Eumetopias jubatus (Steller sea lion): 114226521
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Entry
114226521 CDS
T07240
Symbol
SPG11
Name
(RefSeq) spatacsin isoform X1
KO
K19026
spatacsin
Organism
eju
Eumetopias jubatus (Steller sea lion)
Pathway
eju05014
Amyotrophic lateral sclerosis
eju05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
eju00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
114226521 (SPG11)
05022 Pathways of neurodegeneration - multiple diseases
114226521 (SPG11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eju03400
]
114226521 (SPG11)
DNA repair and recombination proteins [BR:
eju03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
114226521 (SPG11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spatacsin_C
Motif
Other DBs
NCBI-GeneID:
114226521
NCBI-ProteinID:
XP_027982448
LinkDB
All DBs
Position
Unknown
AA seq
2442 aa
AA seq
DB search
MAAEKAAGGAAGRGTCSAKDMERVLPMLLVPVPVEATGRLGSRAQLHREQEVVGSLTAAG
SLQVLSLAPGGRSGGTCCLTGPFRHFVWEDSCNSSSPTDKPKLLALSENYELFIYEFNLK
DGRCDATILYSCSEETLQKLIEDQNISASLLSLRILSFHNNKSLLFINKCIVLHLVFPER
DAEIRVLSCFRLPLPAQAADRIIDTQLCRGILFVLSSLGWIYIFDTVDGTHVAHVDLALA
QEDRCNEQRQEPAKISSFTSLKVSQDLDVVVVVSSSNSAIALNFDLYFRQHPGHLLCERT
PEDIPIEGPKGIDEDDPVNSDYNMKLTKFSFQVDRSWKAQLSSLNETIKSSKLEVSYCAP
WFQNILHLESPESGNHSTSVPGWAFIPQHIMHSHYKFPQKDHANTSDPGRSWKIMNISEQ
EEHVELTCMSVTGFSALFTWAVERMGCTIVLWDMETQRMQCFSLDGKCIPIDTSGDQQLC
LVLTENGLSLILFGLTQEEFLNRLMIHGSASIVDSLCHLNGWERCSIPIHALEAGIENRQ
LDTVDFFLKSKENLLNPSSKSSVPDQLDDFPSHLYLRNVEKLTPALDLLCSAIRESDSET
QSKHFSEQLLNLTLSFLNKQIKELFVHNEELDEHLQKGVNILTSYINELRTFMIKFPWKI
IDTGDEYDVNENVPKVRESNIWEKLSVEEVIANAILNNKIPEAQTFFRINNHSAQRLEEL
IRIGLNLVFDNLKKNNIKEASELLKNMGFDVKDQLLKICFYTTDTNIRDFLVEILKEKNY
FSENEKRTIDFVHQVEKFYSGHFQENMQIQSFARYWIKEQDIFKHKSVLDSLLKYPKDKF
NKQDHRVVLNWAQWWNQLTQESILLPRISPEEYKSYSPEALWSYLTARHDWSSIILWIGE
FQTQNSCASLEQNRWPLLTVDVIDRHTCCNSYMRNEILDQLARNGIFLKSELEDFELFLL
RLNRIGGVMQDALPIQDYRSKEGWDFHSHFILYCLEHGLQYLLYVYLDCYKLSPSNCPFL
EKKELHEAYPWFEFLVQCRQVSSNLTDPKLIFQASLANAQILIPSNQASISSMLLEGHTL
LALATTMYAPGGVSQVVQNDENETCLKKVDPQLLKMALTPYPKLKTALFPQYTASNVLPP
DITLYHLIQSLLPFDPSRLFGWQSANTLAIGDAVSHLPHFSSPDLVNKYAIVERLNFAYY
LQHGRPSFAFGTFLVQELTKSKTPKQLILQVGNEAYVLGLSSFYIPSVGAACVCFLELLG
LDSLKLRVDMKVANIILSYKCRNEDAQYSCIRESLAEKLSKLAVGEKATIEELLILLEEG
IWNSIQQQEIKRLSSESSSQWALAVQFCRLHNVKLSMSYLRECAKANDWLQFIIHSQLHN
YHPEEVKSLLQYFSPVLQDHLRLAFENLTSESNSRMDSDQVCSRAPPELQRNQEEMADFF
EVLLRCSEEPNSWCWLLAEGVRQQAPILSVLASCLQDASTIPCLCVWIITSVEDSVAAEA
TEHIQGSMEEHMWDLQDLSVIWRTLLTKRKSKTLIRGFQLFFKDSPLLLMMEMYELCMFF
KNYKEAEAKLLEFQKSFETVETAATRVHATIPAPWLKEQVCFLLKLMLQQCGTQYELGKL
LQLFVGIEKLFSDGPDVKKLCVLSQILKDTSIAISHGIISSYSLENFQHECRSILEKLET
EGQFALARRVAELAELPVDNLVIEEITREMQTLKHTGQWSLKQARIDFWKKCHESFQKNS
ISSRAASSFFSAQAPEAPEPPAEEGQSRTEERHLLLTLAAYWLAQEGLGPVDELEELEKQ
