Eutypa lata: UCREL1_10802
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Entry
UCREL1_10802 CDS
T03103
Name
(GenBank) putative 3 exoribonuclease family protein
KO
K12589
exosome complex component RRP42
Organism
ela
Eutypa lata
Pathway
ela03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ela00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UCREL1_10802
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ela03019
]
UCREL1_10802
Messenger RNA biogenesis [BR:
ela03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
UCREL1_10802
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
UCREL1_10802
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIA
Spt20_SEP
FAM171A1-2-B_C
eIF3h_C
FAM101
RNase_PH_C
Ilar_coat
Androgen_recep
Hydin_ADK
TERB2
OATP
Motif
Other DBs
NCBI-ProteinID:
EMR62264
UniProt:
M7S826
LinkDB
All DBs
Position
Unknown
AA seq
306 aa
AA seq
DB search
MTVEIPGYRDDDSSTIFLATMLGEALLADGEFTKKLWINRRFHWKLYLDIILISPPLSYP
LPLLSLTTHLALLSTRLPRLKSEADEDPMFDDDWAASTFIYPRQQQQQQQQQQQQQQQQK
QQQQKQKQKSTSPSPLPSPPVSRPPITLLVISVGDNIIFDPSKEELAVADSALAVSVGEV
DASVNATADDTLDMDIDVETKQEAAAGTGARNLRLLAVRTIDPPSRLTAPGVPNAVNAAA
WGHSGVAQPAKDPGARTAETDDVEGVWKAPRGGTKIGVLSAMVQKVLEKGGVADEVLEGL
EGVELG
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgacggtcgagatccccgggtaccgagacgacgactcgagcacgatattcctggctacg
atgctgggcgaggcgctgctggcggatggcgagtttaccaagaagttgtggatcaaccgg
cggttccattggaagctctacttagacattatcctcatttccccaccactatcctacccc
ctcccgctcctgagcttaaccacccacctcgccctcctatccacgcgcctcccgaggctg
aaatccgaagcggacgaggaccccatgttcgacgacgactgggcggcctcgacctttatc
tacccgcgacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacagaaa
caacaacaacagaaacagaaacagaaatctacctctccatctccacttccatctccaccc
gtctcgcggccacccatcacactactcgtcatatccgtaggcgacaacatcatcttcgac
ccatccaaggaggagctagcggtagcggactcggcgctcgccgtatccgttggcgaagtc
gatgctagcgtcaacgccacagccgacgacaccttggacatggacatagacgtagagacg
aaacaggaggcagcagcggggacgggggctaggaacctacggttactcgccgtacgaacg
atcgatccgccgtcgcgactaacggcgcccggcgtgcccaacgccgtcaacgcggcggcg
tggggccacagcggcgtcgcgcagccggccaaggacccgggcgcgaggacggccgagacg
gacgacgtcgagggcgtgtggaaggcgccgcggggcgggacgaagatcggcgtgctgagc
gctatggtgcagaaagtgctggagaaggggggtgtggcggacgaggtgctggagggtctg
gaaggtgtcgagttgggatag
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