Eumetopias jubatus (Steller sea lion): 114226375
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Entry
114226375 CDS
T07240
Symbol
COL18A1
Name
(RefSeq) collagen alpha-1(XVIII) chain isoform X1
KO
K06823
collagen type XVIII alpha
Organism
eju
Eumetopias jubatus (Steller sea lion)
Pathway
eju04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
eju00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
114226375 (COL18A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
eju04147
]
114226375 (COL18A1)
00535 Proteoglycans [BR:
eju00535
]
114226375 (COL18A1)
00536 Glycosaminoglycan binding proteins [BR:
eju00536
]
114226375 (COL18A1)
Exosome [BR:
eju04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
114226375 (COL18A1)
Proteoglycans [BR:
eju00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
114226375 (COL18A1)
Glycosaminoglycan binding proteins [BR:
eju00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
114226375 (COL18A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
DUF959
Collagen_trimer
Fz
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
114226375
NCBI-ProteinID:
XP_027982238
LinkDB
All DBs
Position
Unknown
AA seq
1725 aa
AA seq
DB search
MARLPGSRLGPPLLLLLVTYCLTAARADLLSLNWLWSTRTDGPTAELVSEPPGSPHGQPR
EDTGTRAAPQHAPTEQGRAPASSELPVERPEPGPGGTSPAGPDTKEENIAGVGAKILNVA
QGIRSFVQLWDDATPTTSPPGAEAPAPVTPTPPLTLPGPSSAPQENGTALWLGSGAPSSP
DTQRTEAGTLPVPTQLPPFLGGRSPPPPAAGRASPSSAPGGAPPWGSRQSPGRPQDRDSG
GLLRMAARPGQQHRPPGIRRRTPPLLPLVTGPLGALTGPSARSSDPPTLVSQIPLSAGPG
DGGARAPHVANSVGPGLANRSALLGADPLTPAGQPVPAAGGRCLPLPPSLPVCSHLGIGR
AWLPNHLRHGSSEEVRAAARAWGHLLQTHCHRFLAWFFCLLLAPPCGAGPPPAPPPCRQF
CEALEDACWGHLDGGGLPVSCASLPAQEDGLCVFIGPGAESLGTEVGLLQLLGEPPPPQV
TQVEDPDVGPAFVFGLDANSGQVARYHFPSPFFRDFSLHFHVRPATEDAGVLFAITDAAQ
AVVSVGVRLSGVRDGHQHIQLLYTEPGATRTHTAASFRLPAFTGQWTRFALSVDGATVAL
FVDCELFQRVPLVRSPRGLELEPGAGLFVAQAGGADPDKFQGMIAELRVRGDPHVSPLHC
LEEDDEGGGRVSGDFGSGLEETREPLREQSGPSPKPSLPEAPPVTSPPLAAGRDVEDSRT
EEIEEETTVSSLGARILPGLEAVTTGSVWSPGGGLEEGPAVQSPHAWPVPGPQGPPGPLG
PPGKDGAPGRDGEPGDPGEDGRPGDPGPQGFPGTPGDAGPKGEKGDPGVGPRGPPGPQGP
PGPPGPSFRRDKLTFIDMEGSGFGGDLESLRGPRGFPGPPGPPGVPGLPGEPGRFGMNSS
DVPGPAGLPGVPGRDGAPGLPGTPGPPGPPGKEGGPGKMGQKGSPGEVGAPGPKGSKGDP
GPVGAPGENGLAGAPGPAGPPGPPGPPGPPGPELAAGFDDMEGSGGPFWSTAQGASGSQG
PPGPPGIKGDPGITGPPGAKGEVGAEGPPGFPGLPGREGSAGAQGPKGEKGTQGEKGDPG
RDGVGQPGLPGPPGPPGPVVYMSEQDKVLGGVPGPEGRPGFAGFPGPAGPKGDLGSKGQR
GLPGPKGEKGEPGPLFSPDGSMLAPAQKGAKGEPGFRGPPGPYGRPGHKGEIGFPGRPGR
PGMNGLKGEKGEPGHSSIGFGMRGPPGPPGPPGPPGPPGTPIYDSNAFMESGRPGPPGLP
GLQGPSGPKGDKGDVGPPGPPGQFPFDLLQLGTEMKGEKGDRGGTGQKGEQGAPGGGGFF
GSSVPGPPGPPGPPGYPGIPGPKGESIRGQPGPPGPQGPPGIGHEGRQGPPGPPGPPGAP
GPPSFPGPYRQTISVPGPPGPPGPPGPPGTMGTSSGQVRIWATYPTMLDKVPEVPEGWLI
FVAEREELYVRVRDGLRKVLLGPRTPLPRGTDNEVAALQPPVGNPYPRRELTHSTARPWR
ADDILASPPRLPDPQPYPGAPQHGSYLHFQPARPTGGPTHTHTHQDYHPVLHLVALNSPQ
