Eumetopias jubatus (Steller sea lion): 114225856
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Entry
114225856 CDS
T07240
Symbol
PRPF40B
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B
KO
K12821
pre-mRNA-processing factor 40
Organism
eju
Eumetopias jubatus (Steller sea lion)
Pathway
eju03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eju00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114225856 (PRPF40B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eju03041
]
114225856 (PRPF40B)
Spliceosome [BR:
eju03041
]
Complex A
U1 snRNP components
U1 related factors
114225856 (PRPF40B)
Complex B
114225856 (PRPF40B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
DUF4936
RhoGAP-FF1
WW_2
Motif
Other DBs
NCBI-GeneID:
114225856
NCBI-ProteinID:
XP_027981483
LinkDB
All DBs
Position
Unknown
AA seq
866 aa
AA seq
DB search
MMPPPGIPPPFPPMGLPPMSQRPPAIPPMPPGIMPPMLPPMGAPPPLTQIPGMVPPMLPG
MLMPAVPVTAATAPGADTASSAVAGTGPPRALWSEHVAPDGRIYYYNADDKQSVWEKPSV
LKSKAELLLSQCPWKEYKSDTGKPYYYNNQSKESRWTRPKDLDDLEALVKQEAAGKQPQP
QILQPQPPQPQPEPPPGPPGPTPMPLGLLEPEPGGSEDCDTSEAAQPVEQGFLQQPEEGP
SSAAGQHQPPQQEEEESKPEPERSGLSWSNREKAKQAFKELLRDKAVPSNASWEQAMKMV
VTDPRYSALPKLSEKKQAFNAYKAQREKEEKEEARLRAKEAKQTLQHFLEQHERMTSTTR
YRRAEQTFGELEVWAVVPERDRKEVYDDVLFFLAKKEKEQAKQLRRRNIQALKSILDGMS
SVNFQTTWSQAQQYLMDNPSFAQDHQLQNMDKEDALICFEEHIRALEREEEEERERARLR
ERRQQRKNREAFQTFLDELHETGQLHSMSTWMELYPAVSTDVRFANMLGQPGSTPLDLFK
FYVEELKARFHDEKKIIKDILKDRGFCVEVNTAFEDFAHVISFDKRAAALDAGNIKLTFN
SLLEKAEAREREREKEEARRMRRREAAFRSMLRQAVPALELGTAWEEVRERFVCDSAFEQ
ITLESERIRLFREFLQVLETECQHLHTKGRKHGRKGKKHHRKRSHSPSGSESEEEELPPP
PLRPPKRRRRNPSESGSEPSSSLDSVESGGAALGGRGSPSSRLLLGSDHGLRKAKKPKKK
TKKRRHKSNSPESETDPEEKAGKESDEKEPEQDKDRELRRAELLNRSPGFGIKKEKTGWD
TSESELSEGELERRRRTLLQQLDDHQ
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgatgccccctccaggaatccccccaccctttcctccgatgggactaccccccatgagt
cagagaccaccagccatccccccgatgccacctggcatcatgcccccaatgctgccacca
atgggggcgccaccgccactcacgcagataccaggaatggtaccgcccatgctgccaggg
atgctgatgccagcggtgcctgtcaccgcagcgacggctccgggtgcggacacagccagc
tctgctgtggctgggacaggccctccgagggccctgtggagtgagcatgtggcccctgac
gggcgcatctactactacaatgcagacgacaagcagtccgtgtgggagaagcccagcgtg
ctcaagtccaaggcagagttgctgctgtcccagtgtccctggaaagagtacaagtccgac
acgggcaaaccttactactataacaaccagagtaaggagtctcgctggacccggcccaag
gacctggatgacctggaggctctagtcaaacaagaggctgcagggaagcagccccagccc
cagatactgcagccgcagccacctcagccccagcctgagcccccgcccgggccgcctggc
cccacccccatgcccctgggccttctagagcctgagccaggtgggagtgaagattgcgat
acgtcagaggctgcccagcctgtggagcaggggtttctgcagcagccggaggagggcccc
agcagtgctgctggacagcatcagccaccacagcaggaggaagaggaatcaaagccagaa
ccagagaggtctggcctcagttggagcaaccgggagaaggcaaagcaggccttcaaggag
ctgctgagggacaaggctgtcccctccaatgcctcgtgggaacaggccatgaagatggtg
gtcaccgacccccgttacagtgccttgcccaagctgagtgagaaaaagcaggcattcaat
gcctacaaggcgcagcgggagaaggaggagaaggaggaggcccggctaagggccaaggag
gccaagcagaccttgcagcatttcctggagcagcacgaacgcatgacctctaccacccgc
taccggcgggccgaacagacctttggggagctggaggtgtgggctgtggtccctgagagg
gatcgaaaagaggtttatgatgatgtcctcttcttcctggccaagaaggagaaggaacag
gccaagcagctccggcgccgcaacatccaggccctgaagagtatcctggatgggatgagt
agtgtcaacttccaaactacatggtcccaggctcagcagtacctcatggataaccccagc
tttgctcaggaccaccagctgcagaatatggacaaggaagatgcactgatctgcttcgag
gagcatatccgagctttggagagggaggaggaggaggagcgggagcgggcccgccttcgg
gagcggcgtcagcaacgcaagaaccgggaggccttccagaccttcctggacgagctgcac
gagacagggcagctgcactctatgtccacctggatggagctgtacccagcggtcagcact
gatgtccgctttgccaacatgctgggccagccgggctccacccctctggacttgttcaag
ttctatgtggaggagttgaaggcacgattccatgatgagaagaagatcattaaggacatc
cttaaggaccggggcttctgcgtggaggtgaacacagcctttgaggacttcgcccacgtc
ataagctttgacaagagggcggctgcgctggacgcaggcaacatcaagctgaccttcaat
agtttgctggagaaagcagaggcgcgggagcgagagcgggagaaggaggaggcgcgaagg
atgcggcgcagggaagctgccttccgaagcatgctgaggcaggccgtgcctgccctggag
ctgggcactgcctgggaagaggtccgtgagcgctttgtgtgcgactcagcctttgagcag
atcaccctggagtcggagcggatccggctcttccgggagttcctgcaggtactggagact
gaatgccagcacctccacaccaaaggccgaaaacacggcagaaagggcaagaagcaccat
cgaaagcgttcccactcgccctcaggctctgagtcggaagaagaggagctgcccccgccg
cctctccgaccccccaagcggagaaggcggaacccctcggagtcaggctctgagccctct
tcctcccttgattcggttgaaagtgggggtgctgcccttggaggacggggctccccatct
tctcgccttctccttggatcagatcatggccttcggaaagccaagaaaccaaaaaagaaa
actaagaagagaagacacaagtcgaacagtcctgagagcgagacagaccctgaggagaaa
gctggcaaggagagtgatgagaaagagccagaacaggacaaggacagggagctccggcgg
gcagaactcctgaaccgctccccaggttttggaatcaagaaggagaagacgggctgggac
acgtcggaaagtgagctgagcgagggtgagctggaaaggcggcggcggacgctcctgcag
cagctggacgaccaccagtga
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