Enterobacter kobei DSM 13645: BFV64_16980
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Entry
BFV64_16980 CDS
T04686
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
ekb
Enterobacter kobei DSM 13645
Brite
KEGG Orthology (KO) [BR:
ekb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ekb03009
]
BFV64_16980
Enzymes [BR:
ekb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BFV64_16980
Ribosome biogenesis [BR:
ekb03009
]
Prokaryotic type
rRNA helicases
BFV64_16980
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
DUF561
AAA_11
LuxC
CMS1
Motif
Other DBs
NCBI-ProteinID:
AOP87948
UniProt:
A0A0P8J3N7
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All DBs
Position
3541113..3542441
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AA seq
442 aa
AA seq
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MTVTTFSELELDESLLNALESKGFTRPTAIQAAAIPPALEGRDVLGSAPTGTGKTAAYLL
PVLQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAANTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW
RNQTMLFSATLEGDAIKDFAERLLEDPVEVSATPSTRERKKIHQWYYRADNLEHKVELLK
HLLKQEDALRTIVFVRKRERVHELAEMLRNAGINNCYLEGEMAQVKRTEGIKRLTDGRVN
VLVATDVAARGIDIPDVSHVINFDMPRSGDTYLHRIGRTGRAGRKGTAISLVEAHDHLLL
QKIGRYVDEPLKSRVIDGLRPTTRAPSEKMTGKPSKKALAKRAERKEKEKEKPRVKQRHR
DTKNIGKRRKPSAAAQDTKTEE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaacgactttttccgaacttgaactcgatgaaagcctgctcaatgcacttgag
agcaaaggctttacacgcccgaccgccattcaggcagcggccattccgcctgcgcttgag
ggccgcgatgtgctcggttctgcgccaaccggcacggggaagacagcagcctatttgctg
cctgtgttgcagcacctgctcgactttccacgaaaaaaatcaggcccaccgcgtattttg
atcctgacgcctacgcgcgagctggccatgcaggttgccgatcacgcgcgtgagctggcg
gctaacacccatctggatatcgccactattaccggcggcgtggcgtatatgaaccacgcc
gaagtgttcagcgaaaaccaggatatcgttgttgcgacgacgggccgtttgctgcagtac
attaaagaagagaacttcgactgccgcgcggtagaaacgctgattctggatgaagccgac
cgtatgctggacatgggcttcgcacaggatatcgaacatattgcgggcgagacgcgctgg
cgtaaccagacgatgctgttctctgccacccttgaaggggacgcgattaaagatttcgcc
gagcgtctgctggaagatccggttgaagtctctgcgacgccctctacgcgtgagcgcaag
aagatccaccagtggtattaccgtgcggacaaccttgagcacaaggtcgaattactgaag
cacctgctgaagcaggaagatgctctgcgtaccatcgtctttgtgcgtaaacgcgagcgc
gtgcacgagctggcagaaatgctgcgtaatgcgggcattaataactgctacctcgaaggt
gagatggcgcaggttaagcgtaccgaaggcatcaaacgcctgaccgatggccgcgtgaac
gtgctggtggcgacagacgttgccgcacgcgggatcgacattccggacgtgagccacgtg
atcaacttcgatatgccgcgcagtggtgatacctatctgcaccgcattggccgtaccggt
cgcgccggacgtaaaggtactgcgatttcactggttgaagcgcacgatcacctgctgctg
caaaaaattggtcgctatgttgatgagccgctgaaatctcgcgtcattgacggcctgcgc
ccaactacccgcgcgccgagtgaaaaaatgacgggcaaaccgtccaagaaagcactcgca
aaacgcgctgagagaaaagagaaagaaaaagagaagccgcgcgttaagcaacgccaccgc
gataccaaaaacattggtaagcgtcgtaagccaagcgctgccgcgcaggatacgaaaact
gaagagtaa
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