Eutypa lata: UCREL1_6092
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Entry
UCREL1_6092 CDS
T03103
Name
(GenBank) putative atp-dependent rna helicase protein
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
ela
Eutypa lata
Pathway
ela03013
Nucleocytoplasmic transport
ela03015
mRNA surveillance pathway
ela03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ela00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
UCREL1_6092
09122 Translation
03013 Nucleocytoplasmic transport
UCREL1_6092
03015 mRNA surveillance pathway
UCREL1_6092
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ela03019
]
UCREL1_6092
03041 Spliceosome [BR:
ela03041
]
UCREL1_6092
Enzymes [BR:
ela01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
UCREL1_6092
Messenger RNA biogenesis [BR:
ela03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
UCREL1_6092
Spliceosome [BR:
ela03041
]
Complex C
Other components
EJC/TREX
UCREL1_6092
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
UCREL1_6092
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
DUF4844
CMS1
Motif
Other DBs
NCBI-ProteinID:
EMR66917
UniProt:
M7SRP1
LinkDB
All DBs
Position
Unknown
AA seq
433 aa
AA seq
DB search
MSAEEDLIDYSDEELAPNDAAPANGKKADAAASGNSVDKKGSYVGIHSTGFRDFLLKPEL
LRAIADCGFEHPSEVQQNCIPQALLGGDIICQAKSGLGKTAVFVLTTLQQIEPVAGECSV
LVMCHTRELAFQIRNEYNRFSKYMPDIKTGVFYGGTPIQKDAEVLKNKDTHPHIIVGTPG
RLNALIRDKYLRLNSVRIFVLDECDKMLDTTDMRRDVQEIFRTTPMQKQVMMFSATLSDE
IKPICRKFMQNPTEHYVDEDTKLTLHGLQQYYIKLEEREKNRKLNELLDELQFNQVIIFV
KSTVRATELDKLLRECNFPSIAVHSGVSQEERIKRYKEFKDFNKRICVATDVFGRGIDIE
RINLAINYDLPADADSYLHRVGRAGRFGTKGLAISFVSTDGDQEVLKAIEKRFEVALPEF
PKDGIDPGTYMAS
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctgaagaggatctcatcgactactccgacgaggagcttgcgcctaacgatgcc
gcgcctgccaacggaaagaaggccgacgctgccgcttctggcaacagtgttgacaagaag
ggctcgtatgtcggtatccattcgactggtttccgcgactttttattgaagcccgaactt
ctacgcgccattgccgactgcggtttcgaacatccttcggaggtccagcaaaattgtatt
cctcaggctcttctgggaggtgacatcatctgccaagccaagtctggtctcggtaagact
gctgtcttcgtcttgaccacgcttcagcagatcgagcctgttgctggcgagtgctccgtt
ctggtcatgtgccacactcgcgagctggctttccagatccgcaacgagtacaaccgcttc
agcaagtacatgcccgacattaagaccggcgtcttctacggtggcactcccattcagaaa
gatgccgaggttcttaagaacaaggatacccatcctcatatcatcgtcggtactcccggt
cgtctcaacgccttgattcgcgacaagtatctgcgtctcaacagcgtccggatcttcgtg
ctcgatgagtgtgacaagatgctcgatactacagacatgcgacgtgatgtccaggagatc
ttccgcaccactcctatgcagaagcaggtgatgatgttctctgcgactctttccgacgag
atcaagcctatctgccgcaagtttatgcagaacccaacagagcactacgtcgatgaggac
accaagttgacgctgcacggtctgcagcagtactacatcaagctggaggaacgcgagaag
aaccgcaagctcaacgagctccttgatgaacttcaattcaaccaggttatcatctttgtc
aagagcactgtccgcgcgactgagttggataaactcctccgcgagtgcaacttcccgtcc
atcgctgtccactccggtgtcagccaagaggaacgtatcaaacgctacaaggaattcaag
gacttcaacaagcgtatctgtgttgccactgatgtcttcggccgtggtatcgatatcgag
cgtatcaacctggcaatcaactacgatctgcctgccgatgccgattcatacctgcatcgt
gttggtcgtgctggtcgattcggtaccaagggtttggctatctcgtttgtgagcaccgat
ggggaccaagaggttctgaaggctatcgagaagcgctttgaagttgctcttcctgaattc
cccaaggacggaattgaccccggtacctatatggcgtcttag
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integrated database retrieval system
