Eutypa lata: UCREL1_10575
Help
Entry
UCREL1_10575 CDS
T03103
Name
(GenBank) putative nucleoporin sonb protein
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
ela
Eutypa lata
Pathway
ela03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ela00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
UCREL1_10575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ela03019
]
UCREL1_10575
03036 Chromosome and associated proteins [BR:
ela03036
]
UCREL1_10575
Messenger RNA biogenesis [BR:
ela03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
UCREL1_10575
Chromosome and associated proteins [BR:
ela03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
UCREL1_10575
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nucleoporin_FG
Motif
Other DBs
NCBI-ProteinID:
EMR62514
UniProt:
M7S8Q7
LinkDB
All DBs
Position
Unknown
AA seq
1961 aa
AA seq
DB search
MSFGGFGGGSAFGGGGNTNNNSTFGGFGGNNNNTPAGGFGSNANNATPGFGASNTSGGSL
FGSGTPAFGSGSNTGFGTTGNSAFGAAKPAFGGTSTSTGGGGLFGGATTATSGTGFGGGF
GATNNTASTSSPFGGGTTGGLFGSTAPSKPAFGAATPNTGGSMFGGNSTTPNTTGGFGFG
GASNASSSTALGGPIGDPPGTANVTNFQPFVEKESTTSNAQNSFQNILFQDPYKKWSGEE
LRLVDYAQGRRFGGTPGGAFGAGSGFGSFGGATNTSNQPSNAFGTTTTPANTGGSMFGGG
NTSFGQNNTNTGTGAFGSGGGGLFNQNKPAATTGTGLFGGATPASQPAQGGGMFGSTGGS
GFGTNATSGFGGANANTGGSVFGTNNNNQNKPGFSFGTSNTNNTGTGFGAGTTGFGTANT
NTGGGLFGNNANNTPAQPAGGMFGSSTPQQNTSSPFGGGSGFGAQNQQSGSSLFGNNQQK
PAATGMFGGSATGGTGAFGSSTNTSNPFGQQQNTNQAGGGMFGNKPATGTTGLFGSSGAT
QNTNTGNGLFGGLGQNNQNQQQQPQQPGGGLFGSLGQNQQKPSMFGQSTQPAGGSLFNNQ
NNPQQGSMWGGSTMQQQQPQNTMGNSLFGNSQANQGTPQALTASVNDPSAYGTSLFGNLG
NGEVVNPGPLATPVGRRQPKRASVLPIYKLNPASASRYATPQKRGYGLSYSTYGTPNSPS
SVASTPGTMSQSLLGGSLTRSLSKSISTNSLRRNFNTEDSLLNPGAFSSSTGSRLYGNNS
VKKLVINRDLRPDLFSTPTKDKSPYDTPNGSSKLRKRVSFDTSNVDTIENGDASNESNNN
TPSSAEELGYIRPSRSANGANGAAPNSSSMVEPEQVKGNELAVVHEEEVASPPVKNSADG
PEDTEPGDYWMEPSRDTIMDMNRVQRQKVIDFTVGRVNVGQVKFKIPVDLTSIDLDNLTD
DIVILEPRTATVYPHAAKKPPVGKGLNVPAQILLQNAWPRGTKNKGAPSVAKHIKRLQRI
EGTQFENYNPETGEWTFSVEHFTTYGLDDSEDEDGVTIEPGASAGLPLAYAAKRDNHVSE
PLQTSDREDASPNNGVGSRPTYRSLPGAFDAEEQYESDGSQEMAETNGNELSFLANRSAG
STSRALVPVDKEESDDEYAMFEANDNASPSLEQHLAVEQEDNSPDASQIDLVQETPAGIM
RARMRAIKGAETPMKVQVTAGDDWTDMLTKTISPAKRDRALLKSLREADKYRMVDETAQD
RSPAKRRVVSDSRGFATSIDLMNSLFEKAKMPAENLQSSIRPKGVKWPYKRTTKHLDDSQ
MDPQDRVWHDTMRPTWGPNGTLVFAANPSEAAFGRSGRVTERNGLMMVMKGGVVSESQDI
RIAKFTNEMAAKAIDTQATLTQVELVDNVPAAKLNPRTSLRDFSVGASSKNSAEEHERLV
WDLASVLFDHIKIPTDMHDDPDALQKLRRDNLSHFWEHMVDEQTSKAVAMAGSNEEKALA
ALSGHRIAEACKYLLDGKDFRLATLVALIGTSDEGKRDMREQVKEWQDAGVLSEFSQSIR
ALYEMLSGNVCVCEGMKGAIENRMDSFVISHRFGFNWQQALGLRLWYASSTESSITDAVQ
RYREDIEQDKELPPKPWFIENGIKGIWNDSNQDQRQDLLWGLLRLYSEEDVDLEAILRPE
NSQLSPLDYRLCWQLGQALTATDKVSFGERAVEKADAATISFAAQLTNEGSWLEATFVLL
HLTDPAARSKAIEDHLCRHAGHIGAEDSTSFRKLAGDFKIPTQWIWHAKALFMRSVKKDP
TAEVQSLLRAQSYADAHRTFIKEVAPLAIIERDYDALADVLQQFEGRQSQVSDWNIGGEI
YKAFLQLTGYDRRREPPPTTLVNNLLDGLPAMHGNAPGAGIIEYAALTEMASEVAKVVAS
MAKAGQMEHERILHLPLTEDVLLRHSRDLAWSHYTSVMAGH
NT seq
5886 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcggcggctttggtggtggtagcgcctttggcggtggaggcaacaccaacaac
