Eumetopias jubatus (Steller sea lion): 114226476
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Entry
114226476 CDS
T07240
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
eju
Eumetopias jubatus (Steller sea lion)
Pathway
eju03030
DNA replication
eju03410
Base excision repair
eju03420
Nucleotide excision repair
eju03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eju00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
114226476 (RFC1)
03410 Base excision repair
114226476 (RFC1)
03420 Nucleotide excision repair
114226476 (RFC1)
03430 Mismatch repair
114226476 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eju03032
]
114226476 (RFC1)
03400 DNA repair and recombination proteins [BR:
eju03400
]
114226476 (RFC1)
DNA replication proteins [BR:
eju03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
114226476 (RFC1)
DNA repair and recombination proteins [BR:
eju03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
114226476 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_22
PTCB-BRCT
BRCT_2
Rad17
RuvB_N
AAA_17
AAA_30
AAA_14
AAA_33
AAA_5
AAA_16
AAA_18
AAA_19
nSTAND3
Zeta_toxin
RNA_helicase
AAA_7
SKI
NTPase_1
NPHP3_N
TIP49
Motif
Other DBs
NCBI-GeneID:
114226476
NCBI-ProteinID:
XP_027982396
LinkDB
All DBs
Position
Unknown
AA seq
1177 aa
AA seq
DB search
MKNHLVILKVKLRCETFISSRSNKDIRKFFGVIPSGKKPVSETVKKNEKTKSAEETLKAK
KGIKEIKVNSSCKEDDSKQKQPNKKKRIIYDSDSESEETVQVKNAKKQPEKLPLSSKPGK
ILRQDPVTYISETDEEDDFMCKKAASKSKENGGSTNSYLGASNMKKNEENTKTKNKPLSP
IKLTPTSVLDYFGTGSVQRSDKKMVASKRKEPSQNADDSTLNDEVIAKQLQLNEDAELER
QLHEDEEFARTLAMLDEEPKTKKARKDPGEREAFSSVQAILSKAEKHKSPHKVKTEQFSD
DRKNCSPKKQTKCESLIGSQQHLKSFPHKIGETSPKASSKVALLKKKGESSYKETEPMAS
KRKGNAVELKGQTKTPKKPKSSPAKKESVSPEDSEKRRTNYQAYRSYLNREGPKALGSKE
IPKGAENCLEGLTFVITGVLESIERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSK
SDKAAALGTNIIDEDGLLNLIRTMPGKKSKYEIAVEAEMKKEKSKLERTPQKKDQGKRKI
SPTKKESESKKSRLTPKKDSFIMSVKKETSVFWRCLDFEEQVAEETNGDSRARNLADDSS
ESKVENLLWVDKYKPTSLKTIIGQQGDQSCANKLLRWLQNWHKSPSEDKKHAAKFGKFAG
KDDGSSFKAALLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKNSLKEVVAESLNNT
SITGFYSTSQHGSGGAAHSVSTKHALIMDEVDGMAGNEDRGGIQELIGLIKHTKIPIICM
CNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGAMMSIAFKEGLKIPPPAMNEIILGANQDI
RQVLHNLSMWCARSKALTYDQAKADSHRAKKDIRLGPFDVARKVFAAGEETAHMSLVDKS
DLFFHDYSIAPLFVQENYIHVKPVAAGGDMKKHLMLLSRAADSICDGDLVDRQIRSKQNW
SLLPTQAIYASVLPGELMRGYMTQFPAFPSWLGKHSSTGKHDRIVQDLALHMSLRTYSSK
RTVNMDYLSHIRDALVQPLTSQGVEGVQDVIALMDTYYLMKEDFENIMEISSWGGKSSPF
SKLDPKVKAAFTRTYNKEAHLTPYSLQAVKIPRHSTGPALDSEYSEELNEDDSQSDEKDQ
DSVETDAMIKKKTKSSKPSKSEKDKESRKGKGKSSKK
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatcatttggtaattttaaaagtgaaactccgatgtgaaactttcatttcctcc
agaagcaataaagatattcggaaattctttggggttataccaagtggaaagaaacctgta
agtgaaacagtaaagaagaatgagaaaacaaagtccgctgaagaaactttaaaagcaaag
aaaggaataaaggaaatcaaggtaaatagttcttgtaaagaagatgactctaaacagaag
caaccaaacaagaaaaagaggatcatctatgattcagattcagaatcagaggagacagtg
caggtaaaaaatgccaaaaagcaaccagagaaattgccattgtcttctaaacctggtaaa
attctacgccaggatcctgttacatacatttcagaaacagatgaagaagatgacttcatg
tgtaagaaggcagcctctaaatcaaaagagaatggaggatctacaaatagttatcttgga
