Eutypa lata: UCREL1_11566
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Entry
UCREL1_11566 CDS
T03103
Name
(GenBank) putative u3 small nucleolar rna-associated protein 10 protein
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
ela
Eutypa lata
Pathway
ela03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ela00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
UCREL1_11566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ela03009
]
UCREL1_11566
Ribosome biogenesis [BR:
ela03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
UCREL1_11566
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BP28CT
U3snoRNP10
HEAT_HEATR1
HEAT
Motif
Other DBs
NCBI-ProteinID:
EMR61509
UniProt:
M7S607
LinkDB
All DBs
Position
Unknown
AA seq
1539 aa
AA seq
DB search
MTTALAAQLAQIAASSKSSLDVKAQKAAHSKSLIFEPRVAASQNYQTLYSICHEGFEDLC
SLDPRFVYFGKTIFSEQSQNEDRTQMTAAENAELDKKVESFLRLVGARLRLLPAIKAIEW
LVRRFRLLQVTATLSCFDIFLGWDYDRIGPILSDALVLDKAPDLQIACYMVLAVFVAKGD
LEDSAISALMEQLVTGWSTDSLRPGLVCLSILAHYRSAKQLSGRVTRALLKVQGLPHLLV
DIGKDHNTGKLANGLCLALVDRLSKKGDAKGLPVVESILSQQVLNEQQTAVLFKSLLLVA
HKIDDQVDPQGVVRKVLASTIIGLTRTETNARGIFTKVIADTDVDVDALELRLDAEIRPR
TIASHLQDDVVMKDDENELPDSEDFSTALQRVSALQTKSTDSCLQSLRSDVFVDLCAVYI
SSLSRPEDVASFKQMAPLHQDQANSTPYYFTFFMRVWSGPYPTLARVGALEMAKDRLKQG
DCEGIDFQAAIPYCIIALNDASRKVRRAAADLVAVIGNLLEQFDGKSENYVRWGHDRMYD
DMKSVEWMSSEVSRKFTRTILVPSLEDPASSEAADLLKNVELNTDILSFFLESLQPTAKM
ATEPSPNKRRRTSSSEAHRGISTQATPELASALKQVTFVLQLVEGSNPESHPQLLNALFN
TLSELQHFRALVGSELGYLQNLVLRSLLAMVPAYKNSKELKIDGSGGHGDLLVNCIQKSS
SPAVQSSALLLVASLANVAPELILHSVMPIFTFMGSSVLRQSDDYSAHVINQTVKEVVPP
LIKSLLKGKKDPVAGASELLLSFVTAYEHIPSHRRLGLFISLVETLDPEKFLFAVLAMLA
DKYGMTDQVLSFSTELFNHFNIETQLQSLVSILSLITDIFKPRPCLSSVLLGTNEDGDRD
PQKIALRQLNLLPHILSSRKLRIQISKLAERDDMEASKVRELYSTLLENLLGLADSLKSH
KSLYSRCGDAVSKLLNLLSIVEFIKAVETLLDRPDPILRRKVLRAVELRIDQESQGDANS
RTALLAFLPQLTAIIRVSDDTLYKHIAVSCVDRIAEKYGKKDPEAVTAAAATIAGNQCLG
QDDDRLRVMALLCLASLVDVLQDGVVPVLPSAIPKTLAYITESLRASNPHGELHNAGYAF
MTALAQYLPYILSGSYLQQLLTVSSMSAKANLNTEANNARLQCLNFLAKQIDAKVMFSAL
EQNWSTASSSGFSATREYLDTLGLTIDKHKKNVIEKNVTSLSAIFLNVFDLRRQERIKAV
SGTEPMKNINRIEELVNGVALKMIYKLNDAAFRPIFIRLMEWASTGLSKKDAAGTTLRQL
SVFSFLLSFFDALKSIVTSYASYMIDAAVGILNSTISGTNSKGFSSPEEKELWRKVLHTL
TKCFEHDQDDFWQAPAHFDAVAPALIGQFSLLAASASSSSSEAPSSSSTATAELVAQDLV
PAIVELAHAADSNEHQKSLNGQLLKHLRSEHAAVRLAAVRCEQGLTTRLGEEWLSMLPEM
LPYISELQEDDDEDVERETHRWIVGIEGVLGESLDAMLQ
NT seq
4620 nt
NT seq
+upstream