IWLCRITQHTLREKQETEPRFSQHISTSGELSFDSVASKFSLSMLAALNTSKYLELNGLP
SKETCENRLDWKGQESLDFLIGRLLDDGCVHEASRVCRYFHFYNQDVTLVLHCRALASGE
ASVDDLRPEIHALLQSAERLEEEEPGIPLRKVQSTSSLDSHSFVMLPPSDEVVTNLETLT
SKCLHGKSYCRQVLCLYELAKELGCPYTDVAAQDGEAVLRAVLASQRPDRCKRAQAFLST
QGLAPDTVAELVAEEVTRELLTPSEGTGQKQMFTPAEESQTFLQLTTLCQDRTLVGMKLL
DKVSSVPHGELSCTTELLILAHHCFTLTCHMEGIIRVLQAARLLTDKHLAPNEEYGLMVR
LLTGMGRYNEMTYIFDLLHKKHYFEVLMRKKLDPSGTLKTALLDYIKRCRPGDSEKHNMI
ALCFSMCREIGENHEAAACIQLKLIESQPWEDSLKDGHHLKQLLLKALTLMLDAAESYAK
DSCVRQALHCHRLTKLITLQIHFLNTGQNTMLINLGRHQLMDCLITLPRFYQASIVAEAY
DFVPDWAEILYQQVILKGDFNYLEEFKQQKLLRSSIFEEISTKCKRQQPADTAVKNLKKL
LTYCEDVYLYYTLAYEHKFCDIVNVLLKDPQTGCCLKDMLAG
NT seq
7329 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagaaaaggccgcgggaggagctgctggccgcggcacctgcagcgctaaagac
atggagcgggttctacctatgctgttggtgccggtccctgtggaggcaacggggcggctg
ggatctcgggcgcagttgcacagagagcaggaggttgtggggagcctaacagctgcaggc
agcctgcaagtgctttccttggcgccaggcggccggagcgggggtacctgctgcctcact
ggcccctttcggcactttgtatgggaggattcttgtaacagcagctcaccaacagacaag
cccaaactgcttgctcttagtgaaaattatgaactgtttatctatgaatttaatttgaaa
gatggaagatgtgatgcaaccattttgtatagctgtagcgaggagacattgcaaaagctc
attgaagatcaaaatatcagtgcttccttattatctttgagaattctgtcatttcacaat
aacaaatcactattgttcatcaacaaatgtattgtcctacaccttgtatttcctgaaaga
gatgctgagatcagagtactcagctgtttcaggttacccttgcctgcgcaggcagcggac
aggattattgacacacagctctgcagaggaattctttttgttttgagtagtttaggctgg
atctacatctttgacacagtggacggtacacatgtagctcatgtggatttagcacttgcc
caggaagataggtgtaatgagcaacgacaggagccagccaagatttcttcctttacttcg
ctgaaagtgtctcaagacctagatgttgtagtggttgtcagctcctccaactctgcaatc
gctcttaacttcgatttgtatttcaggcaacacccaggacacctactatgtgaaagaact
ccagaagacattcctattgaaggccctaaggggatagatgaagatgatcctgttaattct
gactacaacatgaaactgaccaagttttcctttcaagttgataggtcgtggaaagcccag
ctatcatcattgaatgaaacaataaagagctccaaactggaggtttcctattgtgctcca
tggttccagaatattttgcatttggaatcccctgaatctggtaaccacagtaccagtgtg
ccaggctgggccttcattccacagcacataatgcacagccactataagtttccacagaag
gatcatgccaacaccagtgacccagggagatcatggaaaatcatgaacattagtgaacaa
gaggaacatgttgagcttacctgtatgtctgtgacaggattcagtgcactgtttacttgg
gcagtggaaaggatgggctgcaccattgtcctttgggatatggagacccagcgtatgcag
tgtttctcccttgacggaaagtgtattcctatagacactagcggagaccagcagctgtgc
cttgttttgacagaaaatggactctctctgattttgtttggattgactcaggaggaattt
ttaaatagactaatgatccatggaagtgccagcattgtggactctctttgccatctcaat
ggttgggagaggtgctcaatccccatacatgcgctggaggctgggatagaaaatcgtcag
ctggacacagtagatttctttttgaagagcaaagaaaaccttttgaatccatcctcaaaa
tcttctgtacctgatcagcttgatgactttccatctcatttgtatttaagaaatgtggaa
aagctgacaccagcattggatttactttgctcagcaattagagaaagtgattctgaaacc
caaagcaaacacttttcagaacagttgcttaatcttacactgtcttttcttaacaaacaa
ataaaagagctttttgttcacaatgaagaactagatgaacatctacagaaaggagtgaac
attttgaccagctacattaatgaacttcgaaccttcatgataaagtttccttggaagata
