Escherichia coli KO11FL: KO11_13060
Help
Entry
KO11_13060 CDS
T02104
Symbol
ydcM1
Name
(GenBank) putative IS609 transposase TnpB
KO
K07496
putative transposase
Organism
ekf
Escherichia coli KO11FL
Brite
KEGG Orthology (KO) [BR:
ekf00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
KO11_13060 (ydcM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OrfB_IS605
Cas12f1-like_TNB
HTH_OrfB_IS605
RUBY_RBDX
RuvC_1
Zn_ribbon_IS1595
MitMem_reg
Cys_rich_CPCC
Motif
Other DBs
NCBI-ProteinID:
AFH17584
LinkDB
All DBs
Position
2797005..2798153
Genome browser
AA seq
382 aa
AA seq
DB search
MRRFAGACRFVFNRALARQNENHEAGNKYIPYGKMASWLVEWKNATETQWLKDSPSQPLQ
QSLKDLERAYKNFFQNRAAFPRFKKRGQNDAFRYPQGVKLDQENSRIFLPKLGWMRYRNS
RQVTGVVKNVTVSQSCGKWYISIQTESEVSTPVHPSASMVGLDAGVAKLATLSDGTVFEP
VNSFQKNQKTLARLQRQLSRRVKFSNNWQKQKRKIQRLHSRIANIRRDYLHKVTTTVSKN
HAMIVIEDLKVSNMSKSAAGTVSQPGRNVRAKSGLNRSILDQGWYEMRRQLEYKQLWRGG
QVLAVPPAYTSQRCACCGHTAKENRLSQSKFRCQVCGYTANADVNGARNILAAGHAVLAC
GEMVQSGRSLKQEPTEMIQATA
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgcttcgcaggcgcatgtcgtttcgttttcaatcgtgctctggcacgtcagaat
gagaatcatgaggccggtaataaatacatcccttacgggaaaatggcttcctggctggtt
gagtggaaaaacgccactgaaacgcaatggcttaaagattcgccctcacagccattgcaa
cagtcactgaaagaccttgagcgggcttacaaaaacttcttccagaatcgggctgctttt
ccccgattcaaaaagcggggacagaatgatgcattccgctacccgcagggcgttaagctc
gatcaggaaaacagccgtatttttctgccgaaacttggctggatgcgctaccggaatagc
cgtcaggtcacgggagttgtgaaaaatgtcactgtcagccagtcctgcggtaagtggtac
atcagtattcagacagaaagtgaagtatccactccggttcacccttcagcatcaatggtc
gggctggatgctggcgtggctaaactcgccacgctgtcagatggcacagtctttgagcct
gtaaacagttttcagaaaaaccagaagacgctggcgagacttcagcgacagttaagccgc
agggtcaaattcagcaacaactggcagaagcagaaacgcaaaatacagcgactgcattcc
cgtatcgcaaatatccgcagggactaccttcataaagtcacaacgaccgtcagcaaaaac
cacgcaatgatagtcattgaggatttgaaggtcagcaacatgtcaaagtcagcagcgggt
acggtcagccagccggggcgcaatgtccgggcaaaatcaggtttaaaccgttcgatactg
gatcagggctggtatgaaatgcgccgccagcttgagtacaagcagctctggcgtggcggt
caggtgcttgctgttccgccagcgtacacaagccagcgttgcgcgtgctgtggtcataca
gcgaaagaaaatcgcctgtcacaaagtaaattcagatgccaggtatgtggatatacagcg
aacgccgatgtaaacggcgctcgtaacattttagcggcggggcacgccgttcttgcctgt
ggagagatggtgcagtcaggccgctcgttgaagcaggaacccaccgaaatgattcaggcg
acagcctga
DBGET
integrated database retrieval system