aatagtacctttggtggtttcggcgggaacaataataatactccagcaggcggctttggt
tctaacgccaataatgcgacgcccggctttggcgcctccaatacctctggaggtagtctt
ttcggcagcgggaccccggcattcggcagtggtagcaacacaggttttgggacaacaggt
aatagtgccttcggcgccgcgaagcctgctttcggtggcacgtctacgagtaccggcggc
ggcggcttattcggtggtgccacgactgcgacttccggaactgggtttggaggtggcttt
ggcgcgaccaacaatactgcatctacttcgagtcctttcggtggaggcaccaccggcggc
ctcttcggatcgactgcccctagtaagcctgcttttggagccgctacacctaacactggt
ggcagtatgttcggtggcaacagcaccacccccaacacgacaggaggctttggattcggc
ggcgcatcgaacgcctcgagtagtactgccctgggtggccctatcggtgaccctccgggc
actgccaatgtcaccaacttccaaccatttgtagaaaaggagtcgaccactagcaacgcg
cagaactccttccaaaacattctcttccaggatccttataagaagtggtctggagaggag
ttgcgccttgtcgattacgctcaaggccgccgctttggtggtacgcccgggggtgctttt
ggagctggctctggcttcggcagctttggtggcgccacaaacaccagcaaccaaccttct
aatgcttttggaacaaccaccacgcccgccaacacgggtggtagtatgttcggtggtggt
aacacgtcgtttggccagaacaacaccaacaccggcacgggcgcctttgggtcgggtggt
ggtggcttgttcaaccaaaacaagccagcagcaaccactggcaccggtctcttcggcggt
gccacaccggcctcgcagcctgcccaaggaggtggtatgtttggttccacagggggaagc
ggctttggcaccaacgctacaagcggttttggaggtgcaaatgccaacacgggaggctcg
gtttttggaaccaataacaacaaccaaaataaaccaggtttcagttttggcacgtcgaat
accaacaacacgggcacagggtttggagccggcacaactggttttggaactgccaatact
aacactggaggtggtcttttcggcaacaatgccaacaacactccagcccaacctgctggg
gggatgtttggcagcagcacccctcagcagaatacaagcagccccttcggtggtggttcc
ggatttggtgcacagaaccaacagagtggctctagtttattcggtaataaccagcaaaag
cccgcagccaccggtatgtttggaggtagtgctactggaggcactggtgcgtttggatcg
tctaccaacacgtcgaatccgttcggccagcagcagaataccaatcaagctggaggaggt
atgttcggcaacaagcccgcgacgggtaccactggcctcttcggttcttccggtgcaact
cagaacaccaacaccggtaacggtttatttggcggcttagggcagaacaaccagaaccaa
cagcagcagccacaacaaccaggcggtggcctattcggttccctgggtcaaaaccagcag
aagccatctatgtttgggcagagtactcagccagctggcggtagcctctttaacaatcag
aacaacccgcagcagggctcaatgtggggaggctctaccatgcagcagcaacagccgcag
aatactatgggaaactctctattcggaaattcacaagctaaccagggcacaccccaagca
ctgaccgcgagtgtcaacgacccttctgcgtatggaacctctttattcggtaacttggga
aatggtgaggtggttaacccaggaccccttgccacgcccgtcggtaggagacaacctaag
cgggcctcggttttgccaatatataaactcaacccagcctcagcctcacgctacgccaca
ccgcagaagcgaggatatggtctgtcgtatagcacgtacggaacgccgaacagcccctca
agcgtggctagcacacctggcaccatgtctcaaagtctactaggcggtagtttaacacgt
agccttagcaagagcatctcgacaaacagccttcgacgcaacttcaatacggaagatagt
ttgttgaaccctggtgccttctcctctagcactggctcgagactttatggaaacaacagc
gtcaagaaactggttattaaccgggatcttcgaccggatctgttttcgacacccaccaag
gacaagtcgccatatgacactcccaatgggtctagcaagttgaggaagcgcgttagcttt
gatacaagcaacgtcgacacaatcgagaatggcgatgcgtcaaacgaatctaacaacaat
acgccttcgagcgccgaggaacttggctacattaggcccagtcgaagtgctaacggtgcc
aatggggctgcacccaactcgtcatccatggttgagccagagcaggtgaagggcaatgag
cttgctgtcgtgcacgaggaagaggttgcatccccgcccgtcaagaactctgccgatggt
ccagaggatactgagccaggtgactactggatggaaccaagtagggatacgatcatggac
atgaaccgagttcaacgccagaaggttattgatttcaccgttggtcgtgttaatgttggc
caggtgaaattcaagattccggtagacttgacctccattgacctggataacctgaccgat
gatatcgtcatactggaacctcggaccgcaaccgtttatccgcatgccgcaaagaaacct
ccagtcggtaaagggctgaatgtacccgcacaaatccttcttcaaaacgcgtggcctaga
