Escherichia coli KO11FL: KO11_12915
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Entry
KO11_12915 CDS
T02104
Symbol
vsr
Name
(GenBank) very short patch repair protein
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
ekf
Escherichia coli KO11FL
Brite
KEGG Orthology (KO) [BR:
ekf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ekf03400
]
KO11_12915 (vsr)
DNA repair and recombination proteins [BR:
ekf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
KO11_12915 (vsr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
Motif
Other DBs
NCBI-ProteinID:
AFH17556
LinkDB
All DBs
Position
2775112..2775582
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AA seq
156 aa
AA seq
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MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV
IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR
GREKLTDEALSERLEEWICGEGASAQIDTQGIHLLA
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgttcacgataaggccactcgcagcaaaaatatgcgcgcgattgccacgcgt
gatacggcgatagagaagcgcctcgccagtctgttaaccgggcagggcctggcgtttcgc
gttcaggacgccagtctgcccggacgcccggattttgtcgttgatgaatatcgctgcgtg
atatttacccacggctgcttctggcatcatcatcactgctatctgtttaaagtgcctgcg
actcgaaccgagttctggctggagaagataggtaaaaatgttgagcgcgatcgccgcgat
atcagtcgcttgcaggaactcggctggcgcgtattgattgtctgggagtgcgcgttacgt
gggcgcgagaagctgacggatgaagcgcttagcgagcgtctggaagagtggatctgcggc
gaaggtgccagcgcgcagatcgacacgcaggggattcatttactcgcttga
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