Eutypa lata: UCREL1_3929
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Entry
UCREL1_3929 CDS
T03103
Name
(GenBank) putative pre-mrna-splicing factor rse-1 protein
KO
K12830
splicing factor 3B subunit 3
Organism
ela
Eutypa lata
Pathway
ela03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ela00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
UCREL1_3929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ela03021
]
UCREL1_3929
03041 Spliceosome [BR:
ela03041
]
UCREL1_3929
03036 Chromosome and associated proteins [BR:
ela03036
]
UCREL1_3929
Transcription machinery [BR:
ela03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
UCREL1_3929
Spliceosome [BR:
ela03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
UCREL1_3929
Complex B
UCREL1_3929
Complex C
U2 SnRNP specific factors
UCREL1_3929
Chromosome and associated proteins [BR:
ela03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
UCREL1_3929
TFTC complex
UCREL1_3929
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_EML_2
ANAPC4_WD40
Motif
Other DBs
NCBI-ProteinID:
EMR69044
UniProt:
M7SRD9
LinkDB
All DBs
Position
Unknown
AA seq
1181 aa
AA seq
DB search
MATTSNMFLYSLTVQPPTTVSHAIIGQFSGTKEQQILTVSGSRLTLLRPDPNLGQVITIV
SHDVFSIIRSVVSFRLAGSTKDYIILTTDSGRITVLEFVAARNRFSRLHLETFGKSGVRR
VTPGEYLAADPKGRACLVASIEKNKFIYILNRNVQAELTISSPLEAHRHGTLVLSLIALD
VGYANPVFASLETDYSEMDQDSSGQAFPDVELVYYELDLGLNHVVRKWSEPVDPTSSLLF
QVPGGNDGPSGVLVCAEDTVTYRHSNQETFRVPIPRRRGATENPQRKRSIVSGVTHKLKG
GADTFFFLLQTEDGDIFKVTFNMQEDSDGNLTGEVGRIKIKYFDTIPVSNSLCILKTGFL
FAACEFGNHHFYQFEKLGDDDEELEFTSDDFDPRSPYDPIYFHPRPLENLTLVQSIDSLS
PLLDSKVVNLMEENVPQIYSVCGNGARSRFRMLKHGLQVHEVVASELPGRVSAVWTTKLT
RQDKYDTYIILASSNYTLIMSIGEEVSQVSDSGFLTSVTTLAIQQIGEDSLVQVHPKGIR
HLHNGQINEWPVPQHRSIVATATNEQQIAIALSSGEIVYFEVDSDGTLAEYDEKKEMSGT
VTCLSLGQIPKGRLRSSFLAVGCDDCTVRILSLDPESTLESKSVQALTAAPSALTIMAMD
DPLSDGSGSITCLHIGLHSGVYIRTLLDEITGELTDTRLKFLGPKAIKLFQITIKGQTCV
LALSSKPWVGYIDAARGFMMTPLSYESLDWGWNFSSEQCEEGIIGIYDNYLRIFFVDNLR
DNMIQKSVPLTYTPRQLVKHPDQPYFYTIESENNTLAPQLRAQLLADPSVSNGDAKVLPP
EDFGYPRGHNRWASCINVVEPLGEEPRTLQTIELEDNEAAVSAAVVSFASQDGESFLVVG
TGKDMVLNPRQFSAGFISVYRFREDGKDLEFIHKTKVEEPPMALLPFQGRLAAGIAQAAV
APQLIVSLSTQGSRIIVGDVQQSITMVVYKPNSNSLIPFVDDSIARWTTCTTMVDYETVA
GGDKFGNIWIVRCPENASAEADDPGSEGLLGRDHLHGAPNRLTLMAHFFAQDIPTSIYKT
NLAVGGQDILIWTGLQGTIGMLIPFLAREDADFFQTLETHMRNEDPPLTGRDHLMYRGYY
APVKGVIDGDLCERYTLLPNDKKQMIAGELDRSDARTRSAF
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atggcgactacatctaacatgttcctgtattcgttgacggtccaacccccaaccaccgtc
agtcatgctatcatcggccagttctcaggtaccaaagaacaacagatcctcactgtctca
ggctcacgcttaaccctccttcgtccggatccaaacctgggccaagtcataaccattgtt
tcacacgatgtcttcagtatcatccggtcggttgtctcattccgtcttgctgggagcacc
aaggattatatcatcctaactaccgactcgggtcgcatcactgttctggaatttgtagca
gcccggaaccgcttctctcgcttgcatttggaaacctttggcaagtcaggcgtgcgccgt
gtcactccgggtgagtacctggctgccgaccctaaaggccgagcctgtcttgttgcttct
atagagaagaacaaattcatatatattctgaaccgcaacgtgcaggccgagctcaccata
tcctcgcctctcgaagcgcataggcatggcacccttgtcctgtctttgatagcgctcgat
gtgggctacgcgaatcctgtctttgcctctctggaaacagattactcggagatggaccag
