Eutypa lata: UCREL1_525
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Entry
UCREL1_525 CDS
T03103
Name
(GenBank) putative pre-mrna splicing factor atp-dependent rna helicase prp43 protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
ela
Eutypa lata
Pathway
ela03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ela00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
UCREL1_525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ela03041
]
UCREL1_525
03009 Ribosome biogenesis [BR:
ela03009
]
UCREL1_525
Enzymes [BR:
ela01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
UCREL1_525
Spliceosome [BR:
ela03041
]
Complex A
U2 snRNP components
U2 related factors
UCREL1_525
Complex B
UCREL1_525
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
UCREL1_525
Ribosome biogenesis [BR:
ela03009
]
Eukaryotic type
90S particles
Helicases
UCREL1_525
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_C
AAA_22
HA2_N
SRP54
AAA_19
Flavi_DEAD
AAA_23
T2SSE
ResIII
Pox_I1
Parvo_NS1
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
EMR72418
UniProt:
M7T692
LinkDB
All DBs
Position
Unknown
AA seq
771 aa
AA seq
DB search
MASRKRTSSPTEDDAPIKRIKSEEKPVIKEEENPSKYNPYLAHMEDKKERYSNGHPTGSP
LHDFTRRQTTAKQAFNAENGDNNPFTGEPHSQQYFSILKSRRNLPVHKQRQEFLDLYHKS
QILVFVGETGSGKTTQIPQYVLYDELPHLNRKLVACTQPRRVAAMSVAQRVADEFDVNLG
EEVGYSIRFEDKTSPKTILKYMTDGMLLREAMHDHEMSRYSCIILDEAHERTLATDILMA
LLKKVTNRRPDLKIIVMSATLDAQKFQRYFNDAPLLAVPGRTHPVEIFYTPEPEKDYVEA
AIRTVLQIHAAEDEGDILLFLTGEEEIEDTCRKISLEVDEMIRETDCGPMKVYPLYGTLP
PHQQQKIFEPAPPPQRKGGKPGRKCIISTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIR
VESLLVSAISRASAQQRAGRAGRTKPGKCFRLYTEHAFKQELIPQTYPEILRSNLSNTVL
ELKKLGVEDLVHFDLMDPPAPETMMRALEELNFLACLDDEGDLTDLGSLASEFPLDPTLA
VMVIHSPEFICSNEILSITSLLSVPQIFVRPANKRREADEMKNLFRHPDGDHLTLLNVYH
AFKGVMNRGDDPKKWCHEHYLSYRHLSSADNVRTQLKRIMETHEIDLLSTDFHDKNYYTN
IRRALVAGFFMQVARKENNKIYRTMKDNNQAVMLHPSTVLQTDYEWVVYNEFVLTTKQYI
RTVTGIRPEWLLELAPTYYDVDSWEGQPEIKQALRQISEKKRRRDAMRTGR
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctagaaaacgaacaagctctcctaccgaagatgatgcgcctattaagcgtatc
aagtcggaggagaaacccgtgataaaagaggaagagaacccatccaaatacaatccctac
ctggcgcatatggaggataagaaggaaagatatagcaatggtcatcctacaggatcacca
ttgcacgacttcacccgcaggcaaacaactgcaaagcaggcatttaatgctgagaatggg
gataacaacccttttacaggagagcctcactcgcagcagtacttctctattctgaagtcg
cgccgcaatcttccagttcacaagcagagacaggagtttctcgacctatatcacaaatcc
cagattcttgtcttcgttggtgagactggttccggaaagacgacacagattccacaatat
gtactctacgatgaactacctcaccttaacaggaaactcgtcgcctgtacccaaccccgt
cgagtagctgccatgtccgtcgctcaacgtgtggccgatgaattcgacgtcaacctaggc
gaggaagtcggttacagcattcgtttcgaagacaaaacaagtcctaagaccatactgaag
tacatgacggatggtatgctgcttagagaggctatgcacgaccatgaaatgtctcggtat
agctgcatcattctcgatgaggctcacgagcgtacgttggccacagatatcctaatggcc
ttgctcaagaaagtcacgaacagaaggcccgatctcaagattattgtcatgtctgcgaca
cttgatgcccagaagttccagcgctatttcaacgatgctcccctcctcgccgttccgggt
agaacgcaccctgtcgagatcttctacacccctgagcccgagaaggactacgtagaagct
gccatacgcactgtcctacaaattcatgctgcggaggatgaaggtgacattcttctattc
cttactggagaagaggagatcgaggacacctgccgcaagatttcgctcgaggtcgatgaa
atgatcagagaaaccgactgcggtccgatgaaggtctaccccttatacggaaccttgccc
cctcatcagcagcagaagatatttgagccggccccgccccctcaaaggaagggtggcaaa
ccgggccgcaaatgcatcatctcaacgaatattgctgaaaccagtttgactattgatggt
attgtctatgttgtcgacccaggcttcagcaagcagaagatctataaccctcgaataaga
gtggagtccctgttggtctctgccatctcaagagcatcagcgcagcaacgggctggtcgc
gctggtcgaacgaagcctggtaaatgtttcaggctttacaccgagcatgctttcaagcaa
gaacttattccccaaacatatcctgaaatccttcggtctaatctgtcaaacacggttctt
gaactgaagaagcttggcgtagaggatctcgtccatttcgatttgatggatcctcctgca
cctgagaccatgatgcgagctcttgaggaactcaattttctagcctgtctcgacgatgag
ggagacctgacagatttgggctcactcgcatctgagttcccattagatcctactctagca
gtcatggtgatacacagcccggagttcatttgctccaacgagatactgtcaattacttct
ctcctttcagtccctcagatttttgttcgtcctgccaacaagcgtcgggaagccgacgag
atgaagaatctgtttaggcatcctgatggcgaccatctcacgttattgaatgtctatcat
gctttcaagggagtcatgaaccgaggcgatgatcctaagaagtggtgtcatgaacattac
ctatcatatcgacatctgtctagcgcagacaatgtccgtacgcagctgaaaaggatcatg
gagacgcatgaaattgaccttctcagcactgacttccatgacaagaactactataccaac
attcgccgcgctcttgtcgctggtttcttcatgcaagttgcaaggaaagagaacaacaag
atttaccgaacaatgaaagacaacaaccaagctgtcatgctgcacccgagcacggtgctt
caaaccgactacgaatgggttgtctataatgaatttgtcttgacaactaagcagtacatt
cggacggtcactggtatcagacctgaatggcttctggagctcgcccctacctactatgac
gttgattcctgggagggtcagcctgagatcaagcaggcattgaggcaaatttccgagaag
aagaggcgacgcgatgcaatgagaacaggtcgctaa
DBGET
integrated database retrieval system
