Escherichia coli KO11FL: KO11_07845
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Entry
KO11_07845 CDS
T02104
Symbol
yghJ
Name
(GenBank) inner membrane lipoprotein
KO
K10939
accessory colonization factor AcfD
Organism
ekf
Escherichia coli KO11FL
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4092
Peptidase_M60
M60-like_N
Trypan_PARP
CooC_C
Motif
Other DBs
NCBI-ProteinID:
AFH16550
LinkDB
All DBs
Position
1663796..1668358
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AA seq
1520 aa
AA seq
DB search
MNKKFKYKKSLLAAILSATLLAGCDGGGSGSSSDTPPVDSGTGSLPEVKPDPTPNPEPTP
EPTPDPEPTPEPTPDPEPTPEPEPEPVPTKTGYLTLGGSLRVTGDITCNDESSDGFTFTP
GDKVTCVAGNNTTIATFDTQSEAARSLRAVEKVSFSLEDAQELAGSDNKKSNALSLVTSM
NSCPANTEQVCLEFSSVIESKRFDSLYKQIDLAPEEFKKLVNEEVENNAATDKAPSTHTS
PVVPATTPGTKPDLNASFVSANAEQFYQYQPTEIILSEGRLVDSQGDGVVGVNYYTNSGR
GVTGENGEFSFSWGETISFGIDTFELGSVRGNKSTIALTELGDEVRGANIDQLIHRYSKA
GQNHTRVVPDEVRKVFAEYPNVINEIINLSLSNGATLGEGEQVVNLPNEFIEQFKTGQAK
EIDTAICAKTDGCNEARWFSLTTRNVNDGQIQGVINKLWGVDTNYKSVSKFHVFHDSTNF
YGSTGNARGQAVVNISNAAFPILMARNDKNYWLAFGEKRAWDKNELAYITEAPSIVRPEN
VTRETATFNLPFISLGQVGDGKLMVIGNPHYNSILRCPNGYSWNGGVNKDGQCTLNSDPD
DMKNFMENVLRYLSNDRWLPDAKSSMTVGTNLDTVYFKKHGQVLGNSAPFAFHKDFTGIT
VKPMTSYGNLNPDEVPLLILNGFEYVTQWGSDPYSIPLRADTSKPKLTQQDVTDLIAYMN
KGGSVLIMENVMSNLKEESASGFVRLLDAAGLSMALNKSVVNNDPQGYPDRVRQRRSTPI
WVYERYPAVDGKPPYTIDDTTKEVIWKYQQENKPDDKPKLEVASWQEEVEGKQVTQFAFI
DEADHKTPESLAAAKQRILDAFPGLEVCKDSDYHYEVNCLEYRPGTGVPVTGGMYVPQYT
QLDLGADTAKAMLQAADLGTNIQRLYQHELYFRTNGRQGERLNSVDLERLYQNMSVWLWN
ETKYRYEEGKEDELGFKTFTEFLNCYTNNAYVGTQCSAELKKSLIDNKMIYGEESSKAGM
MNPSYPLNYMEKPLTRLMLGRSWWDLNIKVDVEKYPGAVSEEGQNVTETISLYSNPTKWF
AGNMQSTGLWAPAQKEVTIKSNANVPVTVTVALADDLTGREKHEVALNRPPRVTKTYSLD
ASGTVKFKVPYGGLIYIKGDSKDNESASFTFTGVVKAPFYKDGAWKNDLNSPAPLGELES
DAFVYTAPKKNLNASNYTGGLKQFANDLDTFASSMNDFYGRNEEDGKHRMFTYKNLTGHK
HRFANDVQISIGDAHSGYPVMNSSFSTNSTTLPTTPLNDWLIWHEVGHNAAETPLTVPGA
TEVANNVLALYMQDRYLGKMNRVADDITVAPEYLEESNGQAWARGGAGDRLLMYAQLKEW
AEKNFDIKKWYPEGELPKFFSDREGMKGWNLFQLMHRKARGDDVGDKTFGGKNYCAESNG
NAADTLMLCASWVAQTDLSEFFKKWNPGANAYQLPGASEMSFEGGVSQSAYNTLASLKLP
KPEQGPETINKVTEHKMSVE
NT seq
4563 nt
NT seq
+upstream
nt +downstream
nt
atgaataagaaatttaaatataagaaatcgcttttagcggctattttgagtgcaaccctg
ttagccggttgtgatggcggtggctccggatcttcctccgatacgccgcctgtagattct
