Eutypa lata: UCREL1_1205
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Entry
UCREL1_1205 CDS
T03103
Name
(GenBank) putative rna polymerase ii largest subunit protein
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
ela
Eutypa lata
Pathway
ela03020
RNA polymerase
ela03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ela00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
UCREL1_1205
09124 Replication and repair
03420 Nucleotide excision repair
UCREL1_1205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ela03021
]
UCREL1_1205
03400 DNA repair and recombination proteins [BR:
ela03400
]
UCREL1_1205
Enzymes [BR:
ela01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
UCREL1_1205
Transcription machinery [BR:
ela03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
UCREL1_1205
DNA repair and recombination proteins [BR:
ela03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
UCREL1_1205
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
GXWXG
Motif
Other DBs
NCBI-ProteinID:
EMR71753
UniProt:
M7T4E7
LinkDB
All DBs
Position
Unknown
AA seq
1584 aa
AA seq
DB search
MIIKEIQFGLLSPEEIKNMSVCRIKYPETMDETRTKPREDGLNDPRLGSVDRQFKCATCG
ESMSECPGHFGHIELAKPVYHPGFIKKIKKVLEVVCHNCSKVLDDRSSPEFAAAVATRDP
KARFQRVWNCCKTKTSCSNEVPKDEDQEYEPGSKPKQKGHGGCGNAQPRVRQTALQLWAT
QSLVSEDNQKTTDKRLITPEMALNILKNISDEDLADMGLNKDYARPEWMIVTVLPVPPPP
VRPSISMDGTGQGLRNEDDLTYKLGDIIRANGNVQQSITQGSPSHICNEYESLLQYHVAT
LMDNDIAGQPQALQKSGRPVKSIRSRLKGKEGRLRGNLMGKRVDFSARTVITGDANISLD
EVGVPRSIARTLTYPETVTPYNISRLHKLVQNGPNEHPGAKYVIRSDGTRIDLRHHKRAG
AISLEYGWKVERHLQDGDYIIFNRQPSLHKESMMGHRVKVMPYSTFRLNLSVTSPYNADF
DGDEMNLHVPQTEETRAEIKELCMVPLNIVSPQRNGPLMGIVQDTLAGVYKMCRRDVFMT
KEAVMNIMLWVPNWDGVIPQPAILKPRPRWTGKQIVSMIIPREISLYTKAKSHPWNPPDD
EGLLVQSGELIFGLLTKKNVGAAGGGIVHLCYNELGPDGAMAFLNGCQRVINYWLLHNGF
SIGIGDTIPDKSTIEKVQGNINEQKQIVTELTVEATANTLECLPGMNIRESFESKVSKAL
NDARERAGNTAEGSLKDLNNAVVMARSGSKGSAINISQMSALVGQQVVEGKRIPFGFKYR
TLPHFTKDDYSPEARGFVENSYLRGLTPTEFYFHAMAGREGLIDTAVKTAETGYIQRRLV
KALEDVSAKYDGTVRNSLGDIIQFLYGEDGLDGQIIEKQVMDQWTIRDADFEGRYRLDVM
AEIPPAALNALEYAQDISGDIEAQKLLDMEFEAIAKDRDFLREFNRGVEKLEDQFQLPFN
IGRLIESSKKLLKLDDAKRSNLTPQDVIPAVKDLLDRMVVVRGPEAVSIEANESSTLLFK
ALLRSRLSFKRLAVEQRLDKLVFRHVLGELESKWQRSFVSPGEMVGVLAAQSIGEPATQM
TLNTFHFTGIAAKNVTLGVPRLKEILNVASNIKTPSMIVYYDGATATKDHAKKLRSVVEH
TNLRSVTTVAEVYYDPDIQATTIPEDADMVESYFLIPDEEHDSIDRQSRWLLRFTLDRQK
LLDKRMTVEDVAKRLKEDYANDLAVIYSDNNAENQVIRVRPMVDDKDGEEKVVEDDVMLK
RLADHLMENLTLRGIKGIEKAFLREGSKIAQDKSGALIQSMGHELCEEWVLDTQGTALRE
VLAVPGVDATRTVTNDLWQIVDAFGIEAARGALLNELRRVLAFDGSYVNERHLALLVDVM
TYRGSIAAVTRHGINRADTGALMRCSFEETVEILLEAAATGELDDCMGISENVMLGQLAP