atagatacgggagatgaatatgacgtaaatgaaaatgttcccaaagtaagagagagcaat
atatgggagaaactcagcgttgaggaagttattgccaatgctattttaaacaacaaaata
ccagaggcacagactttcttcaggattaacaatcattctgctcaaagacttgaggagctg
attagaataggcctaaatttggtcttcgacaacttgaaaaagaacaatataaaggaagcc
tctgaacttttgaagaacatgggctttgatgtaaaagaccagttgctcaagatatgcttc
tatacaactgatacaaatatacgggactttttggttgaaattttaaaagaaaaaaattat
ttttctgaaaatgaaaaaagaactatagacttcgtgcatcaagtcgagaagttttattca
ggacatttccaagaaaatatgcagatccagtcctttgccaggtattggataaaggaacag
gatattttcaagcacaaatctgttttggactcactcctgaaatatcccaaagataaattt
aacaaacaggaccatagagttgtgttaaattgggctcagtggtggaatcagctaacacaa
gaatccatccttctccccaggataagtccagaagaatacaaatcgtattctcctgaagcc
ctctggagctatctcacagctcgccatgactggtcaagcattatcttgtggattggagaa
tttcagactcagaacagttgtgcttcgcttgagcagaacagatggccccttctgactgtt
gatgttatcgatcggcatacttgctgcaacagctacatgaggaatgaaattttagatcag
ctggccaggaatgggatttttcttaagtctgaactagaagactttgaactcttcctgcta
agactgaaccgcatcgggggtgtgatgcaagatgctctccccattcaagactacagatcc
aaggaaggttgggatttccattctcacttcattctctattgtttggagcacggtctgcag
tatcttctctatgtctatcttgactgttacaaactgagcccttcaaattgtccctttttg
gaaaaaaaagaattacatgaagcttacccttggtttgaatttttagttcagtgtcgacaa
gtttccagtaatttaacagatcccaaactgatcttccaggctagccttgcaaatgctcag
atactgattcccagcaaccaggccagtataagcagtatgctattggaaggacataccctc
ctggcccttgctacgacaatgtatgcccctgggggtgtcagccaggttgttcagaatgat
gaaaatgagacctgtttgaagaaagtagatccccagttactgaagatggcattaactcct
tatcccaagctaaaaactgctctcttcccacaatacactgcctctaatgtcctgccaccc
gatattacgctttaccaccttattcagtcactgttgccctttgaccctagcagattgttt
ggctggcagtctgccaacacactggctataggagacgcagtgagtcatctgccacatttt
tctagccctgacctagttaataaatatgctatagtggaacgtctgaattttgcatattat
ttacaacatggacggccatcatttgcatttggtacttttctggtccaggaattaaccaag
agcaagactcccaagcagctgatcctgcaagtaggcaatgaagcctatgttttagggctc
tcctccttctacataccttcagtaggagctgcctgtgtttgtttcttagaactgcttggc
ctcgacagcctcaagctcagagttgatatgaaagtggccaatatcattttgagctacaag
tgtagaaacgaagatgctcagtacagctgtatcagagagtctctagctgaaaaactatct
aaactggctgtgggtgaaaaggccaccatagaggaattgcttattctcttagaagaaggt
atatggaacagcattcagcagcaggaaataaagaggttatctagtgaatctagcagccag
tgggcattagcagtacagttctgcaggcttcacaatgtgaaactgagcatgtcttatctc
agagaatgtgccaaagcaaacgattggttacagttcattattcacagccaactccataac
tatcacccggaggaggtgaaatctcttcttcagtatttcagtcctgtccttcaagaccac
ttaagactggcttttgagaacttgacctcagagtctaactccagaatggacagtgatcaa
gtgtgcagcagggcccccccggaactccagagaaaccaagaagagatggctgattttttt
gaggttctgctccggtgctcagaggagccaaactcctggtgctggctcctagctgaagga
gtgagacaacaggcccctatccttagtgtcctggcctcatgcctccaggatgccagtact
attccttgtctctgtgtttggatcatcacgtcggtggaggacagtgttgcagctgaagca
acagaacacattcagggctcaatggaagaacacatgtgggacctgcaagacctctcagtc
atctggagaacgttattaacaaagcggaagagcaaaactctcatcagaggtttccaactt
ttctttaaggattccccactactgttgatgatggagatgtatgaactgtgtatgttcttc
