Eutypa lata: UCREL1_3100
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Entry
UCREL1_3100 CDS
T03103
Name
(GenBank) putative atp-dependent rna helicase ded1 protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
ela
Eutypa lata
Brite
KEGG Orthology (KO) [BR:
ela00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ela03019
]
UCREL1_3100
03041 Spliceosome [BR:
ela03041
]
UCREL1_3100
03036 Chromosome and associated proteins [BR:
ela03036
]
UCREL1_3100
Enzymes [BR:
ela01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
UCREL1_3100
Messenger RNA biogenesis [BR:
ela03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
UCREL1_3100
mRNA cycle factors
Common to processing body (P body) and stress granule
UCREL1_3100
Spliceosome [BR:
ela03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
UCREL1_3100
Chromosome and associated proteins [BR:
ela03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
UCREL1_3100
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
EMR69867
UniProt:
M7SZV3
LinkDB
All DBs
Position
Unknown
AA seq
687 aa
AA seq
DB search
MGGLNLGDQQNQPRSYIPPHMRGKMGPGPAPGPVPSPAAVNGLNNSAWAGNNSYDARPAP
GGWAGPNNQDFPPPQQQQQPPPPQQRQGWNNRPAFDRNAYGNPGAGGGAGGGAGGGGGGG
GYARGSGDGQWRDGKHIAGPPNPRMERELFGAPDDPSKQHTGINFEKYDDIPVEASGHDV
PEPVLSFSNPPLDDHLIRNIELAHYKVPTPVQKYSIPIVMGGRDLMACAQTGSGKTGGFL
FPILSQAFLTGPSPVPAGAAGGGYGRQRKAYPTSLILAPTRELVSQIYEESRKFAYRSWV
RPCVVYGGADIGSQLRQIERGCDCLVATPGRLVDLIERGRISLQNIKYLVLDEADRMLDM
GFEPQIRRIVEGEDMPGVQNRQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENI
TQKVEYVEDVDKRSVLLDILHTHGAGLTLIFVETKRMADSLSDFLINQNFPATSIHGDRT
QRERERALEMFRNGRCPILVATAVAARGLDIPNVTHVVNYDLPTDIDDYVHRIGRTGRAG
NTGHSTAFFNRGNRGVVRDLLELLKEANQEVPAFLETIARESSFGGGGGGRGGRSGGRGR
GQNANRDFRKFGGGGGGGGGGSGFGGGFNGPPQGGFSGGYGGGGGGAPQGGSYGGGGAGG
YGGGGAGGYGGGSYGNPSGPGGQASWW
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgggtggtttgaacctgggtgaccagcagaatcaaccccgttcctacatcccccctcat
atgcgaggcaaaatgggcccaggcccggcccccggtcctgtcccctcgcctgctgctgtg
aatggcctgaacaacagtgcttgggctggtaacaacagctacgatgcccgtcctgcccct
ggaggttgggctggacctaacaaccaagacttcccccctccgcagcagcagcagcagccc
ccgccgccgcagcagcgccagggttggaataacagacctgccttcgatcgcaatgcatat
ggcaaccctggtgccggtggtggtgccggtggcggtgccggtggcggcggcggtggtggt
ggctacgccagaggttccggagacggacagtggcgtgacggcaagcacattgctggcccc
ccgaatcctcgcatggagcgtgaattgttcggcgctccggacgacccctcgaagcaacac
acaggaatcaacttcgagaagtacgatgacatccccgtcgaggcttctggtcacgatgtt
cctgagcccgttttgagtttcagcaaccctcccctggatgatcatctcatccgcaacatt
gagctcgcacactacaaagttcccacgcctgttcagaagtattcaatcccgattgtcatg
ggtggtcgtgatttgatggcctgtgcccagactggttccggaaagacaggcggtttcttg
tttcccattctctcccaggccttcttgactggcccgtcacctgttcctgctggtgctgcc
ggtggtggttatggtcgccaacgcaaggcttaccctacttccctgatccttgccccaacg
cgtgagcttgtctctcagatctacgaggagtcccgcaaattcgcttatcgatcctgggtt
cggccctgcgtcgtgtacggtggtgctgatatcggatcccagcttcgccaaatcgagcgt
ggctgtgactgcttggttgctactcctggacgtcttgtcgacctcatagagcgaggccgc
atttctcttcagaacatcaagtatcttgttctcgatgaggctgatcgaatgcttgacatg
gggtttgaaccccagatccgtcgcattgttgagggtgaggacatgcctggcgttcaaaac
cgccagacgctcatgttttcggccacgttcccccgtgatattcagatgctggctcgtgac
ttccttaaggactacgtcttcctttcggttggtcgcgttggctcgacgtccgagaacatt
acccagaaggtcgagtacgtggaagatgtcgacaagcgctctgttttgctggacatcttg
cacactcacggcgccggtctgaccttgatcttcgtggagacgaagcgtatggctgactct
ctgtccgacttcctcatcaaccagaacttccccgctacctccattcacggagaccgtacc
cagcgtgagcgtgagcgcgctttggagatgttccgcaatggccgatgccccatcttggtt
gctacagctgtcgctgctcgtggattagatattcctaatgtcacccatgtcgtcaactat
gatctccccaccgatattgacgactacgttcaccggattggtcgtactggacgtgcaggc
aacactggccactcgaccgccttcttcaatcgcggtaaccgtggtgttgtacgagacctc
ctcgagcttctgaaagaggctaaccaagaggtgccggccttccttgaaaccattgctcgc
gagagctcgtttggtggtggtggcggcggccgaggtggtcgatcgggtggacgaggccgt
gggcagaacgctaaccgcgacttccgcaagtttggtggcggtggtggcggcggcggcggc
ggctctgggttcggtggtggcttcaacggccctccccagggcggattctccggcggctac
ggtggtggcggcggcggcgctccccaaggtggtagctacggcggcggcggcgctggcggt
tatggcggcggcggtgctggtggctacggaggcggcagttatggcaaccctagtggacct
ggcggccaagcctcttggtggtaa
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integrated database retrieval system