MGTGHFEVFLDPKMLDTVISDNSRMGLMPGMTIKGNQTEGAATPYDTGSPMADSGYGMSL
ASPSMGMGNFSPIVGTGSDTPAGDFPYITLRWLWWRLLAFVSGHWLLAYLASHRWTLRKF
SSVQPVVALILSKFSPVPGKPDKS
NT seq
4755 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcaaggagattcagttcggtcttttatcacccgaggagataaagaacatgtcc
gtctgtagaatcaagtatcccgagactatggatgagacccggacgaagcctagggaagat
ggtctgaacgacccgcgccttggctctgttgaccgtcaattcaaatgtgctacttgtggc
gaaagcatgtctgaatgtcctggccattttggacacatcgaactggccaaacccgtctat
catcctggattcatcaagaagatcaagaaggtccttgaggtagtctgccacaactgcagt
aaagttctagatgatagaagttcaccagagttcgcagctgctgttgctacccgggatccc
aaggcccgcttccaacgtgtttggaattgctgcaagaccaagacctcctgcagcaatgag
gttcccaaagatgaagatcaagaatacgaaccgggcagcaagccgaagcagaaaggccat
ggcggatgtggcaatgctcaacccagagttcgtcagactgcactacagctctgggctacc
cagtcccttgttagtgaggataatcagaagaccaccgataagcgacttatcaccccggag
atggcactcaatattctgaagaacatctccgatgaagatctcgccgatatgggcctcaac
aaggactatgcccgtcctgagtggatgatcgtcaccgtcttacctgttccacctcctccg
gtccggcccagtatttccatggatggaacaggccaaggtctcagaaacgaagacgatctg
acttacaagcttggtgatatcatccgtgccaatggcaatgttcagcaatccattacccag
ggttctcccagccatatttgcaacgagtacgagtcactcctgcagtatcatgttgccacg
ctgatggacaacgatattgctggtcaaccccaagcactgcagaagagtggccgacctgtc
aagtccatccgatcgcgtttaaagggtaaagaaggcagacttcgtggtaacctgatggga
aagcgtgtggatttctccgcgcgtactgtcattacgggagatgccaacatctcactcgat
gaagttggtgttcctagaagtatcgcgaggactctcacgtatcctgagacagtcacacca
tacaacatctctcgcttgcacaagctcgtgcaaaatggaccgaatgaacatcccggtgcc
aagtacgtcatccgctcggacggtacgagaatcgatcttcgacatcacaagcgtgctgga
gccatatctctggagtacggctggaaggtcgagcgtcatctacaggatggtgattatatc
atcttcaaccggcagccttctttgcacaaagaatccatgatgggtcatcgtgtcaaggtc
atgccttactcgacgtttcgattgaacttgtcggtcacttccccatacaacgccgatttc
gatggtgacgaaatgaacctgcacgtgccacagaccgaggaaactcgtgctgaaatcaag
gaattgtgcatggtacctctcaatatcgtttcccctcagcggaacggaccattaatgggt
attgtccaagatactctggctggtgtgtacaagatgtgccgccgtgatgtctttatgacc
aaagaggcggttatgaacatcatgctctgggtgccgaattgggatggtgtcatcccccaa
cctgcgatccttaagcccagaccccgttggacgggcaagcagatcgttagcatgatcatt
cctcgtgagattagtctttacacgaaagccaagagccatccatggaacccgccagatgat
gagggtttgttagttcaatcgggtgagcttatttttggacttcttaccaagaagaacgtg
ggtgctgcgggtggaggtattgtacatctctgctacaacgagttgggtcccgacggcgcg
atggcttttcttaatgggtgccagcgtgttatcaactactggcttctccacaacggattt
agtatcggtatcggtgacaccattcccgacaagtcgactattgagaaggtgcaggggaac
atcaacgaacagaagcagatcgttaccgagcttacggttgaagcgacggctaatactttg
gaatgccttccgggtatgaacatcagagaaagtttcgagagcaaagtctccaaggcgctc
aacgatgctcgtgagagggcaggtaacacagctgagggtagtcttaaggatctgaacaac
gctgtcgtcatggctcggtctggatccaagggttcagctatcaatatctcccagatgagt
