Epidermidibacterium keratini: EK0264_11425
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Entry
EK0264_11425 CDS
T06370
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
eke
Epidermidibacterium keratini
Pathway
eke03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eke00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EK0264_11425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eke03019
]
EK0264_11425
03400 DNA repair and recombination proteins [BR:
eke03400
]
EK0264_11425
Enzymes [BR:
eke01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EK0264_11425
Messenger RNA biogenesis [BR:
eke03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EK0264_11425
DNA repair and recombination proteins [BR:
eke03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EK0264_11425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
DUF4350
RecQ_Zn_bind
DUF5817_CT
Motif
Other DBs
NCBI-ProteinID:
QHC02408
UniProt:
A0A7L4YTK9
LinkDB
All DBs
Position
2357945..2360080
Genome browser
AA seq
711 aa
AA seq
DB search
MQIQEELTGEYADIAARTLAALAGPQARLRDDQQRAVSALVQDGARVLVVQATGWGKSAV
YWVATAIRRQSSAKGGMTLVVSPLLSLMRDQVAAAERAGLTARTLNSSNIDDWSAIEGEL
ARDEVDVLLVSPERLANPKFGTRVMESLAGRIGLLVIDEAHSISDWGHDFRPDYRRISAV
MQQLNPDAAVLATTATANQRVTDDVAAQLGEQALVLRGPLARSSLQLVVTPDTDPLSRFA
WVCDQLDRLPGSGIVYTLTVSDAEQLTAAIKAVRGDDYPVAAYTGQLEADTRTALEDRLR
RNDIKALVATSALGMGFDKPDLGFVVHVGAPPSPVSYYQQVGRAGRGIDNAVVVLLPSYA
DRHVWDYFATATIPVPEQVERVLDALREAGEPQSVVKLEAATGVRRTRVELILKQLAVDG
VTERGDGGWIATGAEWHYDKEHYDSVVATRKREAAIMQDYAAGARCLMQLLQESLDDPSA
APCGRCSVCDPAAAQQYVAPPPSEVREQVATVLRRQVHSLEPRKMWPGPPSERRGRISGE
QSAGWGRVLVEYDAPQWQDLAAEMDSDAPASEALQQAVVALLAAWARGTSRDSPWPQRPE
VVVDLPAGGLSSLTSSVADFIAQTGKMGRASFESEALQLGVRRAASEDLTSPASAALWDG
SLVAPTGLDGAVVLLVLDRDPSSWAATVGAAKLREAGASIVLPLLLRRTAG
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
gtgcagatccaagaagagctcactggcgagtacgccgatatcgcagcgcgcacgctcgca
gcgcttgccggaccgcaggcccggctgcgtgacgatcagcagcgagcggtcagcgcgctt
gtccaagacggcgctcgcgtgctcgtcgtccaggcgaccggctggggcaagtcggccgtc
tactgggtcgcgaccgcgatccgccgccagagcagcgcgaagggtgggatgacgctcgtc
gtctcacctctgctctcgctcatgcgtgaccaggtcgccgccgccgagcgggccggattg
accgcccgcaccctcaactcctccaacatcgacgactggtcggcgatcgagggcgagctc
gcgcgcgacgaggtcgacgtactgctcgtctcgcccgagcgcctggccaacccgaagttc
ggcacccgggtgatggagtcgctggccgggcggatcggactgctggtcatcgacgaggcg
cactcgatctccgactggggccatgacttccgccccgactaccggcggatcagcgccgtc
atgcagcagctcaaccccgatgccgccgtacttgccacgaccgcgaccgccaaccagcgc
gtcaccgacgatgttgccgcccagctcggtgagcaggcgctcgtgctgcgcggccccctg
gcgaggtccagcctgcagttggtcgtgacgccggataccgatccgctgagccggtttgcg
tgggtgtgcgaccagctcgaccggctgcccggctccggcatcgtctacacactcactgtg
tccgacgccgagcagctgaccgccgcgatcaaggcggtgcgcggcgatgactatccggtg
gcggcctacaccggccagctcgaggccgacacccgcaccgcgctggaagatcgcctgcgg
cgcaacgacatcaaggcactcgtcgcgacgtcggcattgggcatgggcttcgacaagccg
gacctcgggttcgtcgtccacgtcggcgcgcccccgtcgccggtgtcgtactaccagcag
gtcggacgtgccggccgcggcatcgacaacgccgtggtggtcttgctgccctcgtacgcc
gaccggcacgtgtgggactacttcgccactgcgacgattcccgttcctgagcaggtcgag
cgcgtgctcgatgcgctgcgcgaggccggcgagccgcaaagcgtcgtcaagctggaggcg
gcgaccggcgtacgccgcacccgcgtcgagctgatcctcaagcagctggcggtcgatggc
gtgaccgagcgcggtgacggcggctggatcgcgacgggcgccgagtggcactacgacaag
gagcactacgactccgtcgtcgcgacccgcaagcgcgaagccgcgatcatgcaggactac
gccgccggtgcgcggtgtctgatgcagctgctgcaggagagcctggatgacccgagcgcg
gcgccgtgcggacgatgctcggtgtgtgacccggccgccgcgcagcagtacgtcgccccg
ccgccaagtgaggtgcgcgagcaggtcgcgacggtgctgcgtcgccaggtgcattcgcta
gagccgcgcaagatgtggcccggtccgcccagtgagcgccggggacggatcagcggcgag
cagtccgccggctgggggcgggtgctcgtcgagtacgacgctccccagtggcaggatctc
gccgccgagatggactccgacgcgcccgcgagcgaagcgctgcagcaggctgtcgtcgcg
ctgctggccgcgtgggcgcgcggcacctcgcgcgactcgccgtggccgcagcgacccgag
gtcgtcgtcgacctgccggccggtggactgtcgagcctgacctcgtcggtggccgacttc
atcgcccagaccggcaagatgggccgagccagcttcgaatccgaggcgctgcagctcggc
gtacgccgagcggcatccgaagacctgacgagcccggcctcggctgcgctgtgggacggc
agcctcgtcgcgcccaccggcctggacggcgcggtcgtgctgttggtgctcgaccgcgac
ccgagcagctgggcggcgaccgtcggtgcggccaagctgcgcgaggccggcgcgtcgatc
gtccttccgctgctgctgcgtcgcacagccggctga
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