aagaattataaggaagctgaagctaaacttctggagtttcaaaagagctttgaaactgtt
gaaacggcagccacaagggtccacgctaccatccctgccccttggctgaaggagcaggtg
tgtttccttctgaagcttatgctgcagcagtgtgggacccagtatgaactggggaagctt
ttacagctctttgttggaatagaaaagctcttctctgatggtccagatgtgaagaagctc
tgtgtccttagccaaattttaaaggacacatccatagccattagtcatggaattattagc
agctacagccttgagaattttcagcatgaatgtagatctattttggaaaaactggagaca
gagggacagtttgctttggccagaagggtagcagaattagcagaactacctgtggacaac
ttggttattgaagagataacacgggaaatgcagaccttaaaacacactggccagtggtcc
ctgaaacaagcaagaattgacttctggaaaaaatgtcatgagagttttcagaaaaattcc
atttcaagcagagcagcttcttcctttttctcagctcaggccccggaggcacctgagccc
ccagctgaggagggccagagccgcacggaggagcggcacctgctgctcacactggcagca
tactggctggctcaggagggcctggggcctgtggacgagctggaggagctggagaagcag
atctggctctgccgcatcacccagcacaccctcagagaaaaacaggaaacagagcccagg
ttttcacagcacatctcaactagtggggaactttcctttgatagcgtagccagtaagttt
tcactctccatgttggctgctctgaacacatcaaaatacttggaacttaatggccttcca
tccaaagagacttgtgagaacagactggattggaaggggcaggagtcactggactttctg
attgggcgcctattggatgatggctgcgtgcatgaagcaagtagagtatgtcggtatttt
catttctataaccaagatgtcaccttggtgttgcactgcagagcactggcctcaggggaa
gctagtgtggatgacctgcgcccagagatccatgctctcctacaaagtgccgagcggctt
gaggaagaagaacctggcattccactaaggaaagtccagagcacttcaagtttggatagt
cattcgtttgtgatgctgccccccagtgatgaagtggtgactaatctggaaactctgaca
agcaaatgccttcacgggaagagctactgccggcaggtcctgtgtctgtatgaacttgcc
aaggagctgggctgtccctacacagacgtggccgctcaggatggcgaggcagtgctccgg
gcggttttggcttctcagcggcctgaccgatgcaagcgcgcccaggctttcctcagtacc
cagggcctcgcgccggacacggtggctgaacttgtggctgaagaggtgacccgggagctg
ctgaccccatcggagggaacaggacagaagcagatgttcaccccagcagaggaaagccag
acatttcttcagctgaccacgctgtgtcaagaccgcacgctggtgggcatgaagttgttg
gacaaggtttcctccgttccccatggggaactgtcttgcaccacggagctgctgatcctg
gcccatcactgcttcacgctgacatgccacatggagggcatcatccgagtcctgcaagct
gcccggctgctcacggacaaacacttggcccccaatgaggagtatgggctgatggtgcgt
ctcctcactggcatgggaaggtacaacgagatgacctacatatttgacttgctgcataaa
aagcactactttgaagtgctgatgaggaagaagttggatccgagtggcaccctgaagacg
gcgctcctagactacatcaaacgttgccgccccggggacagcgagaagcacaacatgatt
gctctgtgcttcagcatgtgtcgggagatcggggagaaccacgaggcagctgcctgcatc
caactgaaattgatcgagtcccagccctgggaggacagcctcaaggacggacaccacctg
aagcagctgctgctgaaagccctgactctgatgctggatgcagcggagagctacgccaag
gactcctgtgtgcgacaggccctgcactgtcaccggctcaccaagttgataacactgcag
attcactttctgaacacgggccagaacacgatgctcatcaacctgggccgccaccagctg
atggactgtctcatcactctacctcgcttctaccaggcttctattgtggctgaggcctat
gactttgttcctgattgggcagaaatcctctaccaacaagtgattcttaaaggagacttt
aattacctggaagaatttaagcagcaaaagttattaagatctagtatatttgaagagatt
tccacaaaatgtaaacggcagcagccggcggacacagctgtgaaaaacctgaagaagcta
ctcacgtactgtgaagacgtctacctgtattacacgcttgcgtatgaacacaaattttgt
gacattgtaaatgtgttgctgaaggaccctcagactggctgctgtctgaaggacatgcta
gcaggttag
DBGET
integrated database retrieval system