PGGMRGIRGADFQCFQQARAVGLAGTFRAFLSSRLQDLYSVVRRADRTSVPIVNLRDEVL
FPSWEALFSGSEGRLKPGARIFSFDGRDVLQHPAWPQKSVWHGSDPSGRRLTDSYCETWR
TEAAAATGQASSLLAGRLLAQKATGCHNTLIVLCIENSFMTSFSK
NT seq
5178 nt
NT seq
+upstream
nt +downstream
nt
atggctcggctccccggcagccgcctgggccccccgctgctgcttctcttggtcacatat
tgcctcacggccgcccgcgctgacctgctgagcctgaactggctgtggtccactaggacc
gacgggcccacagccgaactggtctctgagcccccggggagcccacatgggcagcccaga
gaggacaccggcacacgcgcggccccccagcatgcccccacggagcaggggagagcccct
gccagctcggagctccccgtggagaggccggagcctggcccgggcggcacctcccccgcg
ggccccgacacgaaggaggagaacatcgccggcgtgggagccaagatcctgaatgtggct
cagggcatccggagctttgtccagctgtgggatgacgccactcccaccacaagccccccc
ggggcagaggcgccagcccctgtgacccccacgccccccctcaccctccccgggccctcc
agcgccccccaggagaacgggaccgccctctggttgggcagcggggccccgagctctccg
gacacccagaggaccgaggccggcaccctgccagtgcccacccagctgcctcccttcctg
ggcgggcgctcgccaccaccacctgctgcaggtagagcttctccgtcctctgcgccaggc
ggggcccctccctgggggagccggcagtccccggggcggccccaggatcgggacagcgga
ggacttctgcgcatggcagcccgtcccggccagcagcaccgaccccctggcatccgcaga
cgcacgcctcctctgctccccctggtgacgggacccctgggcgctctcaccggcccctcg
gctcgctcctccgacccccccacgctggtgtctcagatcccgctctcagctggccctggg
gacgggggcgctcgggctcctcacgtggctaactctgtggggcctggtcttgctaatcgc
tctgcactgctcggggcggacccgctgacccccgccgggcagcctgtccctgccgccggc
ggccgctgcctgcccctgcctccctccctgcccgtctgcagccacctgggcattgggcgc
gcctggctgcccaaccacctgcggcacgggagcagcgaggaggtgcgggccgccgcccgg
gcatgggggcacctcctccagacgcactgtcaccgcttcctcgcctggttcttctgcctg
ctgctggccccgccctgtggcgctggccctccgcccgcgcccccgccctgccgccagttc
tgtgaggccctggaggacgcgtgctggggccacctggacgggggcgggctgccggtctcc
tgtgcctcgctcccggcccaggaggacggcctctgcgtgttcattgggccgggtgcagaa
agcctgggcacggaggtggggctcctgcagctgcttggagagcccccacccccgcaggtc
acgcaggtggaagaccccgacgtcgggccggccttcgtctttggcctggatgccaacagc
ggccaggtggcccggtaccacttccccagcccgttcttccgtgacttctcactgcacttc
cacgtccggcctgccaccgaggatgcgggggtgctgtttgccatcacggacgcggcccag
gcggtggtgtccgtgggcgtgaggctgtcgggcgtgcgtgatgggcaccagcacatccag
ctgctgtacaccgagcccggggccacgcggacccacacagccgccagcttccgtctgccc
gccttcaccggccagtggacgcgcttcgccctcagtgtggatggcgcgaccgtggcgctg
tttgtggactgcgagttgttccagagggtgcccttggtgcgctccccgcggggcctggag
ctggagcccggcgctggcctcttcgtggcccaggctggaggagcagatcctgacaagttc
caggggatgatcgcggagctgagggtgcgcggggacccccacgtgagccccctgcactgt
ctggaggaggacgatgagggcggcggcagggtgtctggagacttcgggagcgggctggag
gagacccgggagcctctcagggagcagtcgggtccgtcgcccaaacccagcctccccgag
gctcccccggtcacttctccgcccttggctgcaggcagagatgtggaagactccagaact
gaagaaatcgaggaagaaaccacggtgtcttccttgggagctcggatcctccccggcttg
gaagcggtcaccacagggagcgtttggagccctgggggaggcctggaagagggtcctgca
gtgcagagtccccatgcatggcctgtacccgggccgcagggcccccctggccccctgggg
cctccggggaaggatggtgcccccggaagggacggtgagccgggggatcccggtgaagat
gggagaccgggcgaccctgggccgcagggcttccctggaaccccgggagacgcgggcccc
aagggcgagaagggggaccctggggttgggccaagaggacccccggggccccaagggcct