gccctagtcggtcagcaggttgtcgagggcaagcgtattccattcggattcaagtaccgg
acgctaccgcacttcaccaaggatgactactcgcctgaggcacgtggcttcgtcgaaaat
tcttacctaagaggtctgactcccactgagttctacttccacgccatggctggtcgagaa
ggtctgatcgacacggccgtcaagactgcggaaactggatatattcaacgtcgtctggtc
aaggccctcgaagatgtcagcgctaagtatgatggaactgtccgcaattcccttggagat
atcattcagttcctttatggtgaagatggtctcgatggtcaaatcattgagaagcaggtc
atggaccaatggacgattcgggatgcagattttgagggtcgttaccgccttgatgtcatg
gcagagatacccccggctgctttgaacgctctcgagtacgcccaagacatctctggtgat
attgaggctcagaagcttttggacatggagtttgaagcgattgccaaggatcgtgacttc
ctccgtgaattcaatagaggcgttgagaaactggaggaccagtttcagctgccgttcaac
atcggtcggcttattgagtcgtccaagaaactcctcaagttggatgacgcgaagcgaagc
aacctcactccacaagacgtcatcccggcggttaaggacctgctggacaggatggtagtc
gttcgtggtcccgaggcagtttcgatagaagctaacgaaagctccactctgctcttcaaa
gccttgctccgttcacgtttgtctttcaagcgccttgccgttgagcagcgtttggacaag
ttggttttccgccatgtcttaggagaattggagagcaaatggcaacgatcattcgtcagc
cccggcgagatggtgggtgttttggccgcccagtccattggtgaacccgccacacagatg
acactcaacacgttccatttcactggtattgctgccaagaacgtgactctcggtgtccct
cgtttgaaggagattctcaatgttgccagtaatattaaaactccgtccatgattgtctac
tacgacggagccactgcgaccaaggatcatgcaaagaagcttcgaagcgtggtcgaacat
actaatcttcgctctgtgactacggttgccgaggtctattacgaccccgatattcaagct
accacgatccccgaggatgcagacatggtggagtcatacttccttatccctgatgaggag
catgattcgattgacaggcaatcaagatggttgcttcgcttcaccctggaccgacagaag
cttcttgacaagagaatgacagtggaagacgtcgccaagcgcctcaaagaagactatgcc
aacgatcttgccgttatttatagtgataataacgctgagaatcaagtcatccgcgttcgt
cctatggtggatgacaaggatggggaagaaaaggtggtcgaagacgacgtgatgcttaag
cgtcttgcagatcatttgatggaaaatctgaccttgcgtggcataaagggcattgaaaag
gcattcttgcgagagggttccaagatcgcacaagacaagagcggtgcgcttattcagtct
atgggacatgaactttgcgaggaatgggttctcgacacccaaggtacagctctgcgtgaa
gtgttggcggttcctggtgttgatgccacgcgtacggtcaccaacgatctgtggcagatt
gtcgacgcctttggtattgaagctgcacgaggagctctgctgaacgagttgcgaagagtg
ctcgcctttgacggttcgtacgtcaacgagcgacatcttgctcttctagttgacgtcatg
acgtatcgcggcagtattgcagccgtcactcgtcatggtatcaacagggcagatacgggt
gccttgatgaggtgttcgttcgaggagaccgtagagatcttgctcgaggccgccgccacc
ggagaactcgatgattgtatgggtatctctgagaacgttatgctgggtcagctagcccct
atgggcacgggccattttgaggtgttcctcgatcctaagatgctcgacaccgttatctcg
gacaattcgagaatgggcctcatgcctggcatgaccatcaagggcaatcaaaccgagggt
gctgcgacgccctacgacaccggctctcctatggctgattctggatatggcatgtctctg
gcctctccctcgatgggtatgggcaacttctcgcctattgttggaacaggctccgacacc
cccgctggggacttcccctacatcaccttacggtggttatggtggcggttactcgccttc
gtctccgggcattggctactcgcctacctcgcctctcatcggtggacgctacgaaagttc
tcctcggttcagcccgtcgtcgccctcattctctccaagttctccccagttccggggaag
cccgacaagtcctaa
DBGET
integrated database retrieval system
