Enterobacter kobei DSM 13645: BFV64_00450
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Entry
BFV64_00450 CDS
T04686
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ekb
Enterobacter kobei DSM 13645
Pathway
ekb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ekb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BFV64_00450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ekb03400
]
BFV64_00450
Enzymes [BR:
ekb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BFV64_00450
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BFV64_00450
DNA repair and recombination proteins [BR:
ekb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BFV64_00450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AOP84917
UniProt:
A0A156SKW0
LinkDB
All DBs
Position
90110..90919
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AA seq
269 aa
AA seq
DB search
MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSDEIHALSDKPVLSVQRRAKYLL
LELPDGWIIIHLGMSGSLRILTEELPAEKHDHVDLVMSNGKVLRYTDPRRFGAWLWTKEL
DGHNVLAHLGPEPLSDAFNAEYLKAKCAKKKSPIKPWLMDNKLVVGVGNIYASESLFAAG
IHPDRLASSLSAQECELLVRVIKAVLLRSIEQGGTTLKDFLQSDGKPGYFAQELQVYGRK
GEPCRVCGTPVIATKHAQRATFYCRQCQK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacctgaggtagagaccagccgccgcggcattgagccccatctggtcggc
gcgacgattcttcatgctgtcgttcgcaatggacgtctgcgctggccggtgtccgatgag
atccacgcgttaagcgataaacccgtgcttagcgtgcagcgccgcgcgaaatacctgctg
ctggagctgcctgacggctggattatcatccatctggggatgtccgggagcctgcgcatc
cttactgaagaactgcccgcggaaaagcacgaccacgtcgatctggtgatgagcaacggc
aaagtgctgcgttacaccgacccacggcgctttggcgcgtggctgtggactaaagagctg
gacgggcacaacgtgctggcgcatctgggcccggagccgctctcagacgcgtttaatgcg
gaatacctgaaagcgaagtgcgcgaagaagaagagcccgattaagccctggctgatggat
aacaagctggtggtcggcgtggggaatatctatgccagcgaatcgctgtttgccgccggg
atccatcccgatcggctggcctcttcactgtcggctcaggagtgcgagctgctggtcaga
gtgattaaagcggtattgctgcgctcgattgagcagggcggaaccacgctgaaggatttc
ctgcaaagcgacggcaagccgggctattttgctcaggagctgcaggtgtatggccgtaaa
ggcgagccatgcagagtctgcggaacgccagttattgccacgaagcacgcacagcgcgcc
acgttctactgccgtcagtgtcagaaatag
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