gattcatccggtcaagccttcccagatgtcgagctcgtctattatgagctagacctcgga
ttgaaccacgttgtccgtaaatggtcagaacccgtggatccaacctcttccctactcttc
caagtccccggtggaaacgacggcccaagcggtgtacttgtatgtgcagaggatactgtg
acatatcggcattcgaaccaagaaacgttccgcgtccctattccccgccgacggggtgcc
acggaaaacccacaacggaagcgcagtatcgtttccggggtgacgcataagctgaagggt
ggagcagacaccttctttttcttgttgcaaacagaagacggcgatatcttcaaggtaacc
tttaacatgcaagaagacagcgatgggaaccttactggcgaggtggggcgcatcaaaatc
aaatattttgataccatccccgtttcaaatagtctttgtattctcaagactgggtttctc
ttcgccgcttgcgagtttgggaaccatcacttttaccaattcgaaaagcttggtgacgac
gatgaagaactcgagttcactagcgatgatttcgatccccgcagcccatatgaccctatc
tactttcacccacgacccttggagaatctcaccctagtccaaagcatcgactccctgagc
cccctcctggactccaaagttgtcaatctgatggaagaaaacgtgccacagatctattca
gtgtgcggcaatggtgcgaggagtcgttttcggatgctgaagcacgggttgcaagttcat
gaggttgtcgcttccgagttgcctggtagagtgtcggctgtctggacaacgaaacttaca
agacaagacaaatacgacacatacataattctggcttcgtctaactatactttaattatg
agtatcggagaagaggtcagtcaagttagcgactcgggctttcttacgtcagtgaccacc
ctcgctattcagcagatcggtgaagatagtctcgtacaagttcacccaaaaggcattcgg
catcttcataatgggcagataaacgaatggcccgttccacagcatcgatccattgtggcg
acggctacgaacgagcagcaaatcgccatagccctaagttcaggagagattgtctatttt
gaagtggatagcgatggaaccttagccgagtacgacgagaagaaagagatgtctggtacc
gtcacttgtctcagtctcggccaaatacccaaaggccgtttacgaagttcttttttggca
gtgggatgtgacgactgcaccgttcgaatccttagtttagatccagaatccacgctggag
agtaagtcggtgcaagcgctcacggcggcgccctcggcgctgaccatcatggccatggat
gaccccttatctgacggtagcggctcaataacatgcctacacatcggtctgcactcgggt
gtctatattcgaacacttttggacgagatcacaggagagttgacagatacacgactcaaa
tttcttggcccgaaagctattaagctcttccaaatcacgatcaaagggcaaacatgtgtg
ctggctcttagttccaagccatgggtagggtatatcgatgcagcgagaggtttcatgatg
acacctcttagttatgaaagcctggactggggatggaacttcagcagcgaacaatgtgag
gagggcatcatcggaatttatgataactacctacggatctttttcgtcgacaatcttcgc
gataacatgatccagaagtctgtacctctcacatataccccgcgacagcttgtcaaacac
cctgatcagccctacttctacactattgaatccgaaaacaatacactggccccgcagctc
cgtgcgcagttgttagcagatcccagtgtgtctaatggcgatgccaaggtgctaccgcca
gaagactttgggtatccccgcggacacaacaggtgggcatcctgcattaacgtcgtcgaa
ccgcttggcgaagagccccgaaccctccaaacaattgaacttgaggacaacgaagctgct
gtcagtgcggcagtagtctcctttgctagccaggacggcgagagtttcctggtcgtcggt
actggaaaggacatggttcttaacccgaggcaattctccgctggatttattagtgtttat
cggttccgtgaagacggaaaagacctagagttcatccacaagaccaaggttgaggaaccg
ccgatggcacttttgccctttcagggtcgactggccgctgggatcgcccaagctgccgtt
gcgccacaattaatcgtgtctttatcaacacaaggcagccgtattatcgttggagacgtc
caacagagcataaccatggtggtgtataagccgaactccaattcgcttatccctttcgtc
gacgattcaatcgcgcggtggacaacatgtacgactatggtggattacgaaaccgtcgct
ggtggggacaagttcggtaacatttggatcgtacgctgtcccgagaatgccagcgccgag
gccgacgaccctggttccgagggtcttctgggacgggaccatctccacggcgctccgaac
cgactcactctgatggcgcacttctttgctcaagacattccaactagcatctataagaca
aacctcgccgtcggaggacaggatattcttatatggaccggcttacaggggacaatcgga
atgcttatcccattccttgctcgcgaggacgccgactttttccaaactctggagacgcac
atgcgcaacgaagatcccccgcttacgggccgggaccatctcatgtaccgcggctattac
gcgccggtcaagggtgtaatagacggagatctatgcgagcggtacacgttgcttcccaat
gataagaagcagatgattgctggcgagctcgatcgctcggatgcccggacgcgatctgcc
ttctaa
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