Escherichia coli KO11FL: KO11_16820
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Entry
KO11_16820 CDS
T02104
Symbol
dhaR
Name
(GenBank) DNA-binding transcriptional regulator DhaR
KO
K05880
transcriptional activator for dhaKLM operon
Organism
ekf
Escherichia coli KO11FL
Brite
KEGG Orthology (KO) [BR:
ekf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ekf03000
]
KO11_16820 (dhaR)
Transcription factors [BR:
ekf03000
]
Prokaryotic type
Other transcription factors
Others
KO11_16820 (dhaR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS
HTH_8
PAS_4
GAF
PAS_8
AAA_2
Xre-like-HTH
PAS_7
HTH_17
AAA
AAA_5
AAA_16
AAA_7
HTH_50
ELMO_ARM
Diguanyl_cycl_sensor
Motif
Other DBs
NCBI-ProteinID:
AFH18333
LinkDB
All DBs
Position
complement(3542812..3544731)
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AA seq
639 aa
AA seq
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MSGAFNNDGRGISPLIATSWERCNKLMKRETWNVPHQAQGVTFASIYRRKKAMLTLGQAA
LEDAWEYMAPRECALFILDETACILSRNGDPQTLQQLSALGFNDGTYCAEGIIGTCALSL
AAISGQAVKTMADQHFKQALWNWAFCATPLFDSKGRLTGTIALACPVEQTTAADLPLTLA
IAREVGNLLLTDSLLAETNRHLNQLNALLESMDDGVISWDEQGNLQFINAQAARVLRLDA
TASQGRAITELLTLPAVLQQAIKQAHPLKHVEATFESQHQFIDAVITLKPIIETQGTSFI
LLLHPVEQMRQLMTSQLGKVSHTFAHMPQDDPQTRRLIHFGRQAARSSFPVLLCGEEGVG
KALLSQAIHNESERAAGPYIAVNCELYGDAALAEEFIGGDRTDNENGRLSRLELAHGGTL
FLEKIEYLAVELQSALLQVIKQGVITRLDARRLIPIDVKVIATTTADLAMLVEQNRFSRQ
LYYALHAFEITIPPLRMRRGSIPALVNNKLRSLEKRFSTRLKIDDDALARLVSCAWPGND
FELYSVIENLALSSDNGRIRVSDLPEHLFTEQATDDVSATRLSTSLSFAEVEKEAIINAA
QVTGGRIQEMSALLGIGRTTLWRKMKQHGIDAGQFKRRV
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcgcttttaacaacgatggtcggggcatatctcccttaattgcaacctcctgg
gagcgatgcaataagctgatgaaacgggagacatggaacgtaccacatcaggcccagggc
gtgacatttgcttctatttatcggcgtaagaaagcgatgctgacgctcgggcaggctgcg
ctggaagatgcctgggaatatatggcaccgcgagagtgtgcgctgtttatcctcgatgaa
accgcctgcattctcagccgtaatggcgatccgcaaaccttgcagcagctaagtgcactg
ggattcaatgacggcacgtattgcgccgagggaattattggtacttgtgcactatcgtta
gcggctatctctggtcaggccgtgaaaacgatggccgatcaacatttcaaacaggcactc
tggaactgggccttttgtgcaacgccgttgtttgacagcaagggccgattgacgggaaca
atagcgctggcgtgtccggttgagcaaactaccgcagctgatttgccgttgacgttagca
atcgcccgcgaggtcggtaatttgctgctgacggacagtttgctcgctgaaactaaccgt
catttaaatcaacttaatgccctgttagaaagtatggatgatggcgtgattagctgggac
gagcagggtaatttgcaatttattaatgcccaggcggcgcgggtcttgcgccttgacgcg
acggcaagtcagggaagggcaatcactgaactcttaacgttacccgccgtattgcaacaa
gcaataaaacaggcacatccgctcaaacacgtagaagcaacctttgaaagtcagcaccag
tttattgatgcggtgataacccttaaaccgataatagaaacgcagggaaccagttttatt
ttgttgctccatcctgtggaacagatgcggcagttgatgaccagtcaattaggaaaagtc
agccataccttcgctcatatgccacaggacgatccgcaaacccgccgcttgattcatttt
ggtcgccaggcggcgcgcagtagctttcctgtcctgctttgtggagaagagggcgtgggc
aaggcactgctaagtcaggcaattcataatgaaagcgagcgtgctgcaggtccttatatc
gccgtcaattgtgagttatatggtgatgcggcactggcggaagaatttattggtggcgat
cgcacggacaatgaaaatggccgtctgagtcggctggaactggcgcacggcggcacgctg
tttcttgaaaagattgaatatctggcggtggagttacagtctgctttgcttcaggttatc
aagcagggtgttatcacgcgactggatgcgcggcgcttaataccaattgatgtcaaagtg
attgccacaacgaccgcggacctcgcaatgctggtggaacaaaatcgttttagtcgccag
ctgtattacgcgttgcatgcatttgaaattaccatcccgcctctgcgtatgcggcgtggc
agcattccggcgctggtgaataacaaattacgcagtcttgaaaaacgcttctctacgcgg
ctgaaaattgatgacgatgccctcgctcgcctggtttcctgtgcatggcctggcaacgat
tttgaactttacagcgtcatcgagaatcttgctctgagtagtgataatgggcgcattcgc
gtcagtgatttgccggaacatctgtttaccgagcaggcaacagatgatgtcagcgccaca
cgcctttccaccagtctgtcatttgcggaagttgaaaaagaggcaattattaacgcagcc
caggtcacaggcggtcgcattcaggaaatgtcggctttacttgggatcggccgcactacg
ctgtggcggaaaatgaagcaacatggcattgatgcagggcagtttaagcgccgggtatga
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