Eutypa lata: UCREL1_5105
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Entry
UCREL1_5105 CDS
T03103
Name
(GenBank) putative atp-dependent rna helicase dhx8 protein
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
ela
Eutypa lata
Pathway
ela03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ela00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
UCREL1_5105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ela03041
]
UCREL1_5105
Enzymes [BR:
ela01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
UCREL1_5105
Spliceosome [BR:
ela03041
]
Complex C
Other components
Step II factors
UCREL1_5105
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
WHD_HA2
DEAD
AAA_22
AAA_19
AAA_30
T2SSE
nSTAND3
nSTAND_NTPase5
AAA_16
SRP54
SLFN-g3_helicase
PhoH
ATPase
TsaE
FtsK_SpoIIIE
ABC_tran
AAA_23
Herpes_ori_bp
Motif
Other DBs
NCBI-ProteinID:
EMR67889
UniProt:
M7SNA2
LinkDB
All DBs
Position
Unknown
AA seq
1210 aa
AA seq
DB search
MDDLEELELLSLVSKVTSELQNHLGISEKTLAEFIIFQRLGCSFSEWKTKLADMGGASWP
ESLYDSVDRLVTTMHPKFKGSHNGATGSDDRPTRSQQEKESIFKGLSIPDREVAAQEDAD
AIDDTLALLEGLEGKARDTRVEPERASRKRSRSPDGVDAADSRHRRKERYRSRERRDKDY
GEDDDYKDRKARKERRRRRDDYDDNDGYRSERKERRRRDYNDEDDDRLRRAPEPEVDDSP
VLYKVYDGHVTGIKDFGAFVNLHGVQGKVDGMIHISNLTQGQRVNHPSDLLSKGQSVKVK
VTKLEGNRIGLSMKDVDQETGMDLQPQARIETGANMEALGSRGLGGHVETQLDALSKHAS
QPRQHKKRMTSPERWEIRQLIASGVAKASDYPGLEEDYNATLRGDGEMELEEEVDIEVRE
EEPPFLTGQTKQSLELSPIRVVKAPDGSLNRAAMSGAGIAKERKEMRQQEAEVAEQESKT
DLSQQWQDPMANPDQRRFASDLRNTKANAAKPEAVPEWKRAIAPKDQSFGKRTTMSIKQQ
RESLPVYAFRNQLIDAVKQNQILIVVGETGSGKTTQLTQFLAEAGFTENGVIGCTQPRRV
AAMSVAKRVAEEVGCQLGQEVGYTIRFEDCTSPSTKIKYMTDGMLQREILVDPDLRRYSV
IMLDEAHERTIATDVLFGLLKKTLKQRRPDLKIIVTSATLDAEKFSSYFNECPIFTIPGR
TYPVEILYSREPESDYLDAALVTVMQIHLTEPAGDILLFLTGQEEIDTACEILYERMKAL
GPNVPELLILPIYSALPNEMQSRIFDPAPPGSRKVVLATNIAETSITIDHIYYVIDPGFV
KQNAYDPKLGMDSLVVTPISQAQANQRAGRAGRTGPGKCFRLYTEAAFQTEMLPTSIPEI
QRQNLSMTILMLKAMGINDLIHFDFMDPPPTNTMLTALEELYALSALDDEGLLTRLGRKM
ADFPMEPSLAKVLIAATDLGCSDEILSIVAMLNLQTIFYRPKEKQQQADQKKAKFHDPHG
DHLTLLNVYNAWKQSGFSAPWCFENFIQARSMKRAKDVRDQIIRIMERYRHPIASCGRDT
QKVRQALCAGFFRNAARKDPQEGYKTLIEGTPVYLHPSSALFGKQAEWVIYHTLVLTTKE
YMHCTTSIEPKWLVQAAPTFFKVAPSDRLSKRKKAERIQPLYNKFAGEDDWRLSAQRKTG
RSGGGGGTWG
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atggacgacctcgaggagctcgagctcctatccctcgtctctaaagtcacctcggaactg
caaaatcacttgggcatatcggaaaagaccctcgccgaatttatcatcttccaacggtta
ggatgcagcttctccgaatggaagaccaagctggccgatatgggtggtgccagttggccc
gaaagtttatacgacagtgtcgatcgcttagtaacgacgatgcatccaaagttcaaagga
agccacaacggggcgacaggatcagatgaccgcccgacgcgatcccagcaagagaaagag
tctatcttcaagggcctcagtatcccagaccgggaggtagctgcacaagaagacgcagat
gcgatagacgatacccttgcgctgctggaaggactggagggcaaggcgcgcgacacccga
gtagagcctgaaagagcctcacgaaaacggagtagaagtcccgatggcgtagacgcggca
gactcgagacaccgaaggaaagagaggtatcgctctcgggagcggagagataaggattat
ggcgaggacgatgactacaaagaccgtaaggcgcgtaaagaacggaggagaagacgcgac
gactacgacgataacgacggctatagatctgagcgcaaagagcggaggagacgggattat
aatgacgaagatgacgataggcttcgacgtgcgccagaacccgaggtcgatgattcgccc