ggaacagggtctttgccggaagtgaaacctgatccaacaccaaacccggagccgacgcct
gagccaacgccggacccagaacctacgccggaaccgacacctgatcctgagccaacacca
gaaccggagccagaacctgttcctacgaaaacgggttatctgactctgggcggaagcctg
cgggtaactggtgatatcacctgtaatgatgaatccagcgatggctttacctttacacca
ggcgacaaagtcacctgtgtggcagggaacaacacgacaattgctaccttcgacacccag
tcagaagctgcgcgtagcctgcgtgcggttgaaaaagtgtcgtttagtcttgaggacgcg
caagaactggcgggttccgacaacaagaaaagcaatgcgctctcgctggtcacctccatg
aacagttgcccggcgaatacagaacaggtgtgcctggagttctcctcggtgatcgagagt
aaacgtttcgactcgctgtataagcaaatcgatctggcaccggaagaattcaaaaagctg
gtcaatgaagaggtggaaaacaatgccgcgaccgataaagcgccatccactcatacttca
ccggtcgtgcccgccaccactccgggaacaaaaccggatctaaacgcttccttcgtgtcg
gctaacgcggaacagttttatcagtatcaacccactgaaatcattctctctgaaggtcga
ctggtcgatagtcagggggatggtgttgttggtgtcaactattacaccaattccggccgt
ggtgtaaccggagaaaacggggaattttcctttagttggggggaaaccatctcctttggc
atcgacacttttgagcttggttctgtgcgtggtaacaagtcgactattgcattgactgaa
ctgggtgatgaagttcgcggggcaaatatcgatcagttgattcaccgctattcgaaggct
ggacaaaatcacacgcgtgtagttccggatgaagtgcgcaaggtttttgctgaatatccc
aacgtgattaacgagattatcaatctctcgttatccaatggtgcgacgctgggggaaggt
gagcaagtcgttaatctgcctaacgaatttatcgagcagtttaagacgggtcaggccaaa
gagatcgataccgcgatttgtgcgaaaaccgatggttgtaacgaggctcgctggttctcg
ctgacaacgcgcaatgttaatgacggccagattcagggcgttatcaacaagctgtggggc
gtggatacgaactacaaatctgtcagtaagttccatgtattccatgactctaccaacttc
tatggcagcacgggtaatgcgcgcggtcaggcggtggtgaatatctccaacgcggccttc
ccgattctgatggcgcgtaatgataaaaactactggctggcgtttggcgaaaaacgcgcc
tgggataaaaatgagctggcgtacattactgaagcgccttccattgtgcgaccagagaac
gtgacacgcgaaaccgccaccttcaacctgccgtttatctcgctggggcaagtgggcgat
ggcaagctgatggttatcggtaacccacactacaacagcatcctgcgttgcccgaacggc
tacagctggaacgggggcgttaataaagacggacagtgtacgctcaacagcgacccggat
gacatgaagaacttcatggagaacgtgctgcgctatctgtcaaatgatcgctggttgccg
gatgcaaaatccagtatgaccgtgggtactaacctggacacggtatatttcaaaaaacat
ggtcaggtgctgggaaatagcgcaccgtttgcgttccacaaggatttcactggcatcacg
gtcaaaccaatgaccagctatggcaatctgaatccagatgaagttcctctgttgatcctc
aatggctttgaatacgtcacacaatggggtagcgatccttactccattcctctgcgcgca
gataccagcaaaccgaagctgacccagcaggatgtgaccgatttgatcgcctatatgaac
aaaggtggatcggtgctgatcatggaaaacgtgatgagcaatcttaaggaagagagcgca
tctggctttgtacgtctgcttgatgccgcaggtttgtcgatggcgcttaacaagtcggta
gtaaataacgatccgcaaggctaccctgaccgtgttcgtcaacgacgttcaacgccaatt
tgggtctatgagcgttatccggctgtcgatggtaaaccaccgtataccattgatgacacc
