Eumetopias jubatus (Steller sea lion): 114220289
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Entry
114220289 CDS
T07240
Symbol
IGHMBP2
Name
(RefSeq) DNA-binding protein SMUBP-2 isoform X1
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
eju
Eumetopias jubatus (Steller sea lion)
Brite
KEGG Orthology (KO) [BR:
eju00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eju03009
]
114220289 (IGHMBP2)
03012 Translation factors [BR:
eju03012
]
114220289 (IGHMBP2)
Enzymes [BR:
eju01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
114220289 (IGHMBP2)
5.6.2.5 RNA 5'-3' helicase
114220289 (IGHMBP2)
Ribosome biogenesis [BR:
eju03009
]
Eukaryotic type
Other ribosome biogenesis factors
114220289 (IGHMBP2)
Translation factors [BR:
eju03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
114220289 (IGHMBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_30
AAA_19
zf-AN1
Viral_helicase1
ResIII
DEAD
nSTAND3
AAA_16
SLFN-g3_helicase
AAA_22
IstB_IS21
UvrD-helicase
Helicase_RecD
AAA_25
Flavi_DEAD
Zot
AAA
DnaB_C
PhoH
ABC_tran
NPHP3_N
UvrD_C_2
NTPase_1
AAA_33
Motif
Other DBs
NCBI-GeneID:
114220289
NCBI-ProteinID:
XP_027973816
LinkDB
All DBs
Position
Unknown
AA seq
1004 aa
AA seq
DB search
MASATVESFVTRQLDLLELERDAEVEERRSWQENISPKELQSRGVCLLKLQVSSQRTGLY
GRLLVTFEPRRYASAAVLPSNSFTSGDIVGLCDEGSQLATGILTRITQRSVTVAFDESHD
FQLSLDREQAYRLLKLANDVTYKRLKKALITLKKYHSGPAFSLIEVLFGGSAPSPASEIQ
PLPFYNTSLDASQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAVRQGLKVLCCAP
SNIAVDNLVERLAQCKQRILRLGHPARLLESIQQHSLDAVLARSDNAQIVADIRKDIDQA
FAKNRQTQDKREKSSVWSEIKLLRKELEEREEAAMLESLTSAAVVLATNTGASSDGPLKL
LPDGHFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTTVSHKAALAGLSLSLM
ERLVEEHGARVVRTLTVQYRMHQAIMQWASDALYHGQLTAHPSVAGHLLRDLPGVAATEE
TSIPLLLVDTAGCGLFELEEENDQSKGNPGEVRLVSLHIQALVDAGVQASDIAIITPYNL
QVDLLRQSLAHRHPELEIKSVDGFQGREKEAVVLSFVRSNRKGEVGFLAEDRRINVAVTR
ARRHVAVVCDSHTVSSHTFLKTLVDHFAEHGEVRTAFEYLDDIIPENYSHESSQGHGRAG
AKPHGSAALARKPPGGRPREGAQEARAAEGLERRRPGGKPSGPEVPSQPRLNGGSPEGAG
SGDRAEHFRAKIAEFVASEKTQLEFPASLNSHDRMWIHQIAEEHGLRHDSAGEGKNRFIT
VSKRAPPALPALQPPAGAGSQAPVRPTAPGPTQTKPPLGEQSSQDPLNLKALHLERLQRE
KSRRERPAKEGPAKEWPTKEGQQALRSGLRALPEKKKKKEAKGHTAVDLPGEEDFEALVA
AAIKADNACSLAKCTASVVTVGQLCLHCGRRYCLSHHLPEIHGCGERARAHARQRISREG
VLYAGSGTKDRALDPAKRAQLQRRLDKKLDELTSQRKSKRKEKK
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggcgactgtggagagcttcgtgaccaggcagttggacctgctggagctcgag
agagacgcggaggtcgaggagcgcaggtcttggcaggaaaacatctctccgaaagaactg
cagagccgaggcgtgtgtttgctgaagctgcaggtgtccagccagcggaccgggctgtat
gggcggctgctggtcacctttgagcccaggagatatgcatctgccgcggtgcttcccagc
aacagctttacttcaggcgatatagtgggtctgtgtgacgaagggagtcagctggccacg
gggatcctgacccggatcacgcagagatcggtcacggtggcctttgacgagtcccatgac
ttccagctgagcttggaccgggagcaggcctacagactgttaaaacttgccaatgatgtc
