Escherichia coli KO11FL: KO11_15600
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Entry
KO11_15600 CDS
T02104
Symbol
lsrA
Name
(GenBank) autoinducer 2 ABC transporter ATP-binding protein LsrA
KO
K10558
AI-2 transport system ATP-binding protein
Organism
ekf
Escherichia coli KO11FL
Pathway
ekf02010
ABC transporters
ekf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ekf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
KO11_15600 (lsrA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KO11_15600 (lsrA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ekf02000
]
KO11_15600 (lsrA)
Transporters [BR:
ekf02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
KO11_15600 (lsrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
RsgA_GTPase
AAA_29
AAA_23
MukB
AAA_27
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AFH18089
LinkDB
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Position
complement(3296919..3298454)
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AA seq
511 aa
AA seq
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MQTSDTRALPLLCARSVYKQYSGVNVLKGIDFTLHQGEVHALLGGNGAGKSTLMKIIAGI
TPADSGTLEIGGNNYARLTPVHAHQLGIYLVPQEPLLFPSLSIKENILFGMAKKQLSMQK
MKNLLAALGCQFDLHSLAGSLDVADRQMVEILRGLMRDSRILILDEPTASLTPAETERLF
SRLQELLATGVGIVFISHKLPEIRQIADRISVMRDGTIALSGKTSELSTDDIIQAITPAV
REKSLSASQKLWLELPGNRPQHAAGTPVLTLENLTGEGFRNVSMTLNAGEILGLAGLVGA
GRTELAETLYGLRTLRGGRIMLNGKEINKLSTGERLLRGLVYLPEDRQSSGLNLDASLAW
NVCALTHNLRGFWAKTAKDNATLERYRRALNIKFNQPEQAARTLSGGNQQKILIAKCLEA
SPQALIVDEPTRGVDVSARNDIYQLLRSIAAQNVAVLLISSDLEEIELMADRVYVMHQGE
IAHSALTGRDINVETIMRVAFGDSQRQEVSC
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacgagtgatacccgcgcgttaccgctactttgcgcccgctcggtttataaacag
tattcaggggtcaatgtcctgaaaggcatcgattttacgttgcatcagggggaggtccac
gccctgctcggcggcaatggtgccggtaaatcgacgttaatgaagattattgccggtatt
acccctgctgatagcggtacgctggagattgggggcaacaactacgccagattaacgcca
gttcatgctcatcagctgggcatttatctcgttccccaggaaccgctgcttttcccaagc
ctgtcgataaaagaaaacatcctgtttgggatggcaaaaaaacagctctccatgcaaaaa
atgaagaacttgctggcggcgctgggctgccagtttgatctgcatagtctggcaggatcg
ctggatgtcgccgatcgccaaatggtggaaatcctccgcgggctgatgcgcgactcgcgg
attctgatcctcgatgaacctaccgcctcgcttacccctgcggaaaccgaacgcttgttt
agtcgcttgcaagagctgcttgctactggcgtgggtattgtttttatctcgcataagctg
ccggaaattcgccagattgccgatcgaattagcgtgatgcgcgacggaaccatcgcctta
agcggcaaaaccagcgaactgtctaccgacgacattattcaggccatcaccccagcggta
cgggaaaaatcgctctctgccagccaaaaattatggctggagttacctggtaaccgccca
caacatgctgccggaacgccggtgctgacactggaaaatctgaccggcgaaggtttcagg
aatgtcagcatgacgctcaatgccggagaaattctgggcctggctgggctggtgggggcc
ggacgcacagaactggccgagacgctctatggtctgcgtactttgcgtggcggacgtatt
atgctgaatggtaaagagatcaataaattatccactggagaacgtttactgcgcggtctg
gtttatctgccggaagatcgccagtcatccggactgaatctcgatgcttcgcttgcctgg
aacgtctgcgcccttactcataaccttcgtggattctgggcgaaaaccgcgaaagataat
gccaccctggaacgttatcgtcgggcgctgaatattaaatttaaccaaccggaacaagct
gcacggacattatccggtggcaaccagcaaaaaatcctcattgccaaatgcctggaagct
tcgccgcaagcattgattgtcgatgagccgacgcgcggcgtggatgtctcggcccgtaat
gatatctaccagctgttgcgcagcatcgccgcacaaaatgtggcagtgctgcttatctcc
tccgatctggaagagatcgaactgatggcagatcgcgtgtatgtgatgcatcagggcgaa
attgcccactctgcactgaccgggcgcgatattaatgtcgagactattatgcgcgttgcc
ttcggcgatagtcagcgtcaggaggtgtcatgctga
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