Enterobacter kobei DSM 13645: BFV64_21175
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Entry
BFV64_21175 CDS
T04686
Name
(GenBank) RNase E specificity factor CsrD
KO
K18765
RNase E specificity factor CsrD
Organism
ekb
Enterobacter kobei DSM 13645
Brite
KEGG Orthology (KO) [BR:
ekb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ekb03019
]
BFV64_21175
Messenger RNA biogenesis [BR:
ekb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BFV64_21175
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAPES4
Motif
Other DBs
NCBI-ProteinID:
AOP88706
UniProt:
A0A2J0PF95
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All DBs
Position
complement(4372729..4374669)
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AA seq
646 aa
AA seq
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MRLTTKFSAFITLLTGLTIFVTLLGCSLSFYNAIQDKLVNRVQSVASVIDTRLLTTPLPS
LSRELDELMVPVDIIRIDIQQGKHQVLSHERQGSYRPAGVVSQYREVTVHSLKNPGMTIH
MVYLDPMASYFRSMMTTAPLTIAVAFIILLIFLAVRWLRRQLSGQELLEIRSVRILNGER
GPQVRGSVHEWPSRTSSALDTLLSEIQFASDQRSRMDTLIRSYAAQDNKTGLNNRLFFDN
QLATLLDDSEKVGTHGVVMMIRLPDFDLLRDTWGQRAAEENLFTLINLLSTFIMRYPGAL
LARYHRSDFAVLLPHRTLKESESIASQLLKAVDALPQSKMLDRDDMVHMGICAWRGGQST
EQVMEHAESATRNAVLQGANGWAVYDDSLPEKGRGNVRWRTLIEQMLSRGGPRIYQKPAV
MKNGYVHHRELMCRIFDGTEEVISAEYLPMVLQFGLSEEYDRQQISRLIPFLSFWPEESL
ALQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIFELAEADVGQHISRLRPVVRLINALG
ARVAVTQAGLTLVSTDWIKELDVELLKLHPGLVRNIEKRTENQLLVQSLVEACKGTRTQV
FAAGVRSRGEWQMLTERGVMGGQGDFFAASQPLDTNVKKYLQRYSV
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgcgattaacgacgaagttctcggcttttatcaccttgctaacggggctgaccatcttt
gtcacgcttctgggttgctctttgagcttttataacgccattcaggacaaactggtcaac
cgggtgcagtctgttgcgtcggtcattgatacgcgtctgctgaccacgccactcccgtcg
ctctcccgggaactggatgagttgatggtgccggttgatattattcggatcgatattcag
cagggaaagcatcaggttttaagccatgaacggcagggaagttatcgccctgcgggcgta
gtgagtcagtaccgggaagtaacggtgcactcccttaaaaacccgggtatgaccattcac
atggtatatctcgatccgatggccagctatttccgttccatgatgaccaccgcgccgctc
acgatcgcggttgcattcattattctgctcatttttctcgcggttcgctggttgcgccgc
cagctctcagggcaggaactgctggaaatccgctccgtccgcatcctgaacggtgagcgc
ggcccgcaggtgcgcggctctgttcatgaatggccgtcacgcaccagcagtgcgctggat
acgttgctctcagaaattcagtttgccagcgaccagcgcagccgtatggatacgctgatc
cgctcttatgccgcgcaggataataaaaccggccttaacaaccgccttttctttgataat
caactggccacgctgctcgacgattcggaaaaagtgggcactcacggcgtggtgatgatg
attcgcctgcccgatttcgatctgctgcgcgacacatgggggcagcgggccgcggaagaa
aatctctttacgctgatcaacctgctctccacctttatcatgcgctaccccggggcacta
ttggcccgctatcaccgcagcgactttgccgtgttattgccgcatcgcacgctaaaagag
tcggaaagtattgccagccagctgctgaaggcggtagacgcgctgccccagagtaaaatg
ctcgatcgcgacgacatggtgcatatggggatctgcgcctggcgcggcggtcagtcgacg
gagcaggtgatggagcatgcggaatcggctacccgcaacgccgtgttgcagggggcgaac
ggatgggccgtttacgatgactcgttaccggaaaaagggcgtggaaacgtgcggtggcgt
acgttaattgagcaaatgctgagccgcggtgggccacgtatttatcaaaaaccggcggtc
atgaaaaacggctatgtccaccatcgcgaactgatgtgccgtatttttgacggtacggaa
gaggttatttctgcggaatatctgccaatggtgctgcaatttgggctgtctgaagagtat
gaccgccagcaaatttcccgcctgatcccatttttatctttctggccggaagaaagtctg
gcgttacaggtcaccgttgagtcgttaatacgcccgcgttttcagcgctggctgcgtgat
acattaatgcaatgcgaaaaatcgcaacgcaaacgcattatttttgaacttgctgaggcg
gatgtgggtcaacacatcagccggttacgtccggtggttcgtttgatcaacgcgctcggt
gcgcgtgtggcggtgacacaagctggtttaacgctggtcagtaccgactggatcaaggaa
ctggatgtggagctattaaagctgcatccggggctggtaagaaatattgaaaagcgcacg
gaaaaccagctgctggttcagagtctggttgaagcgtgtaaaggaacccgaacacaagtc
tttgccgcgggcgtgcgctccaggggcgaatggcagatgttaacagagcgcggtgtcatg
ggtggtcagggcgatttttttgccgcctctcaaccgcttgacaccaacgtgaaaaaatat
ttgcaaagatactctgtttga
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