Eutypa lata: UCREL1_11260
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Entry
UCREL1_11260 CDS
T03103
Name
(GenBank) putative nonsense-mediated mrna decay factor protein
KO
K14327
regulator of nonsense transcripts 2
Organism
ela
Eutypa lata
Pathway
ela03013
Nucleocytoplasmic transport
ela03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ela00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
UCREL1_11260
03015 mRNA surveillance pathway
UCREL1_11260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ela03019
]
UCREL1_11260
Messenger RNA biogenesis [BR:
ela03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
UCREL1_11260
mRNA cycle factors
P-body specific factors
UCREL1_11260
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
CBP4
Motif
Other DBs
NCBI-ProteinID:
EMR61807
UniProt:
M7SCC2
LinkDB
All DBs
Position
Unknown
AA seq
1087 aa
AA seq
DB search
MDRSRRRELLALNQRAWDGETDVFPVNSSLDSSLKKNTAFIKRLRTVITSSTLNTFLQEI
RTLSLLKYLSEIISACYEGLTRLKTTGEIEAAVEIVSALHQRFGPEEFTEYLGWLLGKGM
ATPDKSLLKSLAPEVREKEEKERLVRQRALLRVITELWLLGVLRTLDDVKPDDATRGVSG
KNAELKIKSTSSTKGGGAEPFPLEVLKDLLGHDRDHVNLPLLVIFVKSFSWDILGVKSAG
SDGRKTVEEDGATRSTEDRIDNEGQSSETGVLDPDDLPFATPEMQERFRNILKRYFEDVK
AHILRDQKNILTQKGRNSEAYVKSGEVFEDRQANFERLLKAQERLVGNAQVIAEAIGVEM
PDLKEAGDGLSTSNGSIGLVKTGEYLRGQSDGAGIWEDEDERRFYENLVDLKGKVPGMLL
EDGKKKKADTDEQVGKRIDTPESIETPKPSESIDEQSMAIANKTIGAQVDAILARLPELT
NKDAIDEIAIDFCFLNSKASRNRLIKALTEVPKGRTDLLPFWSRLVATLGRYMADVPKGV
VEYLDAEFRSLQRRKDKDFLGQVRLSNIRYLAELTKFGVVPEHHIGQPERMLIENAIYYV
DPPERASIQQKERTPTELFIRKLIYVDLTKRNYTKILKQIRRLHWEEPEVVAIITKVFSK
PGKVKYGSIHILAILLSAIYRYHPDFAVTVIDNVIESINFGLEQNDFKFNQRRIAEVKYL
GELYNYRMLEHPVIFDTMYKVMTFGHDDYFRIRLTATVLETCGMFFNRGAAGKKLDYFLS
FLQHPLPMDIEFIVQDTFSLTRPQWKLATNLEEASKAFQLAITQDQKNAGLDKSTEQDDA
SSDASSDDDGAEGDGDMILPEAEGDEEEIDSEDEDIENDHNGDSQPQSPQGFESEDEAIV
VTRKTEEVDPEDEEDFEREYAKMMAESLESRKFDRKPLFDVPLPTRTVALPSDSTFAIAM
KTQQQAEREEQQRIKNLVLNYDLRHEKPPYHPNRLEKSGKERSGQRVRRLQLSDVDWYGK
TRERKEPSENASITKAEPVGRVRLNEAAVRVEESASQPTKESALNKRFVNSADCRSRSAN
RKNRTGG
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atggaccgctcacggagacgtgagctactggcgctcaaccaacgcgcttgggacggcgaa
accgacgtctttcctgtcaactcttcactcgactcttctctcaagaagaatactgctttt
attaaaaggctccgaaccgttatcacatcttcgaccctgaatactttcctgcaagaaatc
cgaaccctcagccttctcaaatacctctccgaaatcatctccgcatgctacgaaggcctg
accagactgaaaaccaccggggagattgaagcggccgtcgagattgtcagcgcattacac
caacgatttgggccggaagaatttacagaatatctaggatggctactaggcaagggcatg
gcaacgcccgacaagagtctgctgaagtctctagcccccgaggttcgtgaaaaggaggag
aaggaacgactagtacgacaacgagcactcctacgagtcatcaccgaactgtggcttcta
ggtgttttgaggactctcgatgatgtcaaaccggatgatgcaacacgcggcgtaagcgga
aagaatgctgagctaaagatcaaatcgactagttctaccaagggtggtggtgccgagcca
ttccctcttgaggttctgaaggatcttttaggtcacgatcgggatcacgttaatctgccc
