Eutypa lata: UCREL1_4924
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Entry
UCREL1_4924 CDS
T03103
Name
(GenBank) putative atp-dependent rna helicase dhx8 protein
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
ela
Eutypa lata
Pathway
ela03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ela00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
UCREL1_4924
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ela03041
]
UCREL1_4924
Enzymes [BR:
ela01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
UCREL1_4924
Spliceosome [BR:
ela03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
UCREL1_4924
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
WHD_HA2
DEAD
AAA_22
AAA_19
nSTAND3
T2SSE
AAA_30
nSTAND_NTPase5
Cas3-like_C_2
SRP54
ABC_tran
PhoH
AAA_23
Motif
Other DBs
NCBI-ProteinID:
EMR68070
UniProt:
M7TMZ3
LinkDB
All DBs
Position
Unknown
AA seq
956 aa
AA seq
DB search
MIPTANHAMLEVHGDDNYDDRWGDEDEDEEVLSSPPPPDDEPEFKESASKRVKLSRDDHD
GKNRDKGGNDSDSDAARDREEADAFAKRLKERDEERSKKPDNKGNKERQRLAEELSSNRA
AMPDLRQRSRQDYLKKREAERLALLRKQVAEETAELRSGVRLSEKEKAEFAKNREILRLA
EERLRIDDHLDGYYMPEDYITEKGKIDKKRKEEALYKRYVDRDEYGQEKFVTEHEEWERE
QAQKAKAQINRAEREYEGDYDLLLDEDQFIHWSHDTTLAGEGKTLTKEQRFLDAQIEAAE
KKALSIQETRKSLPIFAYRNEFIAALEQHQILIIVGETGSGKTTQLPQYLHEAGYTKDGL
KVGCTQPRRVAAMSVAARVADEMGVKVGNEVGYSIRFEDNTSDKTILKYMTDGMLLREFM
TEPDLAGYSALMIDEAHERTVHTDILLALVKDLSRERPDLKLLISSATMNAEKFATYFDD
APIFNIPGRRYPVDIYYTPAPEANYLAAAITTVFQIHTTQGSGDILVFLTGQDEIEAAEL
ELTETARKLGNRVKELIICPIYANLPSDLQSKIFEPTPPNARKVVLATNIAETSLTIDGI
VYVIDPGYVKENVFNPTTGMSNLIVVPCSRASASQRSGRAGRVGPGKCFRLYTKYAYFNE
MDESTTPEIQRTNLNSIVLLLKSLGINQLLEFEFMDPPPTESLIGALNQLFALQALNHKG
ELTKVGRQMAEFPTDPMLAKAVLAADKFKCVDEVLSIVSMLSEASALFFRPKDKKIHADS
ARNRFTVKEGGDHLTLLNIWNQWVESDFSPVWARENFLQQRSLTRARDVRDQLAKLCERV
EVAPSTCGAANVDPVKKALTAGFFPNAAIMQRDGSSYRTVKNHTTVYLHPSSVLMKSDPP
EKTVIYYELVQTTKEYMRSCMPIERRWLAEVAPHFHKKKDIEDLDDRKKMPKQTGK
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgatacccaccgcaaaccacgccatgctcgaagtccatggcgatgacaattatgatgat
cgttggggcgatgaggacgaggacgaggaggtgttgtcatccccaccaccaccagatgat
gagccggagttcaaagagtcggcttccaagcgcgtcaagttaagtcgcgacgaccatgac
ggcaagaatcgcgataagggtggaaacgattccgattccgatgcggcacgcgatcgagaa
gaagcagatgcttttgctaagcgcctgaaagaacgcgacgaagagagatccaagaaaccc
gataataagggcaacaaggaacgccaacgactggccgaagaactttcctcaaatcgagca
gctatgccagatctgcgtcaacgatcacgccaagactacctcaaaaagcgcgaggcagag
cgattagctctactacggaaacaggtagctgaggagacagcggaactgcgaagtggtgta
