Eutypa lata: UCREL1_10211
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Entry
UCREL1_10211 CDS
T03103
Name
(GenBank) putative u6 snrna-associated sm-like protein lsm6 protein
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
ela
Eutypa lata
Pathway
ela03018
RNA degradation
ela03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ela00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
UCREL1_10211
09123 Folding, sorting and degradation
03018 RNA degradation
UCREL1_10211
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ela03019
]
UCREL1_10211
03041 Spliceosome [BR:
ela03041
]
UCREL1_10211
Messenger RNA biogenesis [BR:
ela03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
UCREL1_10211
mRNA degradation factors
5'-3' decay
Lsm complex
UCREL1_10211
Spliceosome [BR:
ela03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
UCREL1_10211
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
LSM14
Hfq
Motif
Other DBs
NCBI-ProteinID:
EMR62844
UniProt:
M7S9L7
LinkDB
All DBs
Position
Unknown
AA seq
84 aa
AA seq
DB search
MENGTTAAAQGEGKDPSGFLSEIIGNPVTVKLNSGVIYKGELQSVDGYMNIALEKTEEFV
NGVKRRTYGDAFVRGNNVMYISAD
NT seq
255 nt
NT seq
+upstream
nt +downstream
nt
atggagaacggaactacggcggctgcccaaggcgaaggaaaggacccctcgggtttcctg
agtgagattatcggcaaccccgtcaccgtgaagctgaactcgggagttatctacaaaggg
gaactccaatctgtcgatgggtacatgaacatcgccctagagaagaccgaagagttcgtg
aacggtgtcaagcggagaacctacggggatgccttcgtgagaggcaacaacgtcatgtac
atctcagcagactga
DBGET
integrated database retrieval system