acgaaagaagttatctggaaatatcagcaagaaaacaaacctgatgacaaaccgaagctg
gaagttgccagctggcaggaagaagttgagggtaaacaggtaacccaattcgcctttatt
gatgaagccgaccacaaaacgcctgagtcactggctgcggcaaaacagagaattctggac
gcgttcccagggctggaagtgtgtaaggattctgactatcactatgaggtcaactgtctg
gaataccgcccaggcacgggtgtgccggtaaccggtggcatgtatgttccgcagtatacg
cagctggatcttggagctgacactgcgaaagcgatgctgcaggctgcggatttaggcacc
aatattcagcgcctgtatcagcatgagctttatttccgtaccaatggccgccagggtgag
cgtctcaacagcgtcgatctggaacgtttataccaaaacatgtccgtctggctgtggaac
gagacgaaatatcgttatgaagagggtaaagaagacgagctgggctttaaaacgttcact
gagtttctgaactgctacaccaacaatgcatacgttggcacgcagtgttccgctgagctg
aaaaaatcgctgatcgataacaagatgatttacggtgaagaaagcagcaaagcgggcatg
atgaacccgagctacccgctcaactatatggaaaaaccgctgacacgcctgatgctgggc
cgttcctggtgggatctgaacatcaaagttgatgttgagaagtatccgggagcagtatcg
gaagagggacagaacgttactgaaaccatcagcctgtactcgaatccgaccaaatggttt
gcaggtaacatgcagtcaactggcctgtgggcaccggctcagaaagaggtcaccattaag
tccaatgcgaacgttcctgtgaccgtcaccgtggcgctggctgacgacctgaccggaaga
gagaagcatgaagtcgcgctgaaccgtccgccaagagtaaccaaaacgtactctctggac
gctagtggtacggtgaaattcaaggtgccttacggtggtctgatttatatcaaaggcgac
agcaaagacaatgaatctgccagcttcacctttactggtgtggtaaaagcaccgttctat
aaagacggcgcatggaaaaacgatctgaactcaccggctccgctgggtgagctggaatca
gacgctttcgtttataccgcaccgaagaagaacctgaatgccagcaattacactggcgga
ctgaagcaattcgctaacgatctggatacctttgccagctcgatgaatgatttctacggt
cgtaatgaggaagacggtaagcaccggatgtttacctataaaaacttgacgggccacaag
catcgtttcgccaacgatgtgcagatctccatcggtgatgcgcattcgggttatccggta
atgaacagcagcttctcgacgaacagcaccacgctgccgacgacgccgctgaacgactgg
ctgatctggcacgaagtagggcacaacgccgcagaaacgccgctgactgttccaggcgcg
accgaagtggcgaacaacgtgctggcgctgtacatgcaggatcgttatctcggcaagatg
aaccgtgtcgctgacgatattaccgtcgcaccggaatatctggaggagagcaacggtcag
gcatgggcgcgcggcggtgcgggtgaccgtctgctgatgtacgcgcagctgaaggaatgg
gcagagaaaaactttgatatcaagaaatggtatccagaaggtgaattgccgaagttcttc
agcgatcgtgaagggatgaaaggctggaacctgttccagttgatgcaccgtaaagcgcgc
ggcgatgacgttggtgacaagacctttggtggcaagaattactgtgctgaatccaacggt
aacgctgcggacacgctgatgctgtgtgcctcctgggtcgcccagacggatctttcggag
ttctttaagaaatggaatccgggtgcgaatgcttaccagctgccgggggcgagcgagatg
agcttcgagggcggtgtgagccagtcggcgtacaacacgctggcgtcactcaagctgccg
aaaccggaacagggaccggaaaccattaacaaggttaccgagcataagatgtctgtcgag
taa
DBGET
integrated database retrieval system
