Eutypa lata: UCREL1_5001
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Entry
UCREL1_5001 CDS
T03103
Name
(GenBank) putative rhamnogalacturonase b protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
ela
Eutypa lata
Brite
KEGG Orthology (KO) [BR:
ela00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
UCREL1_5001
Enzymes [BR:
ela01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
UCREL1_5001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
Kelch_6
Kelch_1
Motif
Other DBs
NCBI-ProteinID:
EMR67996
UniProt:
M7TDL3
LinkDB
All DBs
Position
Unknown
AA seq
536 aa
AA seq
DB search
MLLQVLFLSILAFASSALAAFGFTKSGSNYVIDAGSSNALVFTVNGGSCDITSIKYRGTE
LQDSSQGTHLSSGLGSATVSVSQVSGSSNYIKITCTTSTLTHYMVVKEGDSTIYLGTYIS
AEPSVGELRFIARLKSSVLPSEYPYGAVSTTSGSSSAVEGSDVYVVGGQTRSKFYSSTRW
IDRDAQCVYGSVSDEIHACTLVSNFESSSGGPFFRDIESNNAGAATNLYWYMNSGHVQTE
SFRTNVLHGPYMLSFSRSGIPKAKDYDTSFFSELSIQGYVATSGRGYVKGTASGVSSSYQ
IVVHWYNSAAQYWTIASSNGAFTSPAMKPGTYTQVLYQTEYKVATVTGVTVSAGSTTTKN
IASTQVSHNSLWKIGDFDGQPTGFLNADKFLRMHPSDSRMSSWGPVTYTVGSSSVGQFPM
AVYQSVNNPVTIKFTLGSAPGAATLRIATTLSFAGSRPQAKVNSWTATAPAAPTKIDSRG
VTRGAYRGNGEVYDVSIPSGTLVSGSNTITITSISGSSGDTYLSPNFIFDAVELFT
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgctgctccaggttctattcttgtcgattctggccttcgcatcgtctgcgttggccgca
ttcgggtttaccaagtccggcagcaattatgtcatcgatgccgggtcttccaacgctttg
gtattcacggtcaacggcggaagctgcgatataacgtcaatcaagtaccgaggaacggag
cttcaggatagttcgcaaggcactcacctctcgtctggccttggctcggccacggtgagc
gtctcacaggtttcagggtcttccaactacatcaagattacttgcaccacgtcaacactc
acccattatatggtcgtcaaggaaggagacagcacaatctacctcgggacctacatcagt
gctgagccttccgtcggtgagctacgcttcatcgcccgcctcaagtcttcggtgttgcca
agcgagtacccatacggcgccgtgtccactacgtcagggagcagttcagccgtcgaaggg
tccgatgtttacgtagtcggcggccagacgcgatccaagttctattcaagcacccgctgg
atcgacagggatgctcagtgtgtttacggcagtgtctcggacgagatccacgcctgcaca
ttggtgtcaaactttgaatcatcatcgggtggacctttcttccgcgacatcgagtccaac
aatgcaggagcagcgacgaatctctactggtacatgaacagcggccatgttcagacagag
tcattccgcacgaatgtcttgcacggaccttacatgttatcattctcgcgatcgggtatt
ccgaaggccaaagattatgatacctcgttcttctcggaacttagcatccaggggtacgtg
gctacatcaggacgtggatacgtcaagggaactgcttccggagtttccagcagctaccag
atcgtagtccactggtataactccgcagcccagtattggacaattgcatcttcgaatggt
gctttcacgtcgcccgcgatgaagccaggcacctatacgcaggtcttgtaccagaccgag
tacaaggttgccactgtgactggtgtcacggtttcggcaggctcgacgacaactaagaac
atcgccagcacgcaagtatcccacaactcgctgtggaagatcggagacttcgacggccaa
cctaccggcttcctcaacgcagacaagttcctccgaatgcacccgtcggacagccgcatg
agcagctgggggcccgtgacgtacacggtcggcagctcctccgtcggccagttccccatg
gccgtctaccagtcggtgaacaaccccgtcaccatcaagttcaccctgggatccgctccg
ggcgccgcgaccctgcgcattgctaccacgctatcgttcgccgggtctcgcccccaggct
aaggtgaactcgtggacggcaacggctccggctgcacccaccaagattgacagccgcggc
gtcactcggggtgcgtatcgtggaaacggggaggtttacgacgtcagcatcccgtctggc
acccttgtttctggttccaacactattaccatcacctccatctcgggtagcagcggtgat
acgtatctcagccccaacttcatcttcgatgcggttgagcttttcacttga
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