
tggacaaaagaccatccatttcctattgacatagattacatgatcagtgatacactagaa
ctgctaagaccaaagatcaaactctgtaattctctggaagaatctctcaggcaggtacac
gacttggaacgagaattcttaataaaactaggcttagtaaatgacaaagactcaaaagat
tctatgacagaaggagaaaaccttgaagaggatgaagaagaagaagaaggaggagccgaa
acagaagaacaatctggaaatgaaagtgaagtaaatgaaccagaagaagaggagggttct
gataatgatgacgatgaaggtgaggaggaagaggaagagaatactgattaccttacagac
tccaataaagagaacgaaaccgatgaagaaaatactgaggtaatgattaagggaggtgga
cttaagcacgtaccttgtgtggaagatgaggacttcattcaagctctggataaaatgatg
ctggaaaatcttcagcaacgaagtggcgaatctgtcaaagtgcaccagcttgatgttgct
attcccttgcatctcaaaagccagctgaggaaagggcctccactcggtggtggggaggga
gaagcagagtctgcagacacaatgccgtttgtcatgttaacaagaaaaggcaataaacag
cagtttaagatccttaatgtacccatgtcttcccaactcgctgcaaatcactggaaccag
caacaggcagaacaagaagagaggatgagaatgaaaaagctcacattagatatcaatgaa
cggcaagagcaagaagattatcaagaaatgctgcagtctcttgcccagcgcccagctcca
gcaaacaccaatcgggagcggcggcctcgttaccaacatccaaagggagcacctaatgcg
gatctaatctttaagactggtgggaggagacgttga
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