nt +downstream
nt
atgacgacggccttagctgcgcagctggcgcagattgctgcgagttcgaaatcgtccctc
gatgtgaaggcgcaaaaggccgcccattcgaaatctttaatattcgagccccgagttgcc
gcgtcgcagaactatcaaaccctttacagcatttgtcatgaaggcttcgaagacttgtgt
agtctagatcctcgcttcgtctacttcggcaagacgatattcagcgagcagagtcagaat
gaagaccgaactcagatgactgcagctgaaaatgcggaacttgacaagaaggttgaatcg
tttctccgtttagttggcgcgcggttgaggttactaccagcgataaaggcgatcgagtgg
cttgtgcgaagattcagactgctccaagtcacagcaacactatcctgctttgatatcttt
ctggggtgggattatgacagaatcgggcccatcctaagcgatgccttagtcttggataag
gctcctgatttgcaaattgcctgttacatggtgctagctgtctttgttgccaaaggtgac
ttggaggatagtgcaattagtgccttaatggagcaactcgttaccggctggtctaccgat
tccttgcgccccggcctcgtgtgtctctctatactggcccactatcggtcagcaaagcaa
ttatctggcagagttacgagagccctactcaaagttcagggtcttccccatcttctagtg
gacatcggaaaagatcataatacagggaaattagccaatggcctctgtcttgcactagtt
gaccggttgtccaaaaagggagatgccaaaggccttcccgttgtcgagtccatcctttcg
caacaggtcttgaacgagcagcaaacggcagttttattcaagtctcttcttttggtggct
cacaagatagatgaccaagtcgatccgcagggcgtcgtgagaaaagtgcttgcgtcaaca
attatcgggcttacacgcaccgaaactaatgctcgtggaatattcaccaaagtcattgct
gacaccgatgttgacgtggatgcgttagagctgaggttggatgctgaaatacggccaaga
acgatcgcgagccacctccaggatgacgtcgttatgaaagacgatgaaaacgagttgcca
gattctgaagacttcagtaccgctctgcagcgagttagcgctttacagaccaagtcgaca
gattcatgtctccaatctctgcgctcggacgtctttgttgacttatgcgctgtatacatc
tcctcattatctcgacctgaggacgttgcatccttcaaacagatggccccattgcaccaa
gatcaagcaaattccaccccgtattactttacattcttcatgcgggtatggtccggccct
tacccaacgcttgctcgagtcggagctctagaaatggccaaggatcgtctaaaacaagga
gactgtgagggcattgatttccaagccgctattccatactgcatcattgctctcaatgat
gcttctaggaaggttcgccgcgctgctgccgatctagtagctgttatagggaatcttctg
gagcaatttgacggcaaatcagaaaactatgtccgctggggccatgatcggatgtatgat
gatatgaaatcggttgagtggatgagctcagaagtcagtcgcaagtttactcgtactatc
ctggttccttctttggaagaccctgcatcgtcagaagcggcggatctcttaaagaatgta
gagctcaacacggatatcctatcattcttcctcgagagtctgcagccgacagcaaagatg
gctaccgaaccatcgccgaacaagcgaagaaggacaagctcttctgaggctcaccgtgga
atcagcacacaggcaaccccagaattagcatcagcattgaaacaggtgacgttcgttcta
cagcttgtcgagggatctaacccggaaagtcacccacaattgcttaatgctcttttcaat
accctctcagaacttcagcacttcagagcgcttgtcggatcagaacttggttacctacaa
aatcttgtcctacggagtttgcttgctatggttcctgcctacaaaaacagcaaagaactc
aagattgatggctccggtgggcatggcgatcttcttgtcaactgtattcaaaaatcatca
agtcctgcagttcagagctcagcacttctccttgtcgctagcctggcgaacgtggctcca
gaactaatcctccacagtgtcatgccgattttcaccttcatgggaagctcagtcctgcga
cagagcgatgattattccgcgcatgtcattaaccagacggtcaaggaggtggtaccacca
