Eutypa lata: UCREL1_6353
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Entry
UCREL1_6353 CDS
T03103
Name
(GenBank) putative topoisomerase ii protein
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
ela
Eutypa lata
Pathway
ela03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ela00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UCREL1_6353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ela03019
]
UCREL1_6353
Messenger RNA biogenesis [BR:
ela03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
UCREL1_6353
mRNA degradation factors
5'-3' decay
Decapping complex
UCREL1_6353
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-ProteinID:
EMR66670
UniProt:
M7TIY1
LinkDB
All DBs
Position
Unknown
AA seq
828 aa
AA seq
DB search
MSFAHNPAAPGFSQSHDPFADLAGHDNDADALNFDDTYDGLGDQLDETDDAFNDDTFGGD
SGPSTAPVGKDFDFFGQTAQVAGAIEEEHVRFHRTQPAPRSNIAPSQHYDTGYPYQAAQK
PIRSGYEKYKDPEPASDLQIDASIWGVAPKKSSTPAAAPFQAQPAAAPLPAIGRKMMSLE
EVEAAMRARSKPAAVPAHQLQPQPQAEPVFSTPEPQLPPQPVQYPHQESADYRQSPGFQP
SDAYRNAQGGPHGHPVTILQRPSRDTPPIGPGTASPMPQQQHVTPVVAPTQILQNPNRAS
GDGARAGIPVHSAHRSQDSFSRRSQVMNQQPPQLPQLSEEDKAAYLEAEARRAKRNHKIF
VLSKDNGLMTPQDKSFITRIQLQQLVTAIGDPSEHDTDAVLAEDFYYQVLSSLRVGQRPH
PNQPLNNFAQTYLYQTGSRHAGLRRHGRGPENHMQRMEQQVQRAVEAAKNKPKNKQLVIE
GSLGKISFSNTKTPKPLLNLKRTESGTDANRPSSSHRPPTVAKTTDKKATLKNIESVYQA
LMKMEDLTRKMPPAPPPNGNPSQEFVERQAELQTLNERLWDDLKVHEPIGATVVHPFIAF
LSYPKGKKAIPRVFRFLTHEQRTTILTIIVIHLDQLDVVRDTQVHTGEQIPLNAAARESI
ELFTMAVTPSLLQVLIDSELPIITAVLGLMVQNLSIDKVARTRVGISMFTMILSRAELIK
QTLTSSDPTWQQWTATFNHFFNALEGTLPSIFPGTVTSGEDIYVWQFLATLSVHANPQEQ
QRLVLAVKDRVMDTVSIAKTLPADMAKERLDSVNLFMVAIGLDVELLK
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcgctcacaacccggccgctcctggcttcagccagtctcacgatcctttcgca
gaccttgctggtcatgataacgatgcggacgctctgaatttcgacgatacgtatgatggc
cttggtgatcaactagacgagacggatgacgctttcaatgatgacacattcggaggcgac
agtggcccttctactgctcccgttggaaaggatttcgacttcttcggccagacagctcaa
gtagctggggccatcgaagaggagcatgttcgctttcatcgcacacaacccgcgccgagg
tcaaacattgcgccatcacaacactacgacacgggctacccctaccaggcagctcaaaag
ccgatacgatctgggtatgaaaaatacaaagaccccgagccagcttcagaccttcaaatc
gacgcctcaatatggggtgttgcgccgaaaaagtcatccaccccggctgccgcacctttc
caagcacagcccgcagctgcccctctcccagccataggacggaagatgatgagcttggag
gaagtcgaagctgccatgcgagctagatccaagccagcagcggtaccagcacatcagctt
caacctcagccccaggcagaaccggttttcagcacgcccgaaccccaactacctcctcag
cctgtccagtatcctcatcaagagagcgctgactaccgacagtctccgggattccagccc
agtgatgcttaccgaaatgcccagggtggtccacacggacacccggtcaccatcctccag
cgcccgtcgagagataccccacctatcggtcctggcacggccagccctatgcctcaacag
cagcatgttactcccgtagttgcgccgactcagattttacagaaccccaatcgcgcgtct
ggagatggcgccagggcgggaataccagtccactcagcccatcgatcccaggactcattc
tcgcgacggtctcaggtgatgaatcagcagccgcctcaactacctcaattatcagaagaa
gacaaggctgcatacctcgaagctgaggcgagacgcgccaagcgtaaccacaagattttt
gttttgtcgaaggataatggattaatgactccgcaagacaagagtttcattaccaggatc
caacttcagcaacttgtcacggcgattggcgacccgagtgagcatgacactgatgctgtt
ctggccgaggacttctactatcaagtcctaagctcgcttagagtgggacagcgacctcac
ccaaaccagcccctcaacaattttgcccaaacctacctataccagacaggtagtcgacat
gctggcttgcgacgacacggacgaggaccggagaaccacatgcaacggatggagcaacag
gttcagcgtgctgtcgaggcagcgaagaataagcccaagaataagcaacttgtcatcgag
ggtagtcttggcaagatctctttcagcaataccaaaacgccaaagcctctcctgaacctt
aagcgcaccgagagtggaacagatgccaatcgccccagcagttctcaccgccctccgaca
gtggctaagaccactgacaagaaggcgactctgaagaacattgagagcgtttatcaggct
ctaatgaagatggaagaccttacgcgcaagatgcctccagcacctccacccaatggtaac
ccgagccaggaattcgttgagcgccaggctgagttgcagactctcaatgagcgtctatgg
gatgacctgaaggtccacgagcctattggggctactgtggtgcaccccttcattgccttc
ttatcttacccgaagggcaagaaagcgatcccgcgcgttttccgtttccttactcatgag
caacgcaccactatcctgaccatcattgtcattcatctcgatcagcttgatgtcgtccga
gacactcaagttcataccggagaacagatccctctcaatgccgccgctcgtgaaagcatc
gaactattcaccatggcggttaccccaagtctgttgcaggtgttgatcgactcagaactc
cctatcattacagccgttctcggtctcatggttcaaaacctcagtattgacaaggttgcg
cggacccgggttggaatctcgatgttcaccatgattctcagccgcgctgagctcataaag
cagactctgacaagcagtgaccctacttggcagcaatggaccgctactttcaaccacttt
ttcaacgctctggagggaaccttacccagcatcttccctggcacggtaacttcaggagaa
gacatatacgtgtggcaattccttgcaaccctcagcgtccacgcaaaccctcaagaacag
cagcgtctggtgcttgctgtgaaggaccgtgtcatggatactgttagtatcgcgaagact
ttgccggctgatatggcaaaggaacgtctcgacagtgtcaaccttttcatggtggccatt
ggcctagatgttgaactgctgaaatag
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integrated database retrieval system