ggcacaaagaacaagggagcaccatctgttgcaaagcacattaagcgactgcagagaatt
gagggaactcagtttgaaaactacaaccccgagacgggtgaatggactttctctgtagag
cattttactacctacggccttgatgattctgaggatgaagatggtgtcacgatcgaaccc
ggagcatctgcaggtcttcctttggcctatgctgctaaacgcgacaaccacgtttccgaa
ccccttcagactagtgaccgcgaggacgccagtcctaacaacggtgtgggttctcggccg
acctatcggtcactacctggagcttttgacgccgaagagcaatacgaaagtgacgggtcc
caggaaatggcagagacaaacggtaacgagttgtcttttttagctaatcgctccgcgggt
tctacgtctagagctcttgttccagtggacaaagaggaatcggacgatgaatatgcgatg
ttcgaggcgaacgacaatgcgagtccttcccttgagcaacatctcgccgtggagcaggaa
gataactcgcccgatgccagtcagatagatctcgtgcaagagacccctgctggtatcatg
agagccaggatgcgtgccattaagggtgctgaaaccccgatgaaggtacaagtcacggct
ggtgatgactggacagacatgctcaccaagacaattagcccagctaagcgggatcgagcg
ctcttgaaaagcctacgcgaagcagacaagtaccgcatggtggatgagacggcgcaagat
agatcaccagcgaaaagacgtgttgtttccgatagccggggtttcgcaacaagcatcgac
ctgatgaattccttatttgagaaggcgaagatgccggccgagaatttgcagtcttctatc
cggccaaaaggtgtaaagtggccttataaacgcaccacaaagcacctggatgacagccag
atggatcctcaggatcgagtttggcacgacaccatgcgacctacatggggccctaacgga
actctcgtttttgctgctaaccccagcgaagcggcttttgggaggtcgggccgtgtaaca
gagaggaatggacttatgatggtaatgaaaggaggcgtggtatccgaatctcaagatata
cggattgctaagtttacgaatgagatggctgcaaaagctattgatacgcaagcgacattg
acccaagttgagcttgttgacaatgtgccagcggccaagttgaaccctaggacgagtctt
cgggacttctctgttggcgccagcagtaaaaactctgccgaagagcatgagaggctcgtt
tgggatttagctagtgtgttatttgaccatatcaagatccctacagacatgcacgacgac
cccgacgccctgcagaagctccgtcgggataacctatctcatttctgggaacacatggtg
gacgaacaaactagcaaggctgttgcgatggcaggatcaaatgaagagaaagcgttagct
gccttgtctggtcatcgaatcgctgaggcttgcaaatacttacttgacgggaaggatttt
cgtcttgccacccttgtagccttgattggcactagtgatgagggcaagagagatatgcga
gagcaagtcaaggaatggcaggatgcgggcgtgctttctgaattttcccaatccatccga
gctctatacgagatgctcagcggcaacgtctgtgtctgcgaaggcatgaaaggggctata
gagaatcgcatggattcgttcgtcatttcacaccgattcggttttaactggcaacaagcc
ctaggattgagactttggtatgcatcctctacggagagcagcattacggacgctgtacaa
aggtatagagaagatatcgagcaggacaaagaactccccccgaagccatggttcatcgag
aacggcatcaagggcatctggaatgactcaaatcaggaccagcggcaagatctactttgg
ggactattgcgattgtactcggaggaagacgttgacctagaagccattttgcgaccggag
aattctcagctctcaccgctcgattaccgcctctgttggcagctcggacaggccttgacg
gctaccgacaaagtatcgttcggagagagggccgtggagaaggcagacgctgccacgatc
tctttcgctgcgcaattgacgaatgaagggagctggcttgaagcgacgtttgtcctgcta
cacctcacggatcccgccgcacgctcaaaggccattgaggaccacctctgccgacatgcc
ggccacattggtgctgaggactcgacaagtttcagaaaactcgccggggacttcaaaatc
ccaacccagtggatttggcatgcaaaggctctctttatgcgcagtgtcaagaaggatccc
acagcagaggttcagtctctcctacgtgctcaatcgtatgccgatgctcatcgcactttc
atcaaggaagttgcgccactcgcaatcatcgaacgagattatgacgcccttgccgatgtg
ctccagcagttcgaaggacgacagtcccaagtgtccgactggaatattggtggtgaaatc
tacaaagccttcctccaactgacggggtacgatagacgccgtgaaccacctcctacgact
ctcgtgaataacttgctagacggcttgcccgcaatgcatgggaacgcacccggggccggg
atcatcgagtatgcggcattgactgaaatggcgtctgaggtcgctaaggtggtagctagc
atggcaaaggccggacagatggaacacgagcgtattctacaccttcccttgacggaagat
gtcttgctaagacattcgcgcgatctcgcctggtcccactacacgagcgtcatggccggc
cactag
DBGET
integrated database retrieval system
