Eutypa lata: UCREL1_1328
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Entry
UCREL1_1328 CDS
T03103
Name
(GenBank) putative lsm domain-containing protein
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
ela
Eutypa lata
Pathway
ela03018
RNA degradation
ela03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ela00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
UCREL1_1328
09123 Folding, sorting and degradation
03018 RNA degradation
UCREL1_1328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ela03019
]
UCREL1_1328
03041 Spliceosome [BR:
ela03041
]
UCREL1_1328
Messenger RNA biogenesis [BR:
ela03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
UCREL1_1328
mRNA degradation factors
5'-3' decay
Lsm complex
UCREL1_1328
Spliceosome [BR:
ela03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
UCREL1_1328
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Gemin6
KOW7_SPT5
Motif
Other DBs
NCBI-ProteinID:
EMR71629
UniProt:
M7SYG3
LinkDB
All DBs
Position
Unknown
AA seq
99 aa
AA seq
DB search
MSNLHGYVDKKVLIITADSRTLVGKLLSCDQMTNLVLGQTIERVIRDPDDHEDSEEVQLG
LYLVRGDNVCLVGLVDEALDESINWGRVKGSAIGGIKHI
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaccttcatggctacgtagacaagaaggtgttgatcattacggccgattcgcga
accctggtgggcaagctgcttagctgcgatcagatgacaaacctagtacttggccagaca
atcgaacgtgtaattcgcgatcccgacgaccacgaggactccgaagaggtccagcttggt
ttatacctcgtccgaggtgacaatgtttgtctcgtgggacttgtcgacgaagctctagac
gagagtatcaactgggggcgggtcaagggctcggctatcggaggtatcaagcatatataa
DBGET
integrated database retrieval system