ttacttgtcatctttgtgaagtcatttagctgggatattttaggtgtgaaatctgctgga
tccgatggtcgcaaaacggttgaggaagacggcgccacaaggtctaccgaggatcgcatc
gacaatgaaggtcaatccagcgaaactggtgtgttggacccggatgatctcccatttgct
actcctgagatgcaggagcgattcaggaatatcctaaagcgatactttgaggacgtaaag
gcccatatactacgagaccagaagaatatcctcacacagaaaggccggaattctgaagct
tatgtcaaatctggtgaggtttttgaagatcgtcaggccaacttcgagcggctattgaag
gcccaagaacgtttagttgggaatgctcaggtgatagccgaggccattggggtcgaaatg
cctgatctcaaggaagctggagatggtctttctacttctaatggctctattggtcttgtc
aagacaggcgaatacctacgagggcagagcgatggtgccggcatttgggaagacgaggat
gaacgacgcttctacgaaaacctagtagatctgaagggtaaagtacccggcatgctcctt
gaggacggcaagaaaaagaaagcagatacagacgaacaggttggcaagagaatcgacaca
ccggagagtatagagactcctaagccttcagaatctatcgatgagcagtctatggcaata
gccaataaaaccattggcgcacaggtggatgccatcttagctcgactgcctgagcttacg
aacaaggacgcgattgatgaaattgctattgatttctgtttcctgaattcaaaggcctcc
cgcaatcgacttattaaggccttgactgaggttccgaaaggccgtacagatctacttcca
ttttggtcacgtcttgtagccactctgggcagatatatggcagacgttcccaaaggtgtt
gtcgaatacctcgatgcggaattccgcagcctccagcgtcgcaaggacaaggattttctg
ggccaagttcgcctcagcaatattcggtaccttgctgaactgacaaagtttggcgtggtg
ccggaacaccacattggtcagccagagcgtatgcttatcgagaacgccatctactacgta
gatccgcccgagagagcttcgattcagcagaaagaaaggacccctaccgagctcttcatt
cgtaagctcatttatgtagatttgaccaaacgaaactacacaaagatccttaagcagatt
cgcagacttcattgggaagagccagaggttgtagctattatcaccaaggtattttcgaaa
cctggtaaagttaagtacggtagtatccacatcctcgccatcctcttgagcgccatatat
cgctaccacccggactttgccgttacggtgatcgataacgtcatcgagtcgatcaacttt
ggtctggaacagaatgatttcaagttcaaccagagacgcattgcagaagtcaagtattta
ggagagctctacaattaccgaatgcttgaacatcccgtcatttttgacaccatgtacaag
gtcatgactttcggacatgacgattatttccgcattcgcctaactgctacagttctcgag
acctgcgggatgttcttcaatagaggtgctgcaggaaagaagcttgactactttctctcc
tttctccagcatcccctccctatggatatcgagttcattgtccaggataccttctccctc
accagaccgcagtggaagctagcgactaatttagaggaggcttctaaagctttccagctt
gcaatcacgcaagatcaaaagaatgcaggactagataaaagcactgaacaagatgacgct
tctagtgacgcatcatctgacgacgatggcgccgagggtgatggcgatatgatactgccc
gaagctgagggggacgaggaagaaatcgattcggaagacgaagatatcgaaaatgatcat
aatggcgacagtcaacctcagtcccctcagggatttgaatcagaagacgaggccattgta
gttaccaggaaaactgaagaagtcgacccggaagatgaagaagacttcgaacgagaatat
gctaagatgatggcggagagcttagagtcccggaaatttgaccgaaaacctcttttcgac
gttcccttaccgacccgcactgtggcccttccttccgactcaacgttcgccattgctatg
aagacgcagcagcaagcagaacgagaggagcagcaacgtatcaaaaacttggtactcaac
tatgatcttcgtcacgagaagccaccgtatcatcccaatcgcctggagaagtcaggcaaa
gaacgtagcgggcagcgtgtccgccgattgcaactcagcgatgttgactggtatggcaag
acccgcgagagaaaagaaccctcagaaaatgcgtcaattaccaaagctgaacctgtcggc
cgtgtgcggcttaatgaggctgctgtgcgggttgaagaatctgcatcccagccaaccaaa
gagagtgcactaaacaagcgtttcgtaaactctgcagattgtcgatctcgatcggccaac
cgcaaaaaccgcacagggggctaa
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