acttacaagcgactgaagaaggctctgatcaccctaaagaagtaccattccggccccgcg
ttctcgctcatagaggtcctctttggtggatcagcccccagtcctgccagtgagatacag
ccgctgccattctataacacttccctggatgcctcccagaaggaagcggtctcctttgcg
ctgtcccagaaagagcttgccatcatccatgggcctcctggcactgggaagaccaccacc
gtggttgaaatcattctgcaggctgtgaggcagggcttaaaggttctgtgctgtgctccc
tctaacatcgccgtggataatctggtagagcgtctggctcagtgtaagcagagaatcctg
cgcctcgggcaccccgcccgcctgctggagtccattcagcagcattccctcgacgcagtg
ttagcgcggagtgacaacgcccagattgtcgcagacatcaggaaggacatcgatcaggcc
ttcgcgaagaacaggcagacccaggataagagagagaagagtagtgtttggagtgaaatc
aagctgttgaggaaggagctggaggagagggaagaagctgcgatgctggagagcctcacg
tcagcagccgtggtgctggcgacaaacacaggtgcttcttccgacggccctctgaagctg
ctgcccgatggccacttcgacgtggtggtcatcgacgagtgcgcccaggccctggaagcc
agctgctggatccccctgctgaaggccaggaagtgcatcctggctggagatcacaagcag
ctgccccccaccacggtctctcacaaggctgccctggcggggctgtcgctgagcctgatg
gagcgcctggtggaggagcacggtgcgcgggtggtgcggacgctgacggtgcagtaccgc
atgcaccaggccatcatgcagtgggcctcggacgccctgtaccacgggcagctcacggcc
cacccttctgtggctgggcacctcctgcgggacctcccaggagtggctgccacggaggag
accagcatccccctgctgctcgtggacacggccggctgtgggctgtttgaactggaagag
gagaacgaccagtctaaggggaaccccggtgaagtgcgcctcgtcagtctgcacatccag
gccctggtggacgctggtgtccaagcgagtgacatcgccatcatcacgccatacaacctc
caggtggacctgctcaggcagagccttgcccacaggcaccccgagcttgaaattaagtcc
gtcgatggcttccaaggccgagagaaggaggctgtggtcctgtccttcgtcagatccaat
aggaaaggtgaagtgggcttccttgccgaggaccggcggatcaatgttgctgtcacccgc
gcgcggcgccacgtggcggtcgtgtgtgattctcacaccgttagcagccacaccttcttg
aagaccctggtggatcactttgcggagcacggggaagtgcgcacggcctttgagtatctt
gacgacatcatccctgaaaactactcccacgagagttcccagggccacggccgagctggc
gcgaagccccacggctctgcggcgttggccaggaagcctcctgggggccggccgcgggag
ggggcccaggaggccagagcagctgaggggctggagcggaggaggccgggtgggaagccc
tcaggccctgaggtcccttctcagcccaggctcaacggaggcagcccagagggagccggg
agcggagaccgtgcagaacacttcagagccaagatcgctgagtttgtggcgagtgagaaa
actcagttggagtttcctgcttccctgaactcccacgacaggatgtggatccaccagata
gccgaagagcacgggctgaggcatgacagcgccggggaagggaagaacaggttcatcact
gtgagcaagagagccccgcccgccctgccagccctgcagcctccagcaggggccggcagc
caagcccctgtcaggcccacggcccccggccccacacagaccaagccccctcttggggag
cagagcagtcaggaccccctgaatctgaaggccctgcacctggaaaggctgcagagggag
aagagcaggcgggagcggccagccaaggaggggccggccaaggagtggccaaccaaggag
gggcagcaggccttgcggtccgggctgcgcgcgttaccagagaagaagaagaagaaagaa
gcaaaaggacacacggctgtagatttgcccggtgaggaggacttcgaggccctggtcgcg
gccgccatcaaggctgataacgcgtgcagcctcgctaagtgcacggccagcgtcgtgacc
gtgggccagctctgtctgcactgcggccgccgctactgcctcagccaccacctgcccgag
atccatggctgtggggagagggctcgtgcccacgcccggcagagaatcagccgggaagga
gtcctctacgccggcagtgggaccaaggacagggccctggacccagccaagagggcccag
ctccagaggaggctggataagaagctggatgagctgaccagccagaggaagagtaaacgg
aaggagaagaagtga
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