ccagggccgccaggaccctccttcagacgtgacaagctgaccttcattgacatggagggg
tctgggttcggcggtgacctggagagcctccgaggccccagaggcttccctggcccccca
ggacccccgggcgtcccaggcctgcctggagaaccaggccgctttgggatgaacagctca
gacgtcccaggacccgcaggccttcctggtgtgcccgggcgggacggggcccctgggctt
cctggcaccccgggtccaccaggtcctccaggaaaagaaggaggaccagggaagatgggc
cagaaaggcagccccggtgaagtgggcgccccaggacctaagggaagcaagggtgaccct
gggcctgttggcgctcctggggagaatggcttggcaggagcccccggaccagccggacca
ccagggcccccaggaccccctgggccaccaggaccagaactcgccgcagggtttgatgac
atggaaggctctgggggacccttctggtcgacggctcaaggagccagcgggtcgcaggga
ccgcccggcccgcccggaatcaagggggatcctggaataaccggaccaccgggcgccaag
ggagaagtcggggccgaaggacctcccgggttccccggcctccctggcagagagggctcg
gccggagcccagggacccaaaggagaaaaagggacccagggagagaaaggcgacccaggg
agggatggagtggggcagcctggcctccccggaccccccggacccccggggcctgtcgtc
tacatgtcggagcaggataaagtgctgggaggcgtgccgggacctgagggcaggccgggg
ttcgcgggctttcctggaccggccgggccaaagggagatctgggctccaaaggccagagg
ggcctcccgggacccaagggtgagaagggtgagccgggcccgctcttcagccccgatggc
agcatgctggcccccgcccagaaaggggccaagggagagcctggcttccgaggacccccg
ggcccctacggacggccggggcacaagggagagattggcttccctgggcgcccgggtcgc
ccggggatgaacggattgaagggggagaaaggggagccaggacacagcagcatcggcttt
ggcatgaggggtccacccggtcccccagggcctccggggcccccaggccctcccgggact
cccatctatgacagtaacgcctttatggagtctggccgccctggacccccaggattacca
gggctccaggggccttctggacccaagggtgacaaaggagatgtgggccctccaggacca
ccagggcagttcccattcgacctcctccagctggggactgaaatgaagggggagaagggt
gaccgagggggcaccgggcagaaaggagaacagggtgcgcctgggggcggcggattcttc
ggctcaagtgtgcccggcccccccggcccccccggcccgccaggctaccccgggattccg
ggtcccaagggagagagcattcggggccagcccggcccacctggacctcagggaccccct
ggcatcggccatgaggggcgtcagggacctcctgggccccctggaccccctggtgcccca
ggacccccttcctttccgggcccttacaggcaaaccatcagtgttcctggccccccaggc
ccacctgggccccctgggccccctggaaccatgggcacctcctctgggcaggtgaggatc
tgggccacgtatccgaccatgctggacaaggtgccggaggtgccggagggctggctcatc
ttcgtggctgagagggaggagctgtatgtccgggtccgcgacgggctccggaaggtcctg
ctggggccgcggacgccgctcccacgcgggacggacaacgaggtggccgccttgcagccc
cccgtgggcaacccgtacccccggcgggagctcacccactccacggcgcggccctggcgg
gcagatgacatcctggccagccccccacgtctgccggacccccagccctaccctggagcc
ccacagcacggctcctacctgcacttccagccagctcgccccactggcgggcccacccac
acccacacccaccaggactaccacccagtgctgcacctggtggcactgaacagcccccag
ccgggcggtatgcgaggcatccgcggggcggacttccagtgcttccagcaggcgcgcgcc
gtggggctggccggcaccttccgcgccttcctgtcttcgcggctgcaggacctctacagc
gtcgtgcgccgggccgaccgcacaagcgtgcccatcgttaacctcagggacgaggtgctg
ttccccagctgggaggccttattctcaggctccgagggccggctgaagcccggggcccgc
atcttctctttcgatggcagagatgtcctgcagcaccccgcctggccccagaagagcgtg
tggcacggctcagaccccagcggacgccggctgaccgacagctactgcgagacgtggcgg
acagaggctgcagcagccacgggccaggcgtcctcgctgctggctggccggctgctggcg
cagaaagccacgggctgccacaacaccctcattgtgctctgcatcgagaacagcttcatg
acctccttctccaagtag
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