Eumetopias jubatus (Steller sea lion): 114222130
Help
Entry
114222130 CDS
T07240
Symbol
SKIV2L
Name
(RefSeq) helicase SKI2W
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
eju
Eumetopias jubatus (Steller sea lion)
Pathway
eju03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eju00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114222130 (SKIV2L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eju03019
]
114222130 (SKIV2L)
Enzymes [BR:
eju01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
114222130 (SKIV2L)
Messenger RNA biogenesis [BR:
eju03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
114222130 (SKIV2L)
mRNA degradation factors
3'-5' decay
Ski complex
114222130 (SKIV2L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
Ski2_N
MTR4_beta-barrel
DEAD
MTR4-like_stalk
DEXQc_Suv3
Helicase_C
ResIII
DUF3516
Motif
Other DBs
NCBI-GeneID:
114222130
NCBI-ProteinID:
XP_027976298
LinkDB
All DBs
Position
Unknown
AA seq
1246 aa
AA seq
DB search
MMETERLVLPLPDPLDLPLRPVELGCTGRWELLNVPGAPESTLPHGLPPCAPDLQQEAEQ
LFLSSPAWLPLHGVEHSARKWQRKMDPWSLLATQGAPVPSDLQAQRHPTTGQILGYKEVL
LENTNLSATTSLSLRRPPGPISQSLWGNPTQYPFWPGGMDEPTIIDLSTREEAEEEIDFE
QDLLTVPPGFKKGVDFAPKDHSAPAPSLLSLSRLLEPLDLGGGDEDESEAVGQPGIPRGD
AVSASPCSASLARASSLEDLVLKEASTAVSPPEPPKPLPQEQWAIPVDVTSPVGDFYRLI
PQPAFQWSFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTS
PIKALSNQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWV
IFDEVHYINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVIST
VARPVPLEHYLFTGNSPKTQGELFLLLDSRGAFHTKGYYAAVEAKKERMSKHAQTFGAKQ
PTHQGGPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEI
HLFLQRCLARLRGSDRQLPQVLHMSELLHRGLGVHHSGILPILKEIVEMLFSRGLVKVLF
ATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCK
GRVPEMADLHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSRKDSK
AHEQALAELTKRLGALEKPDTTGQLVDLPGYYSWGEELTETRSLIQRRIMESVNGLKSLS
TGRVVVVKNQEYHNTLGVILQVSSNSTNRVFTTLVLCDKPVCEDPQERAPTTPDVPYPDD
LVGFKLFLPEGPCDHTVAKLQPGDVAAITTKVLRVNGEKILEDFSKRLQPKFKKDPPIAA
VTTAVQELLRLAQAYPAGPPTLDPVNDLQLKDVSVVEGGLRARKLEELIWGAQCVHSPRF
SAQYLKLQEQMRIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRV
ACAMSSHELLLTELMFDNALSALRPEEIAALLSGLVCQSPGDPGEQLPSTLKQGVERVRA
VAKRIGEVQVACGLNQTVEEFVGELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCI
QRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLYTQ
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgatggagacggagcgactcgtgctgcctcttccagatcccctggatctgccccttcgg
ccggtggagctgggatgcacagggcgctgggagttgctgaatgtgcctggggctccagag
agcacccttccccacggcctccctccctgtgccccagatctgcagcaggaagcagagcag
ttgttcttgtcatctccagcctggttgcctctgcatggtgtggagcactctgcccgaaaa
tggcagaggaaaatggatccctggtctctcctggccacacagggggccccagtgccctcc
gaccttcaggcccaaagacacccaaccacggggcagattctgggctacaaagaggtcctg
ctggagaatacaaacctatcggctaccacctccttgtctcttcgccggcccccagggccc
atctcccagtccctgtgggggaatccaacacagtaccctttctggccaggtggaatggat
gagcccaccataatagatctgagcactcgggaggaggctgaggaggagatagactttgag
caagatcttcttactgttccacctggcttcaagaaaggtgtggactttgcaccaaaggat
cactcagctccagctcccagcttgctgagcctcagccgtttgctggagcctctggatttg
ggtgggggagatgaggatgagagtgaggcagtgggacagccaggaattccccgaggggac