gtactatacaaagtctacgatggacatgtcacgggtattaaagattttggtgccttcgtt
aacctacatggcgtccaaggcaaagtggacggaatgattcatatctcaaacctgacacag
ggtcagagggtaaatcacccttcggatcttctttcaaaggggcaaagcgttaaggttaaa
gtcacaaaactcgagggtaataggatagggctgtccatgaaagatgtcgatcaagagaca
ggcatggatctacaacctcaagctcgtatagagacaggtgcaaatatggaggctcttggt
agcagaggccttggtggccatgtagaaacgcagctagacgcgctatctaaacatgctagc
caacctaggcagcataagaagaggatgacatcacctgagcggtgggagattcggcaactt
attgcatctggagtcgctaaagcctcggattacccaggcctcgaggaagattataacgca
accttacgaggagatggagagatggaactagaagaggaggttgatatcgaggtccgagaa
gaggagcctccatttctgaccggtcagacgaagcaatcgttagaactgtcacctatcaga
gttgtaaaggcccccgatggctctctgaatcgtgctgcaatgtcaggcgctggaatagct
aaggaacgaaaggaaatgcgtcaacaggaagccgaagtggccgagcaggagtcgaagaca
gacctttcacaacagtggcaagatccgatggcaaatccggatcagaggaggtttgccagc
gacctgcgcaatacgaaggcgaatgcagcgaaacctgaagccgtcccagaatggaaacgc
gctatagcaccgaaggaccaatcctttggtaaacgtacaactatgtctattaagcaacag
cgggaaagtcttcccgtctacgcctttcggaatcaacttatcgacgccgttaagcaaaac
caaatcctaatcgttgttggagagactggttccggcaagacgacccagctgacgcaattc
ttagctgaagccggattcacggaaaatggggtgataggatgcacgcagccgcgtcgtgta
gcagccatgtccgttgcgaagcgtgttgctgaggaggtcggatgtcagttaggccaggaa
gttggatatacgattcgattcgaggactgcacgagcccatccaccaagatcaagtacatg
accgacggcatgctgcagcgtgagattctggtagaccctgacctgaggagatactcggtc
attatgcttgacgaggcccatgagcgcactatcgcaactgatgtcttatttgggcttttg
aagaagacgctgaagcaaaggaggcctgacctgaaaatcatcgtcacgtcagcgacattg
gatgctgagaagttctcctcgtacttcaacgagtgtcccatttttacgattcccggtaga
acgtacccagtcgagatactctattctcgcgaaccagaatccgactacctcgacgcggct
ctggtgacagtaatgcagatacatctcactgagcccgccggtgacatattactgtttctc
acggggcaggaggagatcgacacggcgtgtgagattctgtacgaacgcatgaaagctttg
ggccccaacgtccctgagcttcttattctccccatatactctgctcttcccaacgaaatg
caatcgaggattttcgaccccgccccccctggtagccggaaggtagtattggctacgaat
atcgctgagacgtccattacgatcgatcatatttactatgtgattgacccaggttttgtg
aagcagaatgcctatgatccaaagctaggcatggactcgctcgtggtaacgccaatttct
caggcacaagctaaccaacgtgccggtcgtgcgggacggacgggtcctggaaagtgcttc
aggctctacaccgaagcagcattccagacggaaatgttgccgacttcaatcccagaaatc
cagcgtcaaaacctgtctatgaccatattgatgcttaaggcaatgggcatcaacgatctc
atccacttcgacttcatggaccctccaccgaccaatacgatgttaacagccctcgaagaa
ctttatgccctttcggctttagatgacgagggtctgctcactcgacttggtcgcaagatg
gccgacttccccatggaaccttccctggcgaaagttctcatcgcagcgactgacctcggc
tgctccgacgagatcctcagcatcgtcgccatgctaaacctgcagacgatcttctaccgg
ccgaaggagaagcagcagcaagcggatcagaagaaggccaagttccacgacccgcacggg
gaccacctcaccctgctgaacgtctacaacgcgtggaagcagagcggcttctcggcgccc
tggtgcttcgagaacttcatccaggcgcggtcgatgaagcgggccaaggacgtgcgcgac
cagatcatccgcatcatggagcggtaccggcacccgatcgcgtcgtgcgggcgcgacacg
cagaaggtgcggcaggcgctgtgcgcgggcttcttccgcaacgcggcgcgcaaggacccc
caggagggctacaagaccctgatcgagggcacccccgtctacctgcaccccagctcggcg
ctgttcggcaagcaggccgagtgggtcatctaccacacgctcgtgctgaccaccaaggag
tacatgcactgcaccaccagcatcgagcccaagtggctcgtccaggccgccccgaccttc
ttcaaggtcgcgccctccgaccgcctcagcaagcgcaagaaggccgagcgcatccagccc
ctctacaacaagttcgcgggcgaggacgactggcggttgagcgcccagcgcaagacgggt
cggtcgggtggaggcggtggtacgtggggttaa
DBGET
integrated database retrieval system