gcatcaaacatgaaaaagaatgaagaaaacactaagaccaagaataaacctttatcacca
ataaaacttacccccacgtcagtgcttgattattttggaaccggaagtgtccaaagatca
gataagaagatggtagcaagcaaaagaaaagagccttcacaaaatgcagatgattccaca
ttaaatgatgaagtcatcgccaagcaattgcaacttaatgaggatgcagagctggagaga
caactacatgaagatgaagagtttgccagaacgttagccatgttggatgaagaacccaag
accaaaaaggctcggaaggacccaggagagagagaagcgttttcatctgtccaagccatt
ttaagtaaagcagaaaaacataaatctcctcataaagtaaaaacagaacaattttcagat
gacagaaagaactgcagtcccaagaagcaaactaaatgtgaaagtttgataggatctcag
caacatttgaagtcattccctcacaaaataggagaaacttctccaaaagccagttccaag
gtggcccttttgaaaaaaaagggagagagttcttataaagaaacagagcctatggcttca
aaaagaaaaggaaatgctgttgaattaaaaggacagacaaaaactcctaagaaacccaaa
agttctccagctaaaaaagagtctgtaagtcctgaagattctgagaagagacgcactaat
tatcaagcttatcgaagctacttaaatagagaaggccccaaagctctgggctccaaagaa
ataccaaagggagctgaaaattgcttggagggccttacatttgtaatcacgggagtgctg
gagtccattgaacgagatgaggccaagtctctaattgagcgttacgggggaaaagtaaca
ggaaatgtcagcaagaaaacaaactaccttgtcatgggtcgtgatagtggacagtccaag
agtgataaggcagcagccttggggacaaatattattgatgaagatggcctattgaatctg
attcgaactatgccaggcaagaagtctaagtatgaaatagcagttgaagctgagatgaaa
aaagaaaagtccaaattggaaagaacacctcaaaaaaaagaccaaggaaaaagaaaaatt
agcccaactaagaaggagtcagaatctaaaaaaagcagactgactcccaaaaaggacagc
ttcataatgtcagtaaaaaaggaaaccagtgtgttttggagatgcctggactttgaagag
caggtggctgaggagacaaacggtgacagccgggctaggaatctggctgatgacagcagt
gaaagcaaagtggaaaatttgctctgggtggataaatataagccaacctcgctcaagacc
ataattggacagcagggtgaccagagctgtgccaacaaactcctccgctggctccagaac
tggcacaagagtccatccgaagataagaaacacgcagcgaagtttggtaagtttgctggc
aaagatgatggctctagttttaaagcagcactgctctcaggccctccaggtgttggcaag
acaaccacagcctctctggtttgtcaggaattgggatatagctacgtggaactgaatgca
agtgacactcggagtaagaacagtttgaaggaggttgttgctgaatcactgaataatacc
agcatcacaggcttttattcaacttctcagcatgggtcaggcggagcagcccattcagta
agcacgaaacatgctctcatcatggatgaagtagatggcatggcaggcaatgaggacagg
ggaggaattcaggaattaattggtctgataaaacatacaaaaattcccattatttgtatg
tgcaatgatagaaatcatcccaagattcgttctttggttcattattgttttgatcttcgt
tttcaaagacctcgagttgaacagattaagggtgctatgatgtctattgcatttaaagag
ggtttgaagatcccccctccagctatgaatgaaataattttgggagccaatcaagatatc
agacaggttttacacaatctgagtatgtggtgtgcacgaagtaaggcactaacctatgac
caggccaaggctgattctcatagagccaagaaggatatcagactgggcccatttgatgtt
gcccggaaagtgtttgcagctggagaggagactgctcatatgtcacttgtggacaagtca
gatctgttctttcatgattattcaatagcacccctctttgtccaggagaactacatacat
gtgaagcctgtagcggcagggggtgacatgaaaaagcacttgatgcttttaagcagagca
gcagatagcatatgtgatggtgacctagtggaccgtcagatccggagtaagcaaaactgg
agtcttctgcccacacaggccatttatgccagtgttcttcctggagagttaatgaggggg
tacatgactcagtttcctgccttcccaagctggttggggaagcactcatctaccggcaaa
catgatcgtattgtacaggacctagcactgcacatgagtctcagaacttattccagcaaa
aggactgtaaacatggattatctgtcccatataagggatgcacttgtacagcccttgacc
tcacagggggtagaaggagtacaggacgttattgctcttatggacacctactacttgatg
aaagaagactttgagaatatcatggaaattagcagctggggaggcaaatctagtcccttc
tccaagctggaccccaaggtgaaagcagccttcacaagaacttacaataaggaagcccac
cttactccatattcgcttcaggcagtaaagatacccagacacagcacaggcccagcactg
gattctgaatacagtgaagagttaaatgaagatgactctcaatctgatgagaaagaccaa
gactctgtggaaactgatgcaatgatcaagaaaaagacaaaatcttcaaagccttcaaaa
tcagaaaaagataaagagtccagaaaaggaaaaggaaaaagttcaaagaagtga
DBGET
integrated database retrieval system