ctcatcaaatctctcttgaagggaaagaaagaccctgtagcaggagcttcagagcttcta
ctcagtttcgtaaccgcatatgaacacattccatcacatcggagactagggctgttcata
tctcttgtagagactttggacccagagaagtttctcttcgctgtcttagctatgcttgct
gacaagtacggaatgaccgatcaagtcttgtcattcagcaccgagcttttcaaccatttc
aatattgaaactcagttacaatcattagttagcattctcagtctcattacggatatcttc
aagccgagaccatgtctttcttcagttcttcttgggacgaatgaggacggtgaccgggat
cctcagaaaattgctctacgacagcttaaccttctcccacacattctttcaagtcggaag
ttgaggatacagattagcaagcttgccgaaagggacgatatggaagcttccaaggtacga
gagctgtattcgactctgctagaaaatttgctaggcttagcagattcgttgaagtcacat
aagagcttgtacagccgttgcggtgatgcggtttcgaaactactgaaccttctatcaatc
gtggagtttatcaaggctgtcgagacgctcctagatagaccagatcctatcttacggcgg
aaagtgttgcgcgctgttgagctgcgaatcgaccaggagagtcagggtgatgccaactcg
cgtacggctttgctagcattcctaccacaactcacggccatcatcagggtatctgatgac
actctttacaaacatattgctgtcagttgcgttgacaggattgctgagaagtatggaaag
aaagatccggaggctgtcactgctgctgcggctacgattgcaggtaatcagtgtcttggt
caggatgatgaccgcctacgcgtgatggctcttctctgcttagcatccctagtcgatgtc
ctccaagatggcgtagtccccgttctaccttctgccatccccaagactttggcgtacata
acggaaagcctacgagcaagcaatccccacggggagttacataatgctggctacgccttt
atgacggccctcgcacaatatctcccttacatactttcaggctcttatcttcaacagctt
ctcacggtttccagcatgtctgcgaaggccaatctaaacaccgaagccaacaatgctcgc
ctccagtgtctaaattttcttgccaaacaaattgacgctaaagtcatgttctctgcgctg
gaacaaaactggagcacggcttcaagctccgggttttcggctacacgcgagtatctcgat
acccttggcctaaccattgataagcataagaagaacgttatcgagaagaatgtcacttct
ctgtctgccatcttcctcaatgtctttgatctacgcaggcaagaacgcatcaaagcggtc
agcggcaccgagcccatgaagaacatcaatcgcatcgaggaactcgtgaacggcgtcgcg
ttgaaaatgatctacaaactgaacgacgcggccttccggcctatattcatccggctgatg
gagtgggcctcaacaggcctatccaagaaggacgcggcgggcaccaccctgcggcagctc
agtgtcttcagcttcctgctgtcctttttcgatgccctcaagtccatcgtcaccagctac
gcctcctacatgatcgacgccgccgtcggcatcctcaacagtactataagtggcacaaac
tcgaagggcttctcgtcccccgaagagaaagagctctggcgcaaggtcctccacaccctg
accaagtgcttcgagcacgaccaggacgacttctggcaggctccggcgcacttcgacgca
gtagctccagcattaataggtcaattctccctactcgcggcgtccgcgtcttcttcttct
tccgaagcgccgtcatcatcttccacagcaacagcagagctcgtagcgcaagatctagtc
ccagcgatcgtcgagctcgcgcacgcggccgactccaacgagcaccagaagagcctgaac
ggccagctcctgaaacacctgcgctcggagcacgcggccgtgcggctcgccgccgtccgg
tgcgagcagggcctcacgacccgcctcggcgaggagtggctgtccatgctccccgagatg
ctaccgtatatcagcgagctccaggaggacgacgatgaggatgtcgagcgcgagacgcat
cgctggatcgtggggattgaaggggtgttaggggagagtttggatgctatgctgcagtag
DBGET
integrated database retrieval system