cggctatcggaaaaagagaaggcagagttcgcaaagaaccgagaaatcctacggctcgcc
gaagagcgcctacggatagacgatcacctcgatggctactacatgcctgaagattatatc
accgagaaaggaaagatcgataagaaacgcaaagaggaagcactctacaaacgctatgtg
gatagggacgaatatggtcaggagaagttcgtcactgagcacgaagagtgggagagggaa
caggcgcaaaaggcgaaggcgcaaatcaaccgtgccgaacgcgagtacgaaggtgactat
gatctactcctcgatgaagaccaattcatccactggagccacgacacaacgttggctggc
gaaggcaagaccctaactaaggaacaacgattcttggacgctcagatcgaagctgctgaa
aagaaggcgctatcgattcaagagacccgaaagagtctgcctatcttcgcttaccgaaat
gagttcatcgccgctcttgagcagcatcagatccttatcatcgttggtgaaaccggtagc
ggcaagacgacacaactgccacaatatctacatgaggcagggtatacgaaagacggcctg
aaggtcggttgtacccaacccagaagggttgcagccatgagcgtagctgctcgagtggca
gacgaaatgggagtaaaggtcggcaatgaggttggatattctattcgttttgaagacaac
acgagcgacaagacaatactgaagtacatgactgatggtatgttgctacgtgaattcatg
acggaacccgatctcgctggttattcagcattgatgattgacgaggcccacgaaagaact
gttcatacggatatcttgctagccttggttaaggatctatcaagggaacgaccggacttg
aagcttctaatatcctctgctacaatgaatgcggagaaattcgccacctacttcgatgat
gctcctattttcaacattcccggacggagatatcctgtcgatatctactatactccagca
ccagaagcgaactacctagctgctgctatcactactgtcttccaaattcataccactcag
ggtagtggtgatattttggtatttttaacaggtcaagacgagatcgaagcggcagaactg
gaacttacagagaccgcaagaaaattaggcaacagggtcaaagagcttattatatgtcct
atctacgcaaatttgccttccgacttacaatctaaaatattcgaacctactccgcctaac
gcgcgtaaagtcgtactagccacgaacatcgctgagacgagtttaacaatcgacggaatt
gtgtatgttatagatccaggctacgtcaaggagaacgtgttcaacccgacaaccgggatg
tctaacctgatcgtcgttccgtgttctcgagcctctgccagccagcggagcggtagagct
ggtcgtgtagggcctggaaagtgcttccgtctctatacaaagtacgcctacttcaacgag
atggatgagtcgacaacgcccgagatccaacgcaccaacctaaacagtatcgtcttgcta
ttaaaatctctaggcatcaaccaactactcgaatttgagtttatggacccgccgcctaca
gagtccctgatcggagctctgaaccaacttttcgctctccaggcattaaaccacaaggga
gagctgacgaaggtggggcggcagatggccgagttcccgacggacccgatgctcgccaaa
gctgtcctggctgcggacaagttcaagtgcgtcgacgaggtgctctcgatcgtctcgatg
ctcagcgaggcctcggcgctcttcttccggcccaaagacaagaagatccacgcggacagc
gcgcgcaaccgcttcaccgtcaaggagggcggcgaccacctgacgctcctcaacatctgg
aaccagtgggtcgagagcgacttctcgcccgtgtgggcgcgggagaacttcctgcagcag
cggtcgctgacgcgggcgcgcgacgtgcgggaccagctcgcgaagctgtgcgagcgcgtc
gaggtggcgccctccacgtgcggcgccgccaacgtcgacccggtcaagaaggccctcacg
gcgggcttcttccccaacgccgccatcatgcagcgcgacggcagcagctaccgcaccgtc
aagaaccacaccaccgtctacctccaccccagctccgtcctcatgaagtccgaccccccc
gagaagaccgtcatctactacgagctcgtccagaccaccaaggagtacatgcgcagctgc
atgcccatcgagcggcggtggctcgccgaggtcgcgccccacttccacaagaagaaggat
atcgaggatctggatgatcggaagaagatgccgaagcagacgggcaagtga
DBGET
integrated database retrieval system
