Enterobacter kobei DSM 13645: BFV64_14550
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Entry
BFV64_14550 CDS
T04686
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
ekb
Enterobacter kobei DSM 13645
Pathway
ekb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ekb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BFV64_14550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ekb03400
]
BFV64_14550
Enzymes [BR:
ekb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
BFV64_14550
DNA repair and recombination proteins [BR:
ekb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
BFV64_14550
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BFV64_14550
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BFV64_14550
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_SH3
ExoI_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AOP87502
LinkDB
All DBs
Position
3013054..3014478
Genome browser
AA seq
474 aa
AA seq
DB search
MSDSAARPTFLFHDYETFGTHPALDRPAQFAAIRTDDEFNIIGEPEVFYCKPADDYLPQP
GAVMVTGITPQEAREKGVNEAEFARRIHDLFTVPNTCVVGYNNIRFDDEVTRNVFYRNFY
DPYAWSWQNRNSRWDLLDIMRACYALRPEGINWPENEEGLTSFRLEHLTRANGIEHSNAH
DAMADVYATIAMAKLVKAAQPRLFEYLLSHRSKQKLMTLIDVPQMKPLVHISGMFGAWRG
NTSWVAPLAWHPDNRNAVIMVDLAGDISPLLELDSDTLRERLYTPKNELGDLPAVPVKLV
HINKCPVLAQANTLRPEDADRLGINRQHCLDNLKVLRENPQVREKVVAIFAEAEPFVPSE
NVDAQLYNGFFSDADRAAMNIVLQTEPRNLPALDITFADKRIEKLMFNYRARNYPGTLDE
TEQERWLQHRRNVFTPEYLHNYAQELEMLYGQYEGNAEKQALLKALFQYAQEIV
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgactctgccgcacgccccacttttttattccacgactatgaaacctttggcacg
cacccggcgctggaccgaccggcgcagtttgccgccatccgtaccgacgacgaattcaac
atcattggcgagcctgaggtcttttactgcaaacctgctgatgattacctgccgcagcca
ggcgcggtcatggtcaccgggatcacccctcaggaagcacgggagaaaggggtgaacgag
gcggaattcgcacgccgcatccacgatctgtttaccgtccccaatacctgcgtggtaggt
tacaacaacatccgtttcgatgacgaagtgacccgcaacgttttctatcgcaacttctac
gatccgtacgcctggagctggcagaaccgcaactcgcgctgggatctgctggatatcatg
cgcgcctgttatgccctgcgtcctgaaggcatcaactggccggaaaatgaggaaggtctg
acgagcttccgcctggaacacctgacgcgcgctaatggcattgagcacagcaatgcccac
gacgcaatggcggacgtctatgccactattgccatggcgaagctggtgaaagccgcgcag
ccccggctgtttgagtatttgctgagccatcgcagcaagcagaagctcatgacccttatc
gatgtgccgcagatgaaacccctggtgcatatctccggtatgttcggtgcctggcgcggc
aatacaagctgggtggcaccgctggcgtggcatccggacaaccgtaacgccgttatcatg
gtggatttagcgggcgatatttcgccgctactggaacttgacagcgataccctgcgcgaa
cggctctacaccccgaaaaatgagcttggtgacctgcccgcggtgccggtcaaactggtg
catatcaataaatgtccggtactggcgcaggcgaatacgctgcgcccggaggatgctgac
aggctgggcattaaccgtcagcactgcctggataacctgaaagtgctgcgcgaaaatccg
caggtacgcgagaaagtggtcgcgatcttcgccgaagcggagccgtttgtgccgtcggaa
aacgtcgatgcacagctctacaacggcttcttcagcgatgccgaccgtgcagcgatgaat
attgtcctgcaaaccgagccgcggaacctgccggcgctggacatcactttcgccgataaa
cgcatcgaaaagctgatgtttaattaccgcgcacgtaactaccccggcacgctggatgaa
acagagcaggagcgctggctgcagcatcgtcgtaacgtgtttacgccagagtatctgcac
aattacgcccaggagctggagatgctttacggtcagtacgaagggaatgcagagaaacag
gcgctgctgaaagcgctgttccagtacgcgcaagagatagtctga
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