KEGG   Eutypa lata: UCREL1_1180
Entry
UCREL1_1180       CDS       T03103                                 
Name
(GenBank) putative rna binding protein
  KO
K12881  THO complex subunit 4
Organism
ela  Eutypa lata
Pathway
ela03013  Nucleocytoplasmic transport
ela03015  mRNA surveillance pathway
ela03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ela00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    UCREL1_1180
  09122 Translation
   03013 Nucleocytoplasmic transport
    UCREL1_1180
   03015 mRNA surveillance pathway
    UCREL1_1180
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ela03019]
    UCREL1_1180
   03041 Spliceosome [BR:ela03041]
    UCREL1_1180
Messenger RNA biogenesis [BR:ela03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     UCREL1_1180
    TREX complex
     UCREL1_1180
Spliceosome [BR:ela03041]
 Complex C
  Other components
   EJC/TREX
    UCREL1_1180
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    UCREL1_1180
SSDB
Motif
Pfam: RRM_1 RRM_PARP14_3
Other DBs
NCBI-ProteinID: EMR71770
UniProt: M7TYK8
LinkDB
Position
Unknown
AA seq 340 aa
MDRSLDEIVAESQQGKRNSRPRGRRAGGGGAGGGGGRQQQQPPRERDSYPRDGVRKSTRD
DSRNMDTAWVHDRFEDSHAYNRPRNSRRRESPPPDRHEDNRGTKVKVENLHYDLSKTDLQ
GLFEKIGPVLKIDLVYDRAGRSEGTAFVFYDRREDALEAIREFNGANAKGQPIRLALAAA
APPKRNPFDTAHMPGRSLADRITRPRSLSPPPLRYTDNDRVDRYVPGRGSRSPLPRRRGG
GGGGGGGGGSDRGGGRRPGARREATRQQGQETAAGGQSRGRDGRPRKTAEELDAEMADYF
QPNTGGGGGTAALVAETTEASSTTAAGGQVGGGDDVDMIE
NT seq 1023 nt   +upstreamnt  +downstreamnt
atggatcgcagtctcgacgaaatcgttgctgagtcccagcagggcaagcgaaactccaga
ccccggggacgcagggctggtggcggtggtgcaggtggtggaggtggacgacaacaacaa
caaccaccacgggaacgtgattcttacccccgcgatggcgtaagaaagtctactagagat
gattcgagaaacatggatacggcatgggtccatgataggttcgaggactcgcacgcgtac
aatcgaccccgtaactcgcgaagaagagagtcaccgcctccagacagacatgaggacaac
cgtggcacgaaggtcaaggtcgagaacctacactacgatctctcgaagacggaccttcag
gggctcttcgaaaagataggaccggtcctcaagatcgacctggtatacgaccgcgccggg
cgttctgagggcacagcctttgtcttctacgaccgccgggaggatgcattggaggcgatt
cgcgagtttaatggagcaaatgcgaagggccaacccatccgtctagctctcgcagccgcc
gcccctcccaagcgcaacccattcgacacggcacacatgcccggaagatcgctagcagat
cgcatcacgcggccccgttccctctcgccgccgccgctacggtacaccgacaacgacaga
gtcgaccgctacgtgcccggtagaggatcacgcagtcccttgcctcgtagacggggtggc
ggcggtggcggcggcggtggtggtggtagcgacagaggaggtggaagacgtccgggcgcg
agacgcgaggctaccagacagcagggacaggagacggcggcggggggccagtcccgtggc
cgcgatggacgccccaggaagacggcagaggagctcgacgccgagatggccgattacttc
cagccgaacactggtggtggtggtggtaccgccgctctggtggcggaaactacagaagct
agctctactactgctgccggtggtcaggtgggaggtggagacgacgttgacatgatcgag
taa

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