gctgtttctgcctccccctgcagtgcttccctggcccgagcaagcagcttggaggaccta
gtgttgaaggaagcatctacagctgtatcccctccagagccccccaaacccctgcctcag
gagcagtgggcgattcctgtggatgtcacctcccctgttggtgatttctaccgcctcatt
ccccagccggccttccagtggtcatttgagccagatgtgttccagaagcaggccatcctg
cacttggagcggcatgactctgtcttcgttgcagctcatacatctgcggggaagacggtt
gtggctgaatacgccattgcccttgcccagaaacacatgacgcgcaccatttacacgtcg
cccatcaaggccctgagcaaccagaagttccgagactttcgaaacacattcggggatgtg
ggattgctcactggggatgtacagctgcacccagaggcctcctgcctcattatgaccaca
gagatccttcgctccatgctgtacagtggctcagatgtcatccgggacctggagtgggtc
atctttgatgaggttcactacatcaacgatgctgagcgtggggttgtgtgggaggaggtg
ctcatcatgctccctgaccacgtctccatcatccttctgagtgctaccgtccccaacgcc
ctcgagttcgccgactggatcgggcgactgaaacgtcgccagatctatgtgatcagcact
gttgcgcgccctgttcccttagagcattatctcttcacggggaacagccccaagacccag
ggggagctctttctgttgctggattcccgaggtgctttccacacaaaggggtactatgca
gctgtggaggccaagaaggagcggatgagcaaacatgcccagacctttggggccaaacag
cccacgcatcagggggggcctgcacaggatcgcggtgtgtacctgtccctcctggcctcc
ctccgcacccgtgcacagctgcccgtggtggtgttcaccttctcccggggtcgctgtgat
gagcaagcctcgggcctcacctcccttgacctcaccacaagttcagagaagagtgagatt
cacctcttcctacagcgctgccttgcccgcctccgtggctctgaccgccagctgccccag
gtcctacacatgtccgagcttctgcaccgtggcctgggtgtgcaccacagtggcatcctg
cctattcttaaagagatcgtggagatgctcttcagtcgaggcctggtcaaggtcttgttt
gccacagagacctttgccatgggtgtaaacatgcctgcccgaacggtggtgtttgactcc
atgcggaagcacgatggctccaccttccgggacctgctccctggagagtacgtgcagatg
gcaggccgagcaggccggaggggcctggaccccacaggcactgtcatcctgctctgcaag
ggccgtgtgcctgagatggcagacctgcaccgcatgatgatggggaagccgtcacagctg
cagtcccagttccgactcacgtacaccatgatcctgaacctgctgcgggtggatgccctt
agggtggaggacatgatgaagaggagcttctccgagtttccatcccgcaaggacagcaag
gcccatgaacaggctttagctgaactgaccaagagactgggggccttggagaaacctgac
acgactggccaattggttgacctgcctgggtattacagctggggggaggaactgacagag
acccggagcctgatccagcgacgcatcatggagtctgtgaatgggctcaagtctctttca
acgggaagggtagtggttgtgaagaatcaggagtatcacaacacattgggtgtgatcctg
caggtctcctcaaactccaccaacagggtatttaccaccctggtcttgtgtgataagcct
gtgtgtgaggacccacaggagagggcaccaaccaccccagatgtgccctaccccgatgat
cttgtgggattcaagctgttcctgcctgaagggccctgtgaccacacagtggccaagctc
cagccaggagatgtggccgccatcaccaccaaggtgctccgggtgaatggggagaagatc
ttggaggacttcagcaagaggctgcaaccgaaattcaagaaggatcctcccattgcagcc
gtgaccactgctgtgcaggaactgctgcgtctggctcaggcctacccagcgggaccccct
acccttgaccctgtcaatgacctgcagctcaaggatgtgtcagtggtggagggggggctc
cgggcccgcaagctggaggagctgatctggggggctcagtgtgtgcacagcccccgcttc
tctgcccagtacctgaaactgcaggagcaaatgcggatacagaaggagatggagcgacta
cgcttcctgctgtcggatcagtcactgctgctgctgccagagtatcaccagcgagtagag
gtgctccgaaccctgggttatgtagacgaggcaggcaccgtgaagctggcggggcgggtg
gcttgtgccatgagcagccatgagctcctcctcactgagctcatgtttgacaacgctctg
agtgccctgcggccagaggagattgcggccctgctctccggcctggtctgccagagccct
ggggaccctggggagcagctcccaagcaccctcaaacagggagtggaacgtgtccgggct
gtagccaagcggattggtgaggtccaggtggcctgtggcctgaaccagacagtggaggaa
tttgtgggggagctgaattttgggctggtcgaggttgtatacgagtgggcccggggcatg
cccttctccgagctggcggggctgtcggggacccctgagggcctggtggtccgctgcatc
cagcgcctggccgagatgtgtcgctcgctgaggggggcagcccgcctcgtaggtgagcct
gtgctaggtgccaagatggagacggcggctaccctgctacggagggacatcgtctttgcg
gccagcctgtacactcagtga
DBGET
integrated database